RNA–Protein interactions for RNA: ENST00000279027.8

SLC13A3-201, Transcript of solute carrier family 13 member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC13A3, Length 4,017 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC13A3-201ENST00000279027 ZNF543Q08ER8 600 aa13.15□□□□□ -0.3
SLC13A3-201ENST00000279027 ADAM9Q13443 819 aa13.15□□□□□ -0.3
SLC13A3-201ENST00000279027 PRPF4BQ13523 1007 aaKnown RBP13.15□□□□□ -0.3
SLC13A3-201ENST00000279027 MLXIPQ9HAP2 919 aa13.15□□□□□ -0.3
SLC13A3-201ENST00000279027 PDE11AQ9HCR9 933 aa13.15□□□□□ -0.3
SLC13A3-201ENST00000279027 DNM3Q9UQ16 869 aa13.15□□□□□ -0.3
SLC13A3-201ENST00000279027 SLIT2O94813 1529 aa13.15□□□□□ -0.3
SLC13A3-201ENST00000279027 FAM13AO94988 1023 aa13.15□□□□□ -0.3
SLC13A3-201ENST00000279027 GPATCH4Q5T3I0 446 aaKnown RBP13.15□□□□□ -0.3
SLC13A3-201ENST00000279027 TMC4Q7Z404 712 aa13.15□□□□□ -0.3
SLC13A3-201ENST00000279027 TMEM139Q8IV31 216 aa13.15□□□□□ -0.3
SLC13A3-201ENST00000279027 SP8Q8IXZ3 490 aa13.15□□□□□ -0.3
SLC13A3-201ENST00000279027 ANO3Q9BYT9 981 aa13.15□□□□□ -0.3
SLC13A3-201ENST00000279027 THAP9Q9H5L6 903 aa13.15□□□□□ -0.3
SLC13A3-201ENST00000279027 TOGARAM1Q9Y4F4 1720 aa13.14□□□□□ -0.31
SLC13A3-201ENST00000279027 ZNF185O15231 689 aa13.14□□□□□ -0.31
SLC13A3-201ENST00000279027 PRPF6O94906 941 aaKnown RBP13.14□□□□□ -0.31
SLC13A3-201ENST00000279027 FGRP09769 529 aa13.14□□□□□ -0.31
SLC13A3-201ENST00000279027 PLA2G4BP0C869 781 aa13.14□□□□□ -0.31
SLC13A3-201ENST00000279027 NPR1P16066 1061 aa13.14□□□□□ -0.31
SLC13A3-201ENST00000279027 GTPBP4Q9BZE4 634 aaKnown RBP13.14□□□□□ -0.31
SLC13A3-201ENST00000279027 BCS1LQ9Y276 419 aa13.14□□□□□ -0.31
SLC13A3-201ENST00000279027 F5H6K3 240 aa13.14□□□□□ -0.31
SLC13A3-201ENST00000279027 MAP3K9P80192 1104 aa13.14□□□□□ -0.31
SLC13A3-201ENST00000279027 KLRC3Q07444 240 aa13.14□□□□□ -0.31
SLC13A3-201ENST00000279027 IFT81Q8WYA0 676 aa13.14□□□□□ -0.31
SLC13A3-201ENST00000279027 TAF4BQ92750 862 aa13.14□□□□□ -0.31
SLC13A3-201ENST00000279027 ATP6V0A2Q9Y487 856 aa13.14□□□□□ -0.31
SLC13A3-201ENST00000279027 NWD2Q9ULI1 1742 aa13.14□□□□□ -0.31
SLC13A3-201ENST00000279027 CETN3O15182 167 aa13.14□□□□□ -0.31
SLC13A3-201ENST00000279027 ADRA2BP18089 450 aa13.14□□□□□ -0.31
SLC13A3-201ENST00000279027 KCNK18Q7Z418 384 aa13.14□□□□□ -0.31
SLC13A3-201ENST00000279027 COL23A1Q86Y22 540 aaPredicted RBP13.14□□□□□ -0.31
SLC13A3-201ENST00000279027 MYCT1Q8N699 235 aa13.14□□□□□ -0.31
SLC13A3-201ENST00000279027 GIMAP8Q8ND71 665 aaPredicted RBP13.14□□□□□ -0.31
SLC13A3-201ENST00000279027 RABGGTAQ92696 567 aa13.14□□□□□ -0.31
SLC13A3-201ENST00000279027 SH2D3AQ9BRG2 576 aa13.14□□□□□ -0.31
SLC13A3-201ENST00000279027 NUP58Q9BVL2 599 aa13.14□□□□□ -0.31
SLC13A3-201ENST00000279027 HAUS4Q9H6D7 363 aa13.14□□□□□ -0.31
SLC13A3-201ENST00000279027 ABCB6Q9NP58 842 aa13.14□□□□□ -0.31
SLC13A3-201ENST00000279027 LUC7LQ9NQ29 371 aaKnown RBP13.14□□□□□ -0.31
SLC13A3-201ENST00000279027 MYH14Q7Z406 1995 aaKnown RBP13.13□□□□□ -0.31
SLC13A3-201ENST00000279027 DDTLA6NHG4 134 aaPredicted RBP13.13□□□□□ -0.31
SLC13A3-201ENST00000279027 ECE2O60344 883 aa13.13□□□□□ -0.31
SLC13A3-201ENST00000279027 RHOBTB3O94955 611 aa13.13□□□□□ -0.31
SLC13A3-201ENST00000279027 ATP1A1P05023 1023 aaKnown RBP13.13□□□□□ -0.31
SLC13A3-201ENST00000279027 CTTNQ14247 550 aaKnown RBP13.13□□□□□ -0.31
SLC13A3-201ENST00000279027 GBP3Q9H0R5 595 aa13.13□□□□□ -0.31
SLC13A3-201ENST00000279027 SMARCAL1Q9NZC9 954 aa13.13□□□□□ -0.31
SLC13A3-201ENST00000279027 PI4KBQ9UBF8 816 aa13.13□□□□□ -0.31
SLC13A3-201ENST00000279027 SPEF2Q9C093 1822 aa13.13□□□□□ -0.31
SLC13A3-201ENST00000279027 ROBO1Q9Y6N7 1651 aa13.13□□□□□ -0.31
SLC13A3-201ENST00000279027 ZSCAN20P17040 1043 aaPredicted RBP13.13□□□□□ -0.31
SLC13A3-201ENST00000279027 APBA1Q02410 837 aa13.13□□□□□ -0.31
SLC13A3-201ENST00000279027 C2orf54Q08AI8 447 aa13.13□□□□□ -0.31
SLC13A3-201ENST00000279027 GRB10Q13322 594 aa13.13□□□□□ -0.31
SLC13A3-201ENST00000279027 C4orf32Q8N8J7 132 aa13.13□□□□□ -0.31
SLC13A3-201ENST00000279027 EHBP1Q8NDI1 1231 aa13.13□□□□□ -0.31
SLC13A3-201ENST00000279027 AMNQ9BXJ7 453 aa13.13□□□□□ -0.31
SLC13A3-201ENST00000279027 ZBTB12Q9Y330 459 aaPredicted RBP13.13□□□□□ -0.31
SLC13A3-201ENST00000279027 HLTFQ14527 1009 aaKnown RBP eCLIP13.13□□□□□ -0.316e-7■■■□□ 17.3
SLC13A3-201ENST00000279027 RAD54LQ92698 747 aa13.13□□□□□ -0.31
SLC13A3-201ENST00000279027 BHMT2Q9H2M3 363 aa13.13□□□□□ -0.31
SLC13A3-201ENST00000279027 KIF20AO95235 890 aa13.12□□□□□ -0.31
SLC13A3-201ENST00000279027 DMTNQ08495 405 aa13.12□□□□□ -0.31
SLC13A3-201ENST00000279027 VWA3BQ502W6 1294 aa13.12□□□□□ -0.31
SLC13A3-201ENST00000279027 CC2D1AQ6P1N0 951 aaPredicted RBP13.12□□□□□ -0.31
SLC13A3-201ENST00000279027 UNC13DQ70J99 1090 aa13.12□□□□□ -0.31
SLC13A3-201ENST00000279027 ELOA2Q8IYF1 753 aaPredicted RBP13.12□□□□□ -0.31
SLC13A3-201ENST00000279027 NOA1Q8NC60 698 aaKnown RBP13.12□□□□□ -0.31
SLC13A3-201ENST00000279027 SPATA20Q8TB22 786 aa13.12□□□□□ -0.31
SLC13A3-201ENST00000279027 KBTBD4Q9NVX7 518 aa13.12□□□□□ -0.31
SLC13A3-201ENST00000279027 SWAP70Q9UH65 585 aa13.12□□□□□ -0.31
SLC13A3-201ENST00000279027 ITGB4P16144 1822 aa13.12□□□□□ -0.31
SLC13A3-201ENST00000279027 NUP188Q5SRE5 1749 aa13.12□□□□□ -0.31
SLC13A3-201ENST00000279027 CCDC66A2RUB6 948 aa13.12□□□□□ -0.31
SLC13A3-201ENST00000279027 LRRC53A6NM62 1247 aa13.12□□□□□ -0.31
SLC13A3-201ENST00000279027 POLRMTO00411 1230 aaKnown RBP13.12□□□□□ -0.31
SLC13A3-201ENST00000279027 NCK2O43639 380 aa13.12□□□□□ -0.31
SLC13A3-201ENST00000279027 NR2F2P24468 414 aa13.12□□□□□ -0.31
SLC13A3-201ENST00000279027 KCNJ6P48051 423 aa13.12□□□□□ -0.31
SLC13A3-201ENST00000279027 CYP2J2P51589 502 aa13.12□□□□□ -0.31
SLC13A3-201ENST00000279027 ZBED6P86452 979 aa13.12□□□□□ -0.31
SLC13A3-201ENST00000279027 KLHL30Q0D2K2 578 aa13.12□□□□□ -0.31
SLC13A3-201ENST00000279027 COASYQ13057 564 aa13.12□□□□□ -0.31
SLC13A3-201ENST00000279027 LEKR1Q6ZMV7 388 aa13.12□□□□□ -0.31
SLC13A3-201ENST00000279027 DNAAF5Q86Y56 855 aa13.12□□□□□ -0.31
SLC13A3-201ENST00000279027 MASTLQ96GX5 879 aa13.12□□□□□ -0.31
SLC13A3-201ENST00000279027 CUEDC2Q9H467 287 aa13.12□□□□□ -0.31
SLC13A3-201ENST00000279027 RGL1Q9NZL6 768 aa13.12□□□□□ -0.31
SLC13A3-201ENST00000279027 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.12□□□□□ -0.31
SLC13A3-201ENST00000279027 SLC7A5Q01650 507 aa13.12□□□□□ -0.31
SLC13A3-201ENST00000279027 GFPT1Q06210 699 aaPredicted RBP13.12□□□□□ -0.31
SLC13A3-201ENST00000279027 DLGAP5Q15398 846 aa13.12□□□□□ -0.31
SLC13A3-201ENST00000279027 CT47A1Q5JQC4 288 aaPredicted RBP13.12□□□□□ -0.31
SLC13A3-201ENST00000279027 TTI2Q6NXR4 508 aa13.12□□□□□ -0.31
SLC13A3-201ENST00000279027 CRAMP1Q96RY5 1269 aa13.12□□□□□ -0.31
SLC13A3-201ENST00000279027 ZNF446Q9NWS9 450 aa13.12□□□□□ -0.31
SLC13A3-201ENST00000279027 POTEB2H3BUK9 544 aa13.11□□□□□ -0.31
SLC13A3-201ENST00000279027 IL1R1P14778 569 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms