RNA–Protein interactions for RNA: ENST00000284049.7

CHD1-201, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD1, Length 6,457 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-201ENST00000284049 HHIPQ96QV1 700 aa3.18□□□□□ -1.9
CHD1-201ENST00000284049 IFT80Q9P2H3 777 aaPredicted RBP3.18□□□□□ -1.9
CHD1-201ENST00000284049 FER1L4A9Z1Z3 1794 aa3.18□□□□□ -1.9
CHD1-201ENST00000284049 MADDQ8WXG6 1647 aa3.18□□□□□ -1.9
CHD1-201ENST00000284049 EFCAB6Q5THR3 1501 aa3.18□□□□□ -1.9
CHD1-201ENST00000284049 OSMP13725 252 aa3.18□□□□□ -1.9
CHD1-201ENST00000284049 PMS1P54277 932 aaKnown RBP3.18□□□□□ -1.9
CHD1-201ENST00000284049 FAM193AP78312 1265 aa3.18□□□□□ -1.9
CHD1-201ENST00000284049 POU4F1Q01851 419 aa3.18□□□□□ -1.9
CHD1-201ENST00000284049 SEPT2Q15019 361 aa3.18□□□□□ -1.9
CHD1-201ENST00000284049 FAM35AQ86V20 835 aa3.18□□□□□ -1.9
CHD1-201ENST00000284049 MYCT1Q8N699 235 aa3.18□□□□□ -1.9
CHD1-201ENST00000284049 USHBP1Q8N6Y0 703 aa3.18□□□□□ -1.9
CHD1-201ENST00000284049 CEP120Q8N960 986 aa3.18□□□□□ -1.9
CHD1-201ENST00000284049 SLC35G2Q8TBE7 412 aa3.18□□□□□ -1.9
CHD1-201ENST00000284049 SNRNP27Q8WVK2 155 aaKnown RBP3.18□□□□□ -1.9
CHD1-201ENST00000284049 CCDC140Q96MF4 163 aa3.18□□□□□ -1.9
CHD1-201ENST00000284049 ZNF576Q9H609 170 aa3.18□□□□□ -1.9
CHD1-201ENST00000284049 KIAA1586Q9HCI6 787 aa3.18□□□□□ -1.9
CHD1-201ENST00000284049 CDC23Q9UJX2 597 aa3.18□□□□□ -1.9
CHD1-201ENST00000284049 HECW2Q9P2P5 1572 aa3.18□□□□□ -1.9
CHD1-201ENST00000284049 SYNDIG1LA6NDD5 238 aa3.18□□□□□ -1.9
CHD1-201ENST00000284049 AP3D1O14617 1153 aa3.18□□□□□ -1.9
CHD1-201ENST00000284049 IRAK2O43187 625 aa3.18□□□□□ -1.9
CHD1-201ENST00000284049 MAFKO60675 156 aa3.18□□□□□ -1.9
CHD1-201ENST00000284049 GSTP1P09211 210 aaKnown RBP3.18□□□□□ -1.9
CHD1-201ENST00000284049 COL6A1P12109 1028 aa3.18□□□□□ -1.9
CHD1-201ENST00000284049 ITIH2P19823 946 aa3.18□□□□□ -1.9
CHD1-201ENST00000284049 SFSWAPQ12872 951 aaKnown RBP3.18□□□□□ -1.9
CHD1-201ENST00000284049 VPS53Q5VIR6 699 aa3.18□□□□□ -1.9
CHD1-201ENST00000284049 AGAP9Q5VTM2 703 aa3.18□□□□□ -1.9
CHD1-201ENST00000284049 MAMDC2Q7Z304 686 aaPredicted RBP3.18□□□□□ -1.9
CHD1-201ENST00000284049 BVESQ8NE79 360 aa3.18□□□□□ -1.9
CHD1-201ENST00000284049 NXPE3Q969Y0 559 aa3.18□□□□□ -1.9
CHD1-201ENST00000284049 STRBPQ96SI9 672 aaKnown RBP3.18□□□□□ -1.9
CHD1-201ENST00000284049 ZCCHC2Q9C0B9 1178 aaKnown RBP3.18□□□□□ -1.9
CHD1-201ENST00000284049 OGDHLQ9ULD0 1010 aa3.18□□□□□ -1.9
CHD1-201ENST00000284049 PCDHGC4Q9Y5F7 938 aa3.18□□□□□ -1.9
CHD1-201ENST00000284049 LRRFIP2Q9Y608 721 aaKnown RBP3.18□□□□□ -1.9
CHD1-201ENST00000284049 H7C1W4 665 aa3.17□□□□□ -1.9
CHD1-201ENST00000284049 ORC4O43929 436 aa3.17□□□□□ -1.9
CHD1-201ENST00000284049 RGS20O76081 388 aa3.17□□□□□ -1.9
CHD1-201ENST00000284049 PYGLP06737 847 aa3.17□□□□□ -1.9
CHD1-201ENST00000284049 NR3C2P08235 984 aa3.17□□□□□ -1.9
CHD1-201ENST00000284049 DCAF15Q66K64 600 aa3.17□□□□□ -1.9
CHD1-201ENST00000284049 ISM2Q6H9L7 571 aa3.17□□□□□ -1.9
CHD1-201ENST00000284049 XRRA1Q6P2D8 792 aa3.17□□□□□ -1.9
CHD1-201ENST00000284049 NLRP8Q86W28 1048 aa3.17□□□□□ -1.9
CHD1-201ENST00000284049 SNX32Q86XE0 403 aa3.17□□□□□ -1.9
CHD1-201ENST00000284049 HID1Q8IV36 788 aa3.17□□□□□ -1.9
CHD1-201ENST00000284049 PPIL6Q8IXY8 311 aa3.17□□□□□ -1.9
CHD1-201ENST00000284049 EFHBQ8N7U6 833 aa3.17□□□□□ -1.9
CHD1-201ENST00000284049 NAXEQ8NCW5 288 aa3.17□□□□□ -1.9
CHD1-201ENST00000284049 CYB5D2Q8WUJ1 264 aa3.17□□□□□ -1.9
CHD1-201ENST00000284049 HDAC2Q92769 488 aaKnown RBP3.17□□□□□ -1.9
CHD1-201ENST00000284049 SEPSECSQ9HD40 501 aaKnown RBP3.17□□□□□ -1.9
CHD1-201ENST00000284049 ZNF69Q9UC07 566 aa3.17□□□□□ -1.9
CHD1-201ENST00000284049 DDX20Q9UHI6 824 aaKnown RBP3.17□□□□□ -1.9
CHD1-201ENST00000284049 PPP1R9AQ9ULJ8 1098 aa3.17□□□□□ -1.9
CHD1-201ENST00000284049 CLSPNQ9HAW4 1339 aa3.17□□□□□ -1.9
CHD1-201ENST00000284049 GPATCH8Q9UKJ3 1502 aaKnown RBP3.17□□□□□ -1.9
CHD1-201ENST00000284049 ABHD14A-ACY1A0A1B0GW23 586 aa3.17□□□□□ -1.9
CHD1-201ENST00000284049 WDR64B1ANS9 1081 aa3.17□□□□□ -1.9
CHD1-201ENST00000284049 RFPL1O75677 317 aa3.17□□□□□ -1.9
CHD1-201ENST00000284049 FGFR1P11362 822 aa3.17□□□□□ -1.9
CHD1-201ENST00000284049 ID4P47928 161 aa3.17□□□□□ -1.9
CHD1-201ENST00000284049 INTS3Q68E01 1043 aaKnown RBP3.17□□□□□ -1.9
CHD1-201ENST00000284049 FBXO38Q6PIJ6 1188 aa3.17□□□□□ -1.9
CHD1-201ENST00000284049 FOXR1Q6PIV2 292 aa3.17□□□□□ -1.9
CHD1-201ENST00000284049 CHST14Q8NCH0 376 aa3.17□□□□□ -1.9
CHD1-201ENST00000284049 PPIL4Q8WUA2 492 aaKnown RBP eCLIP3.17□□□□□ -1.9
CHD1-201ENST00000284049 FAM193BQ96PV7 902 aaPredicted RBP3.17□□□□□ -1.9
CHD1-201ENST00000284049 LGR4Q9BXB1 951 aa3.17□□□□□ -1.9
CHD1-201ENST00000284049 NOL6Q9H6R4 1146 aaKnown RBP3.17□□□□□ -1.9
CHD1-201ENST00000284049 ZWILCHQ9H900 591 aa3.17□□□□□ -1.9
CHD1-201ENST00000284049 EMC7Q9NPA0 242 aa3.17□□□□□ -1.9
CHD1-201ENST00000284049 AAASQ9NRG9 546 aa3.17□□□□□ -1.9
CHD1-201ENST00000284049 NRBP1Q9UHY1 535 aa3.17□□□□□ -1.9
CHD1-201ENST00000284049 SALL4Q9UJQ4 1053 aa3.17□□□□□ -1.9
CHD1-201ENST00000284049 TPCN1Q9ULQ1 816 aa3.17□□□□□ -1.9
CHD1-201ENST00000284049 MAGED1Q9Y5V3 778 aaPredicted RBP3.17□□□□□ -1.9
CHD1-201ENST00000284049 SNCAIPQ9Y6H5 919 aa3.17□□□□□ -1.9
CHD1-201ENST00000284049 ADGBQ8N7X0 1667 aa3.17□□□□□ -1.9
CHD1-201ENST00000284049 RGS9O75916 674 aaPredicted RBP3.17□□□□□ -1.9
CHD1-201ENST00000284049 DNAJC8O75937 253 aaPredicted RBP3.17□□□□□ -1.9
CHD1-201ENST00000284049 MYCLP12524 364 aaPredicted RBP3.17□□□□□ -1.9
CHD1-201ENST00000284049 CPB1P15086 417 aa3.17□□□□□ -1.9
CHD1-201ENST00000284049 TNFAIP3P21580 790 aa3.17□□□□□ -1.9
CHD1-201ENST00000284049 BCAR1P56945 870 aa3.17□□□□□ -1.9
CHD1-201ENST00000284049 IRF9Q00978 393 aa3.17□□□□□ -1.9
CHD1-201ENST00000284049 CCDC96Q2M329 555 aa3.17□□□□□ -1.9
CHD1-201ENST00000284049 ODF2Q5BJF6 829 aa3.17□□□□□ -1.9
CHD1-201ENST00000284049 ARMCX6Q7L4S7 300 aa3.17□□□□□ -1.9
CHD1-201ENST00000284049 DENND1CQ8IV53 801 aa3.17□□□□□ -1.9
CHD1-201ENST00000284049 TCP11L2Q8N4U5 519 aa3.17□□□□□ -1.9
CHD1-201ENST00000284049 JMYQ8N9B5 988 aa3.17□□□□□ -1.9
CHD1-201ENST00000284049 JAKMIP2Q96AA8 810 aa3.17□□□□□ -1.9
CHD1-201ENST00000284049 MRGPRX2Q96LB1 330 aa3.17□□□□□ -1.9
CHD1-201ENST00000284049 PPM1MQ96MI6 270 aa3.17□□□□□ -1.9
CHD1-201ENST00000284049 TCF12Q99081 682 aa3.17□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms