RNA–Protein interactions for RNA: ENST00000288344.14

HMGN1-201, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 1,303 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-201ENST00000288344 AKR1A1P14550 325 aa10.61□□□□□ -0.71
HMGN1-201ENST00000288344 SMPD1P17405 629 aa10.61□□□□□ -0.71
HMGN1-201ENST00000288344 CASTP20810 708 aaKnown RBP10.61□□□□□ -0.71
HMGN1-201ENST00000288344 PSMA5P28066 241 aa10.61□□□□□ -0.71
HMGN1-201ENST00000288344 CST5P28325 142 aaPredicted RBP10.61□□□□□ -0.71
HMGN1-201ENST00000288344 KIF5BP33176 963 aa10.61□□□□□ -0.71
HMGN1-201ENST00000288344 GJA9P57773 515 aa10.61□□□□□ -0.71
HMGN1-201ENST00000288344 APOBRQ0VD83 1088 aa10.61□□□□□ -0.71
HMGN1-201ENST00000288344 PTGDRQ13258 359 aa10.61□□□□□ -0.71
HMGN1-201ENST00000288344 PKN1Q16512 942 aa10.61□□□□□ -0.71
HMGN1-201ENST00000288344 C1orf53Q5VUE5 145 aa10.61□□□□□ -0.71
HMGN1-201ENST00000288344 IQSEC1Q6DN90 963 aa10.61□□□□□ -0.71
HMGN1-201ENST00000288344 NECAB2Q7Z6G3 386 aa10.61□□□□□ -0.71
HMGN1-201ENST00000288344 VSIG10LQ86VR7 867 aa10.61□□□□□ -0.71
HMGN1-201ENST00000288344 MCF2L2Q86YR7 1114 aa10.61□□□□□ -0.71
HMGN1-201ENST00000288344 RAB11FIP4Q86YS3 637 aa10.61□□□□□ -0.71
HMGN1-201ENST00000288344 CTCFLQ8NI51 663 aaPredicted RBP10.61□□□□□ -0.71
HMGN1-201ENST00000288344 LENG1Q96BZ8 264 aaPredicted RBP10.61□□□□□ -0.71
HMGN1-201ENST00000288344 PRO3102Q9H379 93 aa10.61□□□□□ -0.71
HMGN1-201ENST00000288344 PCDH10Q9P2E7 1040 aa10.61□□□□□ -0.71
HMGN1-201ENST00000288344 FAM184BQ9ULE4 1060 aa10.61□□□□□ -0.71
HMGN1-201ENST00000288344 ISY1Q9ULR0 285 aaKnown RBP10.61□□□□□ -0.71
HMGN1-201ENST00000288344 Q9Y3F1 56 aa10.61□□□□□ -0.71
HMGN1-201ENST00000288344 KIAA1217Q5T5P2 1943 aa10.61□□□□□ -0.71
HMGN1-201ENST00000288344 KLF18A0A0U1RQI7 1052 aa10.6□□□□□ -0.71
HMGN1-201ENST00000288344 CALML3P27482 149 aa10.6□□□□□ -0.71
HMGN1-201ENST00000288344 CNGA1P29973 690 aa10.6□□□□□ -0.71
HMGN1-201ENST00000288344 ADCYAP1R1P41586 468 aa10.6□□□□□ -0.71
HMGN1-201ENST00000288344 BRF1Q92994 677 aa10.6□□□□□ -0.71
HMGN1-201ENST00000288344 ZNF274Q96GC6 653 aaPredicted RBP10.6□□□□□ -0.71
HMGN1-201ENST00000288344 IWS1Q96ST2 819 aa10.6□□□□□ -0.71
HMGN1-201ENST00000288344 VTA1Q9NP79 307 aa10.6□□□□□ -0.71
HMGN1-201ENST00000288344 NPDC1Q9NQX5 325 aaPredicted RBP10.6□□□□□ -0.71
HMGN1-201ENST00000288344 PXMP2Q9NR77 195 aa10.6□□□□□ -0.71
HMGN1-201ENST00000288344 ADD3Q9UEY8 706 aaKnown RBP10.6□□□□□ -0.71
HMGN1-201ENST00000288344 PHF24Q9UPV7 400 aa10.6□□□□□ -0.71
HMGN1-201ENST00000288344 CNPY2Q9Y2B0 182 aa10.6□□□□□ -0.71
HMGN1-201ENST00000288344 PCDHGA4Q9Y5G9 962 aa10.6□□□□□ -0.71
HMGN1-201ENST00000288344 hCG_1642624A0A1W2PR95 340 aa10.59□□□□□ -0.71
HMGN1-201ENST00000288344 PTPDC1A2A3K4 754 aa10.59□□□□□ -0.71
HMGN1-201ENST00000288344 ADAMTS3O15072 1205 aa10.59□□□□□ -0.71
HMGN1-201ENST00000288344 EDIL3O43854 480 aa10.59□□□□□ -0.71
HMGN1-201ENST00000288344 ARIH2O95376 493 aa10.59□□□□□ -0.71
HMGN1-201ENST00000288344 PGK1P00558 417 aa10.59□□□□□ -0.71
HMGN1-201ENST00000288344 CDK7P50613 346 aa10.59□□□□□ -0.71
HMGN1-201ENST00000288344 MRPS9P82933 396 aaKnown RBP10.59□□□□□ -0.71
HMGN1-201ENST00000288344 HIC1Q14526 733 aa10.59□□□□□ -0.71
HMGN1-201ENST00000288344 RTN1Q16799 776 aa10.59□□□□□ -0.71
HMGN1-201ENST00000288344 LRRC26Q2I0M4 334 aa10.59□□□□□ -0.71
HMGN1-201ENST00000288344 DUSP28Q4G0W2 176 aa10.59□□□□□ -0.71
HMGN1-201ENST00000288344 GJC2Q5T442 439 aaPredicted RBP10.59□□□□□ -0.71
HMGN1-201ENST00000288344 NFXL1Q6ZNB6 911 aa10.59□□□□□ -0.71
HMGN1-201ENST00000288344 MICU3Q86XE3 530 aa10.59□□□□□ -0.71
HMGN1-201ENST00000288344 HOMER1Q86YM7 354 aa10.59□□□□□ -0.71
HMGN1-201ENST00000288344 ARRDC4Q8NCT1 418 aa10.59□□□□□ -0.71
HMGN1-201ENST00000288344 IL27Q8NEV9 243 aa10.59□□□□□ -0.71
HMGN1-201ENST00000288344 IL31RAQ8NI17 732 aa10.59□□□□□ -0.71
HMGN1-201ENST00000288344 NSUN6Q8TEA1 469 aaKnown RBP10.59□□□□□ -0.71
HMGN1-201ENST00000288344 PDCD2LQ9BRP1 358 aa10.59□□□□□ -0.71
HMGN1-201ENST00000288344 TSEN34Q9BSV6 310 aaKnown RBP10.59□□□□□ -0.71
HMGN1-201ENST00000288344 UPF3BQ9BZI7 483 aaKnown RBP10.59□□□□□ -0.71
HMGN1-201ENST00000288344 C11orf49Q9H6J7 331 aa10.59□□□□□ -0.71
HMGN1-201ENST00000288344 RBM28Q9NW13 759 aaKnown RBP10.59□□□□□ -0.71
HMGN1-201ENST00000288344 CYP46A1Q9Y6A2 500 aa10.59□□□□□ -0.71
HMGN1-201ENST00000288344 V9GY48 417 aaPredicted RBP10.59□□□□□ -0.71
HMGN1-201ENST00000288344 GRIN2DO15399 1336 aa10.59□□□□□ -0.71
HMGN1-201ENST00000288344 SYNRGQ9UMZ2 1314 aa10.59□□□□□ -0.71
HMGN1-201ENST00000288344 PRPF3O43395 683 aaKnown RBP10.58□□□□□ -0.71
HMGN1-201ENST00000288344 CFBP00751 764 aa10.58□□□□□ -0.71
HMGN1-201ENST00000288344 NR3C2P08235 984 aa10.58□□□□□ -0.71
HMGN1-201ENST00000288344 RARBP10826 455 aa10.58□□□□□ -0.71
HMGN1-201ENST00000288344 HOXA13P31271 388 aaPredicted RBP10.58□□□□□ -0.71
HMGN1-201ENST00000288344 CLK2P49760 499 aaKnown RBP10.58□□□□□ -0.71
HMGN1-201ENST00000288344 TNFAIP2Q03169 654 aa10.58□□□□□ -0.71
HMGN1-201ENST00000288344 TRAF1Q13077 416 aa10.58□□□□□ -0.71
HMGN1-201ENST00000288344 SLC39A5Q6ZMH5 540 aa10.58□□□□□ -0.71
HMGN1-201ENST00000288344 TEX2Q8IWB9 1127 aa10.58□□□□□ -0.71
HMGN1-201ENST00000288344 FBXO16Q8IX29 292 aaPredicted RBP10.58□□□□□ -0.71
HMGN1-201ENST00000288344 CCDC82Q8N4S0 544 aa10.58□□□□□ -0.71
HMGN1-201ENST00000288344 SLC43A3Q8NBI5 491 aa10.58□□□□□ -0.71
HMGN1-201ENST00000288344 CRYGNQ8WXF5 182 aa10.58□□□□□ -0.71
HMGN1-201ENST00000288344 KHSRPQ92945 711 aaKnown RBP eCLIP10.58□□□□□ -0.711e-7■■□□□ 13.3
HMGN1-201ENST00000288344 RRP36Q96EU6 259 aaKnown RBP10.58□□□□□ -0.71
HMGN1-201ENST00000288344 HS3ST6Q96QI5 342 aa10.58□□□□□ -0.71
HMGN1-201ENST00000288344 RMDN3Q96TC7 470 aa10.58□□□□□ -0.71
HMGN1-201ENST00000288344 XPNPEP3Q9NQH7 507 aa10.58□□□□□ -0.71
HMGN1-201ENST00000288344 A6NJR5 290 aa10.58□□□□□ -0.72
HMGN1-201ENST00000288344 STXBP3O00186 592 aa10.58□□□□□ -0.72
HMGN1-201ENST00000288344 EIF3JO75822 258 aaKnown RBP10.58□□□□□ -0.72
HMGN1-201ENST00000288344 IFNAR1P17181 557 aa10.58□□□□□ -0.72
HMGN1-201ENST00000288344 RBM25P49756 843 aaKnown RBP10.58□□□□□ -0.72
HMGN1-201ENST00000288344 SP2Q02086 613 aa10.58□□□□□ -0.72
HMGN1-201ENST00000288344 SEMA3FQ13275 785 aa10.58□□□□□ -0.72
HMGN1-201ENST00000288344 PGM5Q15124 567 aa10.58□□□□□ -0.72
HMGN1-201ENST00000288344 KCNA10Q16322 511 aa10.58□□□□□ -0.72
HMGN1-201ENST00000288344 PFKFB3Q16875 520 aaPredicted RBP10.58□□□□□ -0.72
HMGN1-201ENST00000288344 WWC2Q6AWC2 1192 aa10.58□□□□□ -0.72
HMGN1-201ENST00000288344 USP17L6PQ6QN14 398 aa10.58□□□□□ -0.72
HMGN1-201ENST00000288344 EEPD1Q7L9B9 569 aa10.58□□□□□ -0.72
HMGN1-201ENST00000288344 BARHL2Q9NY43 387 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms