RNA–Protein interactions for RNA: ENST00000276573.11

TRIM55-201, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 1,960 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-201ENST00000276573 FCHSD1Q86WN1 690 aa10.74□□□□□ -0.69
TRIM55-201ENST00000276573 IRF2BP1Q8IU81 584 aa10.74□□□□□ -0.69
TRIM55-201ENST00000276573 CCDC112Q8NEF3 446 aa10.74□□□□□ -0.69
TRIM55-201ENST00000276573 LENG9Q96B70 501 aa10.74□□□□□ -0.69
TRIM55-201ENST00000276573 FAM20AQ96MK3 541 aa10.74□□□□□ -0.69
TRIM55-201ENST00000276573 UIMC1Q96RL1 719 aa10.74□□□□□ -0.69
TRIM55-201ENST00000276573 NT5C3AQ9H0P0 336 aa10.74□□□□□ -0.69
TRIM55-201ENST00000276573 DEFB129Q9H1M3 183 aa10.74□□□□□ -0.69
TRIM55-201ENST00000276573 TRIM49BA6NDI0 452 aa10.73□□□□□ -0.69
TRIM55-201ENST00000276573 KCNJ18B7U540 433 aa10.73□□□□□ -0.69
TRIM55-201ENST00000276573 GCOM1H8Y6P7 765 aaPredicted RBP10.73□□□□□ -0.69
TRIM55-201ENST00000276573 CFBP00751 764 aa10.73□□□□□ -0.69
TRIM55-201ENST00000276573 POLR2MP0CAP2 368 aa10.73□□□□□ -0.69
TRIM55-201ENST00000276573 FCER1AP12319 257 aa10.73□□□□□ -0.69
TRIM55-201ENST00000276573 PMS1P54277 932 aaKnown RBP10.73□□□□□ -0.69
TRIM55-201ENST00000276573 KCNJ12Q14500 433 aa10.73□□□□□ -0.69
TRIM55-201ENST00000276573 KIF4BQ2VIQ3 1234 aa10.73□□□□□ -0.69
TRIM55-201ENST00000276573 NBPF12Q5TAG4 269 aaPredicted RBP10.73□□□□□ -0.69
TRIM55-201ENST00000276573 TTI2Q6NXR4 508 aa10.73□□□□□ -0.69
TRIM55-201ENST00000276573 LDHDQ86WU2 507 aa10.73□□□□□ -0.69
TRIM55-201ENST00000276573 CCAR2Q8N163 923 aaKnown RBP10.73□□□□□ -0.69
TRIM55-201ENST00000276573 FEZ1Q99689 392 aa10.73□□□□□ -0.69
TRIM55-201ENST00000276573 DUSP9Q99956 384 aaKnown RBP10.73□□□□□ -0.69
TRIM55-201ENST00000276573 KIAA1683Q9H0B3 1180 aa10.73□□□□□ -0.69
TRIM55-201ENST00000276573 ABCB11O95342 1321 aa10.73□□□□□ -0.69
TRIM55-201ENST00000276573 KDM3AQ9Y4C1 1321 aa10.73□□□□□ -0.69
TRIM55-201ENST00000276573 USP27XA6NNY8 438 aa10.72□□□□□ -0.69
TRIM55-201ENST00000276573 WDR46O15213 610 aaKnown RBP10.72□□□□□ -0.69
TRIM55-201ENST00000276573 HOXA7P31268 230 aaPredicted RBP10.72□□□□□ -0.69
TRIM55-201ENST00000276573 ZNF76P36508 570 aa10.72□□□□□ -0.69
TRIM55-201ENST00000276573 STAT3P40763 770 aa10.72□□□□□ -0.69
TRIM55-201ENST00000276573 COPB1P53618 953 aaKnown RBP10.72□□□□□ -0.69
TRIM55-201ENST00000276573 SPIRE1Q08AE8 756 aa10.72□□□□□ -0.69
TRIM55-201ENST00000276573 GOLGA8FQ08AF8 430 aa10.72□□□□□ -0.69
TRIM55-201ENST00000276573 GOLGA8DPQ0D2H9 430 aa10.72□□□□□ -0.69
TRIM55-201ENST00000276573 PSMD2Q13200 908 aa10.72□□□□□ -0.69
TRIM55-201ENST00000276573 E4F1Q66K89 784 aaPredicted RBP10.72□□□□□ -0.69
TRIM55-201ENST00000276573 DYMQ7RTS9 669 aa10.72□□□□□ -0.69
TRIM55-201ENST00000276573 TC2NQ8N9U0 490 aa10.72□□□□□ -0.69
TRIM55-201ENST00000276573 PRPF38AQ8NAV1 312 aaKnown RBP10.72□□□□□ -0.69
TRIM55-201ENST00000276573 ANKRD20A12PQ8NF67 263 aa10.72□□□□□ -0.69
TRIM55-201ENST00000276573 NOC3LQ8WTT2 800 aaKnown RBP10.72□□□□□ -0.69
TRIM55-201ENST00000276573 LPAR1Q92633 364 aa10.72□□□□□ -0.69
TRIM55-201ENST00000276573 DDX12PQ92771 950 aa10.72□□□□□ -0.69
TRIM55-201ENST00000276573 P2RX5Q93086 422 aa10.72□□□□□ -0.69
TRIM55-201ENST00000276573 PRIMPOLQ96LW4 560 aa10.72□□□□□ -0.69
TRIM55-201ENST00000276573 SRRTQ9BXP5 876 aaKnown RBP10.72□□□□□ -0.69
TRIM55-201ENST00000276573 THAP9Q9H5L6 903 aa10.72□□□□□ -0.69
TRIM55-201ENST00000276573 KIAA1024Q9UPX6 916 aa10.72□□□□□ -0.69
TRIM55-201ENST00000276573 E9PMD0 336 aa10.72□□□□□ -0.69
TRIM55-201ENST00000276573 N4BP3O15049 544 aa10.72□□□□□ -0.69
TRIM55-201ENST00000276573 MSH4O15457 936 aa10.72□□□□□ -0.69
TRIM55-201ENST00000276573 MED24O75448 989 aa10.72□□□□□ -0.69
TRIM55-201ENST00000276573 ANKRD40Q6AI12 368 aa10.72□□□□□ -0.69
TRIM55-201ENST00000276573 SAMD1Q6SPF0 538 aaPredicted RBP10.72□□□□□ -0.69
TRIM55-201ENST00000276573 KIAA0895Q8NCT3 520 aa10.72□□□□□ -0.69
TRIM55-201ENST00000276573 CYP2W1Q8TAV3 490 aa10.72□□□□□ -0.69
TRIM55-201ENST00000276573 UPF1Q92900 1129 aaKnown RBP eCLIP10.72□□□□□ -0.69
TRIM55-201ENST00000276573 HPS3Q969F9 1004 aa10.72□□□□□ -0.69
TRIM55-201ENST00000276573 DNAJC19Q96DA6 116 aa10.72□□□□□ -0.69
TRIM55-201ENST00000276573 VPS16Q9H269 839 aa10.72□□□□□ -0.69
TRIM55-201ENST00000276573 SLC39A2Q9NP94 309 aa10.72□□□□□ -0.69
TRIM55-201ENST00000276573 TRMT1Q9NXH9 659 aaKnown RBP10.72□□□□□ -0.69
TRIM55-201ENST00000276573 ZNF112Q9UJU3 913 aa10.72□□□□□ -0.69
TRIM55-201ENST00000276573 STK24Q9Y6E0 443 aa10.72□□□□□ -0.69
TRIM55-201ENST00000276573 ZNF541Q9H0D2 1346 aa10.72□□□□□ -0.69
TRIM55-201ENST00000276573 SMCHD1A6NHR9 2005 aa10.71□□□□□ -0.69
TRIM55-201ENST00000276573 IGLV3-22A0A075B6J6 115 aa10.71□□□□□ -0.69
TRIM55-201ENST00000276573 BICDL2A1A5D9 508 aa10.71□□□□□ -0.69
TRIM55-201ENST00000276573 ICAM1P05362 532 aa10.71□□□□□ -0.69
TRIM55-201ENST00000276573 TPM2P07951 284 aa10.71□□□□□ -0.69
TRIM55-201ENST00000276573 TNNT1P13805 278 aa10.71□□□□□ -0.69
TRIM55-201ENST00000276573 ADKP55263 362 aaKnown RBP10.71□□□□□ -0.69
TRIM55-201ENST00000276573 EHHADHQ08426 723 aa10.71□□□□□ -0.69
TRIM55-201ENST00000276573 DCAF15Q66K64 600 aa10.71□□□□□ -0.69
TRIM55-201ENST00000276573 CENPPQ6IPU0 288 aa10.71□□□□□ -0.69
TRIM55-201ENST00000276573 TMEM139Q8IV31 216 aa10.71□□□□□ -0.69
TRIM55-201ENST00000276573 ERMNQ8TAM6 284 aa10.71□□□□□ -0.69
TRIM55-201ENST00000276573 TRIM47Q96LD4 638 aa10.71□□□□□ -0.69
TRIM55-201ENST00000276573 C16orf45Q96MC5 204 aaPredicted RBP10.71□□□□□ -0.69
TRIM55-201ENST00000276573 AGBL1Q96MI9 1066 aa10.71□□□□□ -0.69
TRIM55-201ENST00000276573 BMP2KQ9NSY1 1161 aaPredicted RBP10.71□□□□□ -0.69
TRIM55-201ENST00000276573 TAB2Q9NYJ8 693 aa10.71□□□□□ -0.69
TRIM55-201ENST00000276573 ZNF536O15090 1300 aa10.71□□□□□ -0.7
TRIM55-201ENST00000276573 POTEB3A0JP26 581 aa10.7□□□□□ -0.7
TRIM55-201ENST00000276573 POTECB2RU33 542 aa10.7□□□□□ -0.7
TRIM55-201ENST00000276573 AKR1B15C9JRZ8 316 aaPredicted RBP10.7□□□□□ -0.7
TRIM55-201ENST00000276573 PLA2G4BP0C869 781 aa10.7□□□□□ -0.7
TRIM55-201ENST00000276573 IDEP14735 1019 aa10.7□□□□□ -0.7
TRIM55-201ENST00000276573 EEF1GP26641 437 aaKnown RBP10.7□□□□□ -0.7
TRIM55-201ENST00000276573 RPA1P27694 616 aa10.7□□□□□ -0.7
TRIM55-201ENST00000276573 NCAPH2Q6IBW4 605 aa10.7□□□□□ -0.7
TRIM55-201ENST00000276573 POTEBQ6S5H4 581 aa10.7□□□□□ -0.7
TRIM55-201ENST00000276573 NYAP1Q6ZVC0 841 aa10.7□□□□□ -0.7
TRIM55-201ENST00000276573 PPFIBP1Q86W92 1011 aa10.7□□□□□ -0.7
TRIM55-201ENST00000276573 CATSPER3Q86XQ3 398 aa10.7□□□□□ -0.7
TRIM55-201ENST00000276573 CREBRFQ8IUR6 639 aa10.7□□□□□ -0.7
TRIM55-201ENST00000276573 HOOK2Q96ED9 719 aa10.7□□□□□ -0.7
TRIM55-201ENST00000276573 SLF1Q9BQI6 1058 aa10.7□□□□□ -0.7
TRIM55-201ENST00000276573 SEMA6BQ9H3T3 888 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms