RNA–Protein interactions for RNA: ENST00000274071.6

PDGFC-201, Transcript of platelet derived growth factor C, humanhuman

TSL 1 (best)

Gene PDGFC, Length 2,987 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-201ENST00000274071 ASAP2O43150 1006 aa10.11□□□□□ -0.79
PDGFC-201ENST00000274071 GCP02774 474 aa10.11□□□□□ -0.79
PDGFC-201ENST00000274071 UBTFL1P0CB47 393 aaPredicted RBP10.11□□□□□ -0.79
PDGFC-201ENST00000274071 CALB2P22676 271 aa10.11□□□□□ -0.79
PDGFC-201ENST00000274071 SARSP49591 514 aaKnown RBP10.11□□□□□ -0.79
PDGFC-201ENST00000274071 RAD23BP54727 409 aa10.11□□□□□ -0.79
PDGFC-201ENST00000274071 ERMARDQ5T6L9 678 aa10.11□□□□□ -0.79
PDGFC-201ENST00000274071 CCDC129Q6ZRS4 1044 aa10.11□□□□□ -0.79
PDGFC-201ENST00000274071 CACNA2D4Q7Z3S7 1137 aa10.11□□□□□ -0.79
PDGFC-201ENST00000274071 MDM1Q8TC05 714 aa10.11□□□□□ -0.79
PDGFC-201ENST00000274071 DDX27Q96GQ7 796 aaKnown RBP10.11□□□□□ -0.79
PDGFC-201ENST00000274071 XPO6Q96QU8 1125 aaKnown RBP10.11□□□□□ -0.79
PDGFC-201ENST00000274071 PPP1R12CQ9BZL4 782 aa10.11□□□□□ -0.79
PDGFC-201ENST00000274071 CARD9Q9H257 536 aa10.11□□□□□ -0.79
PDGFC-201ENST00000274071 GJB4Q9NTQ9 266 aa10.11□□□□□ -0.79
PDGFC-201ENST00000274071 ZNHIT6Q9NWK9 470 aaKnown RBP10.11□□□□□ -0.79
PDGFC-201ENST00000274071 KCNH3Q9ULD8 1083 aa10.11□□□□□ -0.79
PDGFC-201ENST00000274071 CHMP2BQ9UQN3 213 aa10.11□□□□□ -0.79
PDGFC-201ENST00000274071 NFS1Q9Y697 457 aa10.11□□□□□ -0.79
PDGFC-201ENST00000274071 KIF28PB7ZC32 967 aa10.1□□□□□ -0.79
PDGFC-201ENST00000274071 TAF5LO75529 589 aa10.1□□□□□ -0.79
PDGFC-201ENST00000274071 HNRNPCP07910 306 aaKnown RBP eCLIP10.1□□□□□ -0.79
PDGFC-201ENST00000274071 SERPINB4P48594 390 aa10.1□□□□□ -0.79
PDGFC-201ENST00000274071 BIRC3Q13489 604 aa10.1□□□□□ -0.79
PDGFC-201ENST00000274071 PLS1Q14651 629 aa10.1□□□□□ -0.79
PDGFC-201ENST00000274071 TRADDQ15628 312 aa10.1□□□□□ -0.79
PDGFC-201ENST00000274071 CNPY1Q3B7I2 92 aa10.1□□□□□ -0.79
PDGFC-201ENST00000274071 NT5DC1Q5TFE4 455 aa10.1□□□□□ -0.79
PDGFC-201ENST00000274071 USPL1Q5W0Q7 1092 aa10.1□□□□□ -0.79
PDGFC-201ENST00000274071 RESP18Q5W5W9 173 aa10.1□□□□□ -0.79
PDGFC-201ENST00000274071 IRGCQ6NXR0 463 aa10.1□□□□□ -0.79
PDGFC-201ENST00000274071 RMDN2Q96LZ7 410 aa10.1□□□□□ -0.79
PDGFC-201ENST00000274071 CTAGE1Q96RT6 745 aa10.1□□□□□ -0.79
PDGFC-201ENST00000274071 PLCB1Q9NQ66 1216 aa10.1□□□□□ -0.79
PDGFC-201ENST00000274071 HSFX1Q9UBD0 423 aa10.1□□□□□ -0.79
PDGFC-201ENST00000274071 CIDEBQ9UHD4 219 aa10.1□□□□□ -0.79
PDGFC-201ENST00000274071 NOVA2Q9UNW9 492 aaKnown RBP10.1□□□□□ -0.79
PDGFC-201ENST00000274071 ATP8A1Q9Y2Q0 1164 aa10.1□□□□□ -0.79
PDGFC-201ENST00000274071 NFAT5O94916 1531 aa10.1□□□□□ -0.79
PDGFC-201ENST00000274071 HIP1O00291 1037 aa10.1□□□□□ -0.79
PDGFC-201ENST00000274071 CTNND1O60716 968 aaKnown RBP10.1□□□□□ -0.79
PDGFC-201ENST00000274071 ERCC5P28715 1186 aaPredicted RBP10.1□□□□□ -0.79
PDGFC-201ENST00000274071 CXCR5P32302 372 aa10.1□□□□□ -0.79
PDGFC-201ENST00000274071 HOXD12P35452 270 aa10.1□□□□□ -0.79
PDGFC-201ENST00000274071 CCNFP41002 786 aa10.1□□□□□ -0.79
PDGFC-201ENST00000274071 SESN3P58005 492 aa10.1□□□□□ -0.79
PDGFC-201ENST00000274071 ZNF844Q08AG5 666 aa10.1□□□□□ -0.79
PDGFC-201ENST00000274071 GALNTL6Q49A17 601 aa10.1□□□□□ -0.79
PDGFC-201ENST00000274071 RASIP1Q5U651 963 aa10.1□□□□□ -0.79
PDGFC-201ENST00000274071 DUS1LQ6P1R4 473 aaKnown RBP10.1□□□□□ -0.79
PDGFC-201ENST00000274071 ZNF662Q6ZS27 426 aa10.1□□□□□ -0.79
PDGFC-201ENST00000274071 ZNF365Q70YC5 407 aa10.1□□□□□ -0.79
PDGFC-201ENST00000274071 KRT28Q7Z3Y7 464 aa10.1□□□□□ -0.79
PDGFC-201ENST00000274071 PALB2Q86YC2 1186 aa10.1□□□□□ -0.79
PDGFC-201ENST00000274071 IL17REQ8NFR9 667 aa10.1□□□□□ -0.79
PDGFC-201ENST00000274071 FBF1Q8TES7 1133 aa10.1□□□□□ -0.79
PDGFC-201ENST00000274071 DNAJC9Q8WXX5 260 aa10.1□□□□□ -0.79
PDGFC-201ENST00000274071 GPCPD1Q9NPB8 672 aa10.1□□□□□ -0.79
PDGFC-201ENST00000274071 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.1□□□□□ -0.79
PDGFC-201ENST00000274071 INIPQ9NRY2 104 aa10.1□□□□□ -0.79
PDGFC-201ENST00000274071 RBM12Q9NTZ6 932 aaKnown RBP10.1□□□□□ -0.79
PDGFC-201ENST00000274071 SH3GLB1Q9Y371 365 aa10.1□□□□□ -0.79
PDGFC-201ENST00000274071 MACROD2A1Z1Q3 448 aa10.09□□□□□ -0.79
PDGFC-201ENST00000274071 E7ENQ6 273 aa10.09□□□□□ -0.79
PDGFC-201ENST00000274071 ZFXP17010 805 aaPredicted RBP10.09□□□□□ -0.79
PDGFC-201ENST00000274071 GBP1P32455 592 aa10.09□□□□□ -0.79
PDGFC-201ENST00000274071 PLCD1P51178 756 aa10.09□□□□□ -0.79
PDGFC-201ENST00000274071 STX17P56962 302 aa10.09□□□□□ -0.79
PDGFC-201ENST00000274071 MAGOHP61326 146 aaKnown RBP10.09□□□□□ -0.79
PDGFC-201ENST00000274071 LSAMPQ13449 338 aa10.09□□□□□ -0.79
PDGFC-201ENST00000274071 SPATA1Q5VX52 437 aa10.09□□□□□ -0.79
PDGFC-201ENST00000274071 LRIG3Q6UXM1 1119 aa10.09□□□□□ -0.79
PDGFC-201ENST00000274071 MAGOHBQ96A72 148 aaKnown RBP10.09□□□□□ -0.79
PDGFC-201ENST00000274071 HIC2Q96JB3 615 aa10.09□□□□□ -0.79
PDGFC-201ENST00000274071 PSMB7Q99436 277 aa10.09□□□□□ -0.79
PDGFC-201ENST00000274071 ELAC2Q9BQ52 826 aaKnown RBP10.09□□□□□ -0.79
PDGFC-201ENST00000274071 FAM192AQ9GZU8 254 aa10.09□□□□□ -0.79
PDGFC-201ENST00000274071 PHAXQ9H814 394 aaKnown RBP10.09□□□□□ -0.79
PDGFC-201ENST00000274071 RNPEPL1Q9HAU8 725 aa10.09□□□□□ -0.79
PDGFC-201ENST00000274071 TRPV5Q9NQA5 729 aa10.09□□□□□ -0.79
PDGFC-201ENST00000274071 TMEM247A6NEH6 219 aa10.09□□□□□ -0.79
PDGFC-201ENST00000274071 IPO5O00410 1097 aaKnown RBP10.09□□□□□ -0.79
PDGFC-201ENST00000274071 PRC1O43663 620 aa10.09□□□□□ -0.79
PDGFC-201ENST00000274071 WFS1O76024 890 aa10.09□□□□□ -0.79
PDGFC-201ENST00000274071 SHBGP04278 402 aa10.09□□□□□ -0.79
PDGFC-201ENST00000274071 TPBGLP0DKB5 382 aa10.09□□□□□ -0.79
PDGFC-201ENST00000274071 YY1P25490 414 aa10.09□□□□□ -0.79
PDGFC-201ENST00000274071 HSPA9P38646 679 aaKnown RBP10.09□□□□□ -0.79
PDGFC-201ENST00000274071 CCT6AP40227 531 aaKnown RBP10.09□□□□□ -0.79
PDGFC-201ENST00000274071 ZNF131P52739 623 aa10.09□□□□□ -0.79
PDGFC-201ENST00000274071 NLRP5P59047 1200 aa10.09□□□□□ -0.79
PDGFC-201ENST00000274071 COPS2P61201 443 aa10.09□□□□□ -0.79
PDGFC-201ENST00000274071 NEXNQ0ZGT2 675 aa10.09□□□□□ -0.79
PDGFC-201ENST00000274071 CDKAL1Q5VV42 579 aa10.09□□□□□ -0.79
PDGFC-201ENST00000274071 ASRGL1Q7L266 308 aa10.09□□□□□ -0.79
PDGFC-201ENST00000274071 MIGA2Q7L4E1 593 aa10.09□□□□□ -0.79
PDGFC-201ENST00000274071 CLMNQ96JQ2 1002 aa10.09□□□□□ -0.79
PDGFC-201ENST00000274071 TRAIPQ9BWF2 469 aa10.09□□□□□ -0.79
PDGFC-201ENST00000274071 RAB17Q9H0T7 212 aa10.09□□□□□ -0.79
PDGFC-201ENST00000274071 ETNK2Q9NVF9 386 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms