RNA–Protein interactions for RNA: ENST00000289488.6

LRTOMT-201, Transcript of leucine rich transmembrane and O-methyltransferase domain containing, humanhuman

TSL 1 (best) BASIC

Gene LRTOMT, Length 2,332 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRTOMT-201ENST00000289488 REPS2Q8NFH8 660 aa10.92□□□□□ -0.66
LRTOMT-201ENST00000289488 ASCC2Q9H1I8 757 aaPredicted RBP10.92□□□□□ -0.66
LRTOMT-201ENST00000289488 PASKQ96RG2 1323 aa10.92□□□□□ -0.66
LRTOMT-201ENST00000289488 TUBB4AP04350 444 aa10.91□□□□□ -0.66
LRTOMT-201ENST00000289488 TPM4P67936 248 aa10.91□□□□□ -0.66
LRTOMT-201ENST00000289488 FKBP1BP68106 108 aa10.91□□□□□ -0.66
LRTOMT-201ENST00000289488 PTGDRQ13258 359 aa10.91□□□□□ -0.66
LRTOMT-201ENST00000289488 SNAPC2Q13487 334 aa10.91□□□□□ -0.66
LRTOMT-201ENST00000289488 NONOQ15233 471 aaKnown RBP eCLIP10.91□□□□□ -0.66
LRTOMT-201ENST00000289488 SNRNP48Q6IEG0 339 aaKnown RBP10.91□□□□□ -0.66
LRTOMT-201ENST00000289488 FILIP1Q7Z7B0 1213 aa10.91□□□□□ -0.66
LRTOMT-201ENST00000289488 PROCA1Q8NCQ7 364 aaPredicted RBP10.91□□□□□ -0.66
LRTOMT-201ENST00000289488 CLEC4DQ8WXI8 215 aa10.91□□□□□ -0.66
LRTOMT-201ENST00000289488 GJA10Q969M2 543 aa10.91□□□□□ -0.66
LRTOMT-201ENST00000289488 TXNRD2Q9NNW7 524 aa10.91□□□□□ -0.66
LRTOMT-201ENST00000289488 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.91□□□□□ -0.66
LRTOMT-201ENST00000289488 BTBD7Q9P203 1132 aa10.91□□□□□ -0.66
LRTOMT-201ENST00000289488 ADAMTS5Q9UNA0 930 aa10.91□□□□□ -0.66
LRTOMT-201ENST00000289488 BECN2A8MW95 431 aa10.91□□□□□ -0.66
LRTOMT-201ENST00000289488 CCNT1O60563 726 aaKnown RBP10.91□□□□□ -0.66
LRTOMT-201ENST00000289488 ZBED4O75132 1171 aa10.91□□□□□ -0.66
LRTOMT-201ENST00000289488 ZRANB2O95218 330 aaKnown RBP eCLIP10.91□□□□□ -0.66
LRTOMT-201ENST00000289488 TDP2O95551 362 aa10.91□□□□□ -0.66
LRTOMT-201ENST00000289488 KCNJ6P48051 423 aa10.91□□□□□ -0.66
LRTOMT-201ENST00000289488 ATL3Q6DD88 541 aa10.91□□□□□ -0.66
LRTOMT-201ENST00000289488 TXLNBQ8N3L3 684 aa10.91□□□□□ -0.66
LRTOMT-201ENST00000289488 PAGR1Q9BTK6 254 aa10.91□□□□□ -0.66
LRTOMT-201ENST00000289488 TMEM60Q9H2L4 133 aa10.91□□□□□ -0.66
LRTOMT-201ENST00000289488 GOLPH3LQ9H4A5 285 aa10.91□□□□□ -0.66
LRTOMT-201ENST00000289488 ARGLU1Q9NWB6 273 aaPredicted RBP10.91□□□□□ -0.66
LRTOMT-201ENST00000289488 HOXC10Q9NYD6 342 aa10.91□□□□□ -0.66
LRTOMT-201ENST00000289488 COL20A1Q9P218 1284 aa10.91□□□□□ -0.66
LRTOMT-201ENST00000289488 AGTPBP1Q9UPW5 1226 aa10.91□□□□□ -0.66
LRTOMT-201ENST00000289488 CTDP1Q9Y5B0 961 aaPredicted RBP10.91□□□□□ -0.66
LRTOMT-201ENST00000289488 CCL15-CCL14A0A0B4J2E2 113 aa10.9□□□□□ -0.66
LRTOMT-201ENST00000289488 YEATS4O95619 227 aa10.9□□□□□ -0.66
LRTOMT-201ENST00000289488 HOXA7P31268 230 aaPredicted RBP10.9□□□□□ -0.66
LRTOMT-201ENST00000289488 ZNF157P51786 506 aaPredicted RBP10.9□□□□□ -0.66
LRTOMT-201ENST00000289488 IRX3P78415 501 aaPredicted RBP10.9□□□□□ -0.66
LRTOMT-201ENST00000289488 GRM1Q13255 1194 aa10.9□□□□□ -0.66
LRTOMT-201ENST00000289488 CCL15Q16663 113 aa10.9□□□□□ -0.66
LRTOMT-201ENST00000289488 AXDND1Q5T1B0 1012 aaPredicted RBP10.9□□□□□ -0.66
LRTOMT-201ENST00000289488 SPRYD7Q5W111 196 aa10.9□□□□□ -0.66
LRTOMT-201ENST00000289488 KRT25Q7Z3Z0 450 aa10.9□□□□□ -0.66
LRTOMT-201ENST00000289488 DHX40Q8IX18 779 aaKnown RBP10.9□□□□□ -0.66
LRTOMT-201ENST00000289488 BRI3BPQ8WY22 251 aa10.9□□□□□ -0.66
LRTOMT-201ENST00000289488 PPP1R13BQ96KQ4 1090 aa10.9□□□□□ -0.66
LRTOMT-201ENST00000289488 TRERF1Q96PN7 1200 aa10.9□□□□□ -0.66
LRTOMT-201ENST00000289488 PTPN18Q99952 460 aa10.9□□□□□ -0.66
LRTOMT-201ENST00000289488 IMPACTQ9P2X3 320 aa10.9□□□□□ -0.66
LRTOMT-201ENST00000289488 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP10.9□□□□□ -0.66
LRTOMT-201ENST00000289488 A0A1B0GVL5 298 aa10.9□□□□□ -0.67
LRTOMT-201ENST00000289488 SLC37A4O43826 429 aa10.9□□□□□ -0.67
LRTOMT-201ENST00000289488 HERVK_113P62684 666 aa10.9□□□□□ -0.67
LRTOMT-201ENST00000289488 IL17AQ16552 155 aa10.9□□□□□ -0.67
LRTOMT-201ENST00000289488 ARHGAP29Q52LW3 1261 aa10.9□□□□□ -0.67
LRTOMT-201ENST00000289488 USP49Q70CQ1 688 aa10.9□□□□□ -0.67
LRTOMT-201ENST00000289488 NEK8Q86SG6 692 aa10.9□□□□□ -0.67
LRTOMT-201ENST00000289488 PLCD3Q8N3E9 789 aa10.9□□□□□ -0.67
LRTOMT-201ENST00000289488 CYP2W1Q8TAV3 490 aa10.9□□□□□ -0.67
LRTOMT-201ENST00000289488 KCNG4Q8TDN1 519 aa10.9□□□□□ -0.67
LRTOMT-201ENST00000289488 ANO3Q9BYT9 981 aa10.9□□□□□ -0.67
LRTOMT-201ENST00000289488 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.89□□□□□ -0.67
LRTOMT-201ENST00000289488 BTBD19C9JJ37 291 aa10.89□□□□□ -0.67
LRTOMT-201ENST00000289488 CDC25AP30304 524 aa10.89□□□□□ -0.67
LRTOMT-201ENST00000289488 Q3C1V9 767 aa10.89□□□□□ -0.67
LRTOMT-201ENST00000289488 E4F1Q66K89 784 aaPredicted RBP10.89□□□□□ -0.67
LRTOMT-201ENST00000289488 TMCO3Q6UWJ1 677 aa10.89□□□□□ -0.67
LRTOMT-201ENST00000289488 NSMFQ6X4W1 530 aa10.89□□□□□ -0.67
LRTOMT-201ENST00000289488 SLC30A10Q6XR72 485 aa10.89□□□□□ -0.67
LRTOMT-201ENST00000289488 POTEDQ86YR6 584 aa10.89□□□□□ -0.67
LRTOMT-201ENST00000289488 FAM177A1Q8N128 213 aaPredicted RBP10.89□□□□□ -0.67
LRTOMT-201ENST00000289488 C4orf32Q8N8J7 132 aa10.89□□□□□ -0.67
LRTOMT-201ENST00000289488 ZNF784Q8NCA9 323 aaPredicted RBP10.89□□□□□ -0.67
LRTOMT-201ENST00000289488 CCDC150Q8NCX0 1101 aa10.89□□□□□ -0.67
LRTOMT-201ENST00000289488 LRRN4CLQ8ND94 238 aa10.89□□□□□ -0.67
LRTOMT-201ENST00000289488 ANO10Q9NW15 660 aa10.89□□□□□ -0.67
LRTOMT-201ENST00000289488 FBXO2Q9UK22 296 aaPredicted RBP10.89□□□□□ -0.67
LRTOMT-201ENST00000289488 MRPL11Q9Y3B7 192 aaKnown RBP10.89□□□□□ -0.67
LRTOMT-201ENST00000289488 ABCB11O95342 1321 aa10.89□□□□□ -0.67
LRTOMT-201ENST00000289488 SPDYE3A6NKU9 549 aa10.89□□□□□ -0.67
LRTOMT-201ENST00000289488 GCOM1H8Y6P7 765 aaPredicted RBP10.89□□□□□ -0.67
LRTOMT-201ENST00000289488 PDHXO00330 501 aa10.89□□□□□ -0.67
LRTOMT-201ENST00000289488 ATP8B1O43520 1251 aa10.89□□□□□ -0.67
LRTOMT-201ENST00000289488 ECM2O94769 699 aaPredicted RBP10.89□□□□□ -0.67
LRTOMT-201ENST00000289488 POLR2MP0CAP2 368 aa10.89□□□□□ -0.67
LRTOMT-201ENST00000289488 STAT3P40763 770 aa10.89□□□□□ -0.67
LRTOMT-201ENST00000289488 RPS6P62753 249 aaKnown RBP10.89□□□□□ -0.67
LRTOMT-201ENST00000289488 SHC4Q6S5L8 630 aa10.89□□□□□ -0.67
LRTOMT-201ENST00000289488 LBX2Q6XYB7 198 aa10.89□□□□□ -0.67
LRTOMT-201ENST00000289488 SYT10Q6XYQ8 523 aa10.89□□□□□ -0.67
LRTOMT-201ENST00000289488 FASTKD5Q7L8L6 764 aaKnown RBP10.89□□□□□ -0.67
LRTOMT-201ENST00000289488 CCAR1Q8IX12 1150 aaKnown RBP10.89□□□□□ -0.67
LRTOMT-201ENST00000289488 ZIC5Q96T25 663 aa10.89□□□□□ -0.67
LRTOMT-201ENST00000289488 TEX13BQ9BXU2 312 aa10.89□□□□□ -0.67
LRTOMT-201ENST00000289488 RNF146Q9NTX7 359 aa10.89□□□□□ -0.67
LRTOMT-201ENST00000289488 ABT1Q9ULW3 272 aaKnown RBP10.89□□□□□ -0.67
LRTOMT-201ENST00000289488 DOCK3Q8IZD9 2030 aa10.88□□□□□ -0.67
LRTOMT-201ENST00000289488 VWA3AA6NCI4 1184 aa10.88□□□□□ -0.67
LRTOMT-201ENST00000289488 PIK3CDO00329 1044 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms