RNA–Protein interactions for RNA: ENST00000275954.3

TMEM47-201, Transcript of transmembrane protein 47, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM47, Length 4,054 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM47-201ENST00000275954 PARD6BQ9BYG5 372 aa15.81■□□□□ 0.12
TMEM47-201ENST00000275954 LAD1O00515 517 aa15.81■□□□□ 0.12
TMEM47-201ENST00000275954 PLSCR1O15162 318 aa15.81■□□□□ 0.12
TMEM47-201ENST00000275954 FCER1AP12319 257 aa15.81■□□□□ 0.12
TMEM47-201ENST00000275954 LLGL1Q15334 1064 aa15.81■□□□□ 0.12
TMEM47-201ENST00000275954 NTRK3Q16288 839 aa15.81■□□□□ 0.12
TMEM47-201ENST00000275954 PODXL2Q9NZ53 605 aa15.81■□□□□ 0.12
TMEM47-201ENST00000275954 MYO9BQ13459 2157 aa15.8■□□□□ 0.12
TMEM47-201ENST00000275954 FAM178BQ8IXR5 827 aa15.8■□□□□ 0.12
TMEM47-201ENST00000275954 TMEM60Q9H2L4 133 aa15.8■□□□□ 0.12
TMEM47-201ENST00000275954 TUBE1Q9UJT0 475 aa15.8■□□□□ 0.12
TMEM47-201ENST00000275954 TNNC1P63316 161 aa15.8■□□□□ 0.12
TMEM47-201ENST00000275954 FKBP3Q00688 224 aaKnown RBP15.8■□□□□ 0.12
TMEM47-201ENST00000275954 GRIK5Q16478 980 aa15.8■□□□□ 0.12
TMEM47-201ENST00000275954 ANGEL2Q5VTE6 544 aaKnown RBP15.8■□□□□ 0.12
TMEM47-201ENST00000275954 CHURC1Q8WUH1 139 aa15.8■□□□□ 0.12
TMEM47-201ENST00000275954 MTA3Q9BTC8 594 aa15.8■□□□□ 0.12
TMEM47-201ENST00000275954 BARHL2Q9NY43 387 aa15.8■□□□□ 0.12
TMEM47-201ENST00000275954 GUCY2FP51841 1108 aa15.8■□□□□ 0.12
TMEM47-201ENST00000275954 EHHADHQ08426 723 aa15.8■□□□□ 0.12
TMEM47-201ENST00000275954 SPP2Q13103 211 aa15.8■□□□□ 0.12
TMEM47-201ENST00000275954 RASA3Q14644 834 aa15.8■□□□□ 0.12
TMEM47-201ENST00000275954 DDX12PQ92771 950 aa15.8■□□□□ 0.12
TMEM47-201ENST00000275954 CCDC127Q96BQ5 260 aa15.8■□□□□ 0.12
TMEM47-201ENST00000275954 ZHX2Q9Y6X8 837 aa15.8■□□□□ 0.12
TMEM47-201ENST00000275954 KDM3AQ9Y4C1 1321 aa15.79■□□□□ 0.12
TMEM47-201ENST00000275954 TUBBP07437 444 aa15.79■□□□□ 0.12
TMEM47-201ENST00000275954 TUBB4BP68371 445 aa15.79■□□□□ 0.12
TMEM47-201ENST00000275954 GRM4Q14833 912 aa15.79■□□□□ 0.12
TMEM47-201ENST00000275954 CDC37Q16543 378 aaPredicted RBP15.79■□□□□ 0.12
TMEM47-201ENST00000275954 PDE11AQ9HCR9 933 aa15.79■□□□□ 0.12
TMEM47-201ENST00000275954 PI4KBQ9UBF8 816 aa15.79■□□□□ 0.12
TMEM47-201ENST00000275954 ROBO1Q9Y6N7 1651 aa15.79■□□□□ 0.12
TMEM47-201ENST00000275954 TTC26A0AVF1 554 aa15.79■□□□□ 0.12
TMEM47-201ENST00000275954 SRGAP2O75044 1071 aa15.79■□□□□ 0.12
TMEM47-201ENST00000275954 RPS6KA1Q15418 735 aa15.79■□□□□ 0.12
TMEM47-201ENST00000275954 C9orf131Q5VYM1 1079 aa15.79■□□□□ 0.12
TMEM47-201ENST00000275954 MB21D1Q8N884 522 aa15.79■□□□□ 0.12
TMEM47-201ENST00000275954 UBLCP1Q8WVY7 318 aaPredicted RBP15.79■□□□□ 0.12
TMEM47-201ENST00000275954 RIOK1Q9BRS2 568 aaKnown RBP15.79■□□□□ 0.12
TMEM47-201ENST00000275954 E9PMD0 336 aa15.79■□□□□ 0.12
TMEM47-201ENST00000275954 KCNK3O14649 394 aa15.79■□□□□ 0.12
TMEM47-201ENST00000275954 WHAMMP3Q1A5X7 153 aa15.79■□□□□ 0.12
TMEM47-201ENST00000275954 NBPF9Q3BBW0 867 aa15.79■□□□□ 0.12
TMEM47-201ENST00000275954 NAA35Q5VZE5 725 aa15.79■□□□□ 0.12
TMEM47-201ENST00000275954 LRP10Q7Z4F1 713 aa15.79■□□□□ 0.12
TMEM47-201ENST00000275954 TRIM58Q8NG06 486 aa15.79■□□□□ 0.12
TMEM47-201ENST00000275954 RABGGTAQ92696 567 aa15.79■□□□□ 0.12
TMEM47-201ENST00000275954 AKT1S1Q96B36 256 aa15.79■□□□□ 0.12
TMEM47-201ENST00000275954 OTUD5Q96G74 571 aa15.79■□□□□ 0.12
TMEM47-201ENST00000275954 ZNF341Q9BYN7 854 aa15.79■□□□□ 0.12
TMEM47-201ENST00000275954 NDST4Q9H3R1 872 aa15.79■□□□□ 0.12
TMEM47-201ENST00000275954 PHLPP2Q6ZVD8 1323 aa15.79■□□□□ 0.12
TMEM47-201ENST00000275954 GCOM1H8Y6P7 765 aaPredicted RBP15.79■□□□□ 0.12
TMEM47-201ENST00000275954 SPOPO43791 374 aa15.79■□□□□ 0.12
TMEM47-201ENST00000275954 OPA1O60313 960 aa15.79■□□□□ 0.12
TMEM47-201ENST00000275954 POLR2MP0CAP2 368 aa15.79■□□□□ 0.12
TMEM47-201ENST00000275954 BMP3P12645 472 aa15.79■□□□□ 0.12
TMEM47-201ENST00000275954 EIF4A3P38919 411 aaKnown RBP15.79■□□□□ 0.12
TMEM47-201ENST00000275954 LONRF2Q1L5Z9 754 aa15.79■□□□□ 0.12
TMEM47-201ENST00000275954 VWA3BQ502W6 1294 aa15.79■□□□□ 0.12
TMEM47-201ENST00000275954 PEX26Q7Z412 305 aa15.79■□□□□ 0.12
TMEM47-201ENST00000275954 PRMT6Q96LA8 375 aaPredicted RBP15.79■□□□□ 0.12
TMEM47-201ENST00000275954 CUEDC2Q9H467 287 aa15.79■□□□□ 0.12
TMEM47-201ENST00000275954 GGA3Q9NZ52 723 aa15.79■□□□□ 0.12
TMEM47-201ENST00000275954 CTTNBP2NLQ9P2B4 639 aa15.79■□□□□ 0.12
TMEM47-201ENST00000275954 MYO1AQ9UBC5 1043 aa15.79■□□□□ 0.12
TMEM47-201ENST00000275954 DDX41Q9UJV9 622 aaKnown RBP15.79■□□□□ 0.12
TMEM47-201ENST00000275954 ZNRF3Q9ULT6 936 aa15.79■□□□□ 0.12
TMEM47-201ENST00000275954 DAGLAQ9Y4D2 1042 aa15.79■□□□□ 0.12
TMEM47-201ENST00000275954 PIK3C2AO00443 1686 aa15.78■□□□□ 0.12
TMEM47-201ENST00000275954 PNMA6FA0A0J9YX94 578 aa15.78■□□□□ 0.12
TMEM47-201ENST00000275954 RCAN1P53805 252 aa15.78■□□□□ 0.12
TMEM47-201ENST00000275954 PLCB3Q01970 1234 aa15.78■□□□□ 0.12
TMEM47-201ENST00000275954 ODR4Q5SWX8 454 aa15.78■□□□□ 0.12
TMEM47-201ENST00000275954 C10orf67Q8IYJ2 551 aa15.78■□□□□ 0.12
TMEM47-201ENST00000275954 NEDD1Q8NHV4 660 aa15.78■□□□□ 0.12
TMEM47-201ENST00000275954 PIGOQ8TEQ8 1089 aa15.78■□□□□ 0.12
TMEM47-201ENST00000275954 CNKSR2Q8WXI2 1034 aa15.78■□□□□ 0.12
TMEM47-201ENST00000275954 BHMT2Q9H2M3 363 aa15.78■□□□□ 0.12
TMEM47-201ENST00000275954 TCRBV5S4A2TA0A5A2 114 aa15.78■□□□□ 0.12
TMEM47-201ENST00000275954 PLA2G4BP0C869 781 aa15.78■□□□□ 0.12
TMEM47-201ENST00000275954 TUBB2AQ13885 445 aa15.78■□□□□ 0.12
TMEM47-201ENST00000275954 LRCH2Q5VUJ6 765 aa15.78■□□□□ 0.12
TMEM47-201ENST00000275954 CCDC50Q8IVM0 306 aa15.78■□□□□ 0.12
TMEM47-201ENST00000275954 FAM76AQ8TAV0 307 aa15.78■□□□□ 0.12
TMEM47-201ENST00000275954 PANX2Q96RD6 677 aa15.78■□□□□ 0.12
TMEM47-201ENST00000275954 TUBB2BQ9BVA1 445 aa15.78■□□□□ 0.12
TMEM47-201ENST00000275954 RABGAP1Q9Y3P9 1069 aa15.78■□□□□ 0.12
TMEM47-201ENST00000275954 MED1Q15648 1581 aaPredicted RBP15.78■□□□□ 0.12
TMEM47-201ENST00000275954 BCL9LQ86UU0 1499 aa15.78■□□□□ 0.12
TMEM47-201ENST00000275954 GOLGA6BA6NDN3 693 aa15.78■□□□□ 0.12
TMEM47-201ENST00000275954 PRPF6O94906 941 aaKnown RBP15.78■□□□□ 0.12
TMEM47-201ENST00000275954 GYS2P54840 703 aa15.78■□□□□ 0.12
TMEM47-201ENST00000275954 MIER3Q7Z3K6 550 aa15.78■□□□□ 0.12
TMEM47-201ENST00000275954 NBPF11Q86T75 865 aa15.78■□□□□ 0.12
TMEM47-201ENST00000275954 NCAPG2Q86XI2 1143 aa15.78■□□□□ 0.12
TMEM47-201ENST00000275954 CHP1Q99653 195 aa15.78■□□□□ 0.12
TMEM47-201ENST00000275954 NHEJ1Q9H9Q4 299 aaPredicted RBP15.78■□□□□ 0.12
TMEM47-201ENST00000275954 SWAP70Q9UH65 585 aa15.78■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms