RNA–Protein interactions for RNA: ENST00000276585.8

MRPS28-201, Transcript of mitochondrial ribosomal protein S28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MRPS28, Length 850 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28-201ENST00000276585 HIP1O00291 1037 aa14.46□□□□□ -0.09
MRPS28-201ENST00000276585 MCCP23508 829 aa14.46□□□□□ -0.09
MRPS28-201ENST00000276585 MFAP1P55081 439 aaKnown RBP14.46□□□□□ -0.09
MRPS28-201ENST00000276585 DEFB103AP81534 67 aa14.46□□□□□ -0.09
MRPS28-201ENST00000276585 CLUL1Q15846 466 aa14.46□□□□□ -0.09
MRPS28-201ENST00000276585 TCEAL5Q5H9L2 206 aa14.46□□□□□ -0.09
MRPS28-201ENST00000276585 RRP12Q5JTH9 1297 aaKnown RBP14.46□□□□□ -0.09
MRPS28-201ENST00000276585 FAM117BQ6P1L5 589 aa14.46□□□□□ -0.09
MRPS28-201ENST00000276585 BANK1Q8NDB2 785 aa14.46□□□□□ -0.09
MRPS28-201ENST00000276585 KIFC2Q96AC6 838 aa14.46□□□□□ -0.09
MRPS28-201ENST00000276585 CHMP4CQ96CF2 233 aa14.46□□□□□ -0.09
MRPS28-201ENST00000276585 FGD4Q96M96 766 aa14.46□□□□□ -0.09
MRPS28-201ENST00000276585 C17orf80Q9BSJ5 609 aa14.46□□□□□ -0.09
MRPS28-201ENST00000276585 DSCC1Q9BVC3 393 aa14.46□□□□□ -0.09
MRPS28-201ENST00000276585 TLR9Q9NR96 1032 aa14.46□□□□□ -0.09
MRPS28-201ENST00000276585 TCP11L1Q9NUJ3 509 aa14.46□□□□□ -0.09
MRPS28-201ENST00000276585 PRR23AA6NEV1 266 aa14.45□□□□□ -0.1
MRPS28-201ENST00000276585 TMEM232C9JQI7 657 aa14.45□□□□□ -0.1
MRPS28-201ENST00000276585 PITPNM1O00562 1244 aa14.45□□□□□ -0.1
MRPS28-201ENST00000276585 PLA2G6O60733 806 aa14.45□□□□□ -0.1
MRPS28-201ENST00000276585 GJB5O95377 273 aa14.45□□□□□ -0.1
MRPS28-201ENST00000276585 SMPD1P17405 629 aa14.45□□□□□ -0.1
MRPS28-201ENST00000276585 VCPP55072 806 aaKnown RBP14.45□□□□□ -0.1
MRPS28-201ENST00000276585 BFSP2Q13515 415 aa14.45□□□□□ -0.1
MRPS28-201ENST00000276585 KCTD1Q719H9 257 aa14.45□□□□□ -0.1
MRPS28-201ENST00000276585 CPXCR1Q8N123 301 aa14.45□□□□□ -0.1
MRPS28-201ENST00000276585 TMEM47Q9BQJ4 181 aa14.45□□□□□ -0.1
MRPS28-201ENST00000276585 RAVER2Q9HCJ3 691 aaKnown RBP14.45□□□□□ -0.1
MRPS28-201ENST00000276585 RAD50Q92878 1312 aa14.44□□□□□ -0.1
MRPS28-201ENST00000276585 SIP14410 1827 aa14.44□□□□□ -0.1
MRPS28-201ENST00000276585 PROB1E7EW31 1015 aa14.44□□□□□ -0.1
MRPS28-201ENST00000276585 STXBP3O00186 592 aa14.44□□□□□ -0.1
MRPS28-201ENST00000276585 KDM4AO75164 1064 aa14.44□□□□□ -0.1
MRPS28-201ENST00000276585 PCP11498 1178 aaKnown RBP14.44□□□□□ -0.1
MRPS28-201ENST00000276585 STAT2P52630 851 aa14.44□□□□□ -0.1
MRPS28-201ENST00000276585 SMAD2Q15796 467 aaKnown RBP14.44□□□□□ -0.1
MRPS28-201ENST00000276585 PPP4R3BQ5MIZ7 849 aa14.44□□□□□ -0.1
MRPS28-201ENST00000276585 MFSD6Q6ZSS7 791 aa14.44□□□□□ -0.1
MRPS28-201ENST00000276585 RPAINQ86UA6 219 aa14.44□□□□□ -0.1
MRPS28-201ENST00000276585 TOMM22Q9NS69 142 aa14.44□□□□□ -0.1
MRPS28-201ENST00000276585 NOD1Q9Y239 953 aa14.44□□□□□ -0.1
MRPS28-201ENST00000276585 TET1Q8NFU7 2136 aa14.44□□□□□ -0.1
MRPS28-201ENST00000276585 PTPRSQ13332 1948 aa14.43□□□□□ -0.1
MRPS28-201ENST00000276585 COL4A6Q14031 1691 aa14.43□□□□□ -0.1
MRPS28-201ENST00000276585 ZBED4O75132 1171 aa14.43□□□□□ -0.1
MRPS28-201ENST00000276585 MYL3P08590 195 aa14.43□□□□□ -0.1
MRPS28-201ENST00000276585 TOP1P11387 765 aaKnown RBP14.43□□□□□ -0.1
MRPS28-201ENST00000276585 CHMLP26374 656 aa14.43□□□□□ -0.1
MRPS28-201ENST00000276585 SLC1A4P43007 532 aa14.43□□□□□ -0.1
MRPS28-201ENST00000276585 OAZ1P54368 228 aa14.43□□□□□ -0.1
MRPS28-201ENST00000276585 TTBK2Q6IQ55 1244 aa14.43□□□□□ -0.1
MRPS28-201ENST00000276585 FAM160B2Q86V87 743 aa14.43□□□□□ -0.1
MRPS28-201ENST00000276585 SKAP1Q86WV1 359 aa14.43□□□□□ -0.1
MRPS28-201ENST00000276585 DCAF4Q8WV16 495 aa14.43□□□□□ -0.1
MRPS28-201ENST00000276585 ALG13Q9NP73 1137 aaKnown RBP14.43□□□□□ -0.1
MRPS28-201ENST00000276585 POLR3EQ9NVU0 708 aa14.43□□□□□ -0.1
MRPS28-201ENST00000276585 FBXO40Q9UH90 709 aa14.43□□□□□ -0.1
MRPS28-201ENST00000276585 PRR12Q9ULL5 1215 aa14.43□□□□□ -0.1
MRPS28-201ENST00000276585 KMT2EQ8IZD2 1858 aa14.43□□□□□ -0.1
MRPS28-201ENST00000276585 PLXNA3P51805 1871 aa14.42□□□□□ -0.1
MRPS28-201ENST00000276585 TANC1Q9C0D5 1861 aa14.42□□□□□ -0.1
MRPS28-201ENST00000276585 MED19A0JLT2 244 aaPredicted RBP14.42□□□□□ -0.1
MRPS28-201ENST00000276585 ZNF213O14771 459 aa14.42□□□□□ -0.1
MRPS28-201ENST00000276585 MBTPS2O43462 519 aa14.42□□□□□ -0.1
MRPS28-201ENST00000276585 SNHG28P0DPA3 235 aa14.42□□□□□ -0.1
MRPS28-201ENST00000276585 AVPR2P30518 371 aa14.42□□□□□ -0.1
MRPS28-201ENST00000276585 SNAP25P60880 206 aa14.42□□□□□ -0.1
MRPS28-201ENST00000276585 ZXDAP98168 799 aa14.42□□□□□ -0.1
MRPS28-201ENST00000276585 CNTN2Q02246 1040 aa14.42□□□□□ -0.1
MRPS28-201ENST00000276585 PTH1RQ03431 593 aa14.42□□□□□ -0.1
MRPS28-201ENST00000276585 BTNL9Q6UXG8 535 aa14.42□□□□□ -0.1
MRPS28-201ENST00000276585 PPP1R13LQ8WUF5 828 aa14.42□□□□□ -0.1
MRPS28-201ENST00000276585 RNF41Q9H4P4 317 aaPredicted RBP14.42□□□□□ -0.1
MRPS28-201ENST00000276585 NSUN3Q9H649 340 aaKnown RBP14.42□□□□□ -0.1
MRPS28-201ENST00000276585 GPHNQ9NQX3 736 aaPredicted RBP14.42□□□□□ -0.1
MRPS28-201ENST00000276585 PDGFCQ9NRA1 345 aa14.42□□□□□ -0.1
MRPS28-201ENST00000276585 MTMR7Q9Y216 660 aa14.42□□□□□ -0.1
MRPS28-201ENST00000276585 TAF6LQ9Y6J9 622 aa14.42□□□□□ -0.1
MRPS28-201ENST00000276585 DMDP11532 3685 aa14.42□□□□□ -0.1
MRPS28-201ENST00000276585 ASB14A6NK59 587 aa14.41□□□□□ -0.1
MRPS28-201ENST00000276585 B4E1Z4 1266 aa14.41□□□□□ -0.1
MRPS28-201ENST00000276585 ABCB7O75027 752 aa14.41□□□□□ -0.1
MRPS28-201ENST00000276585 RGS20O76081 388 aa14.41□□□□□ -0.1
MRPS28-201ENST00000276585 FDX1P10109 184 aa14.41□□□□□ -0.1
MRPS28-201ENST00000276585 PDHBP11177 359 aa14.41□□□□□ -0.1
MRPS28-201ENST00000276585 IQSEC1Q6DN90 963 aa14.41□□□□□ -0.1
MRPS28-201ENST00000276585 CNKSR3Q6P9H4 555 aa14.41□□□□□ -0.1
MRPS28-201ENST00000276585 EEPD1Q7L9B9 569 aa14.41□□□□□ -0.1
MRPS28-201ENST00000276585 CHURC1Q8WUH1 139 aa14.41□□□□□ -0.1
MRPS28-201ENST00000276585 ZKSCAN3Q9BRR0 538 aa14.41□□□□□ -0.1
MRPS28-201ENST00000276585 Q9Y3F1 56 aa14.41□□□□□ -0.1
MRPS28-201ENST00000276585 SGSM2O43147 1006 aa14.4□□□□□ -0.1
MRPS28-201ENST00000276585 SLC16A2P36021 539 aa14.4□□□□□ -0.1
MRPS28-201ENST00000276585 PURAQ00577 322 aaKnown RBP14.4□□□□□ -0.1
MRPS28-201ENST00000276585 ZNF543Q08ER8 600 aa14.4□□□□□ -0.1
MRPS28-201ENST00000276585 GPM6BQ13491 265 aa14.4□□□□□ -0.1
MRPS28-201ENST00000276585 CCDC96Q2M329 555 aa14.4□□□□□ -0.1
MRPS28-201ENST00000276585 NBPF20Q3BBV1 942 aa14.4□□□□□ -0.1
MRPS28-201ENST00000276585 EPC2Q52LR7 807 aa14.4□□□□□ -0.1
MRPS28-201ENST00000276585 TMEM63BQ5T3F8 832 aa14.4□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms