RNA–Protein interactions for RNA: ENST00000273156.11

SEC22C-202, Transcript of SEC22 homolog C, vesicle trafficking protein, humanhuman

TSL 1 (best) BASIC

Gene SEC22C, Length 1,608 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22C-202ENST00000273156 CCDC148Q8NFR7 591 aa20.34■□□□□ 0.85
SEC22C-202ENST00000273156 CCDC12Q8WUD4 166 aaPredicted RBP20.34■□□□□ 0.85
SEC22C-202ENST00000273156 POLR3EQ9NVU0 708 aa20.34■□□□□ 0.85
SEC22C-202ENST00000273156 TRIOBPQ9H2D6 2365 aa20.34■□□□□ 0.85
SEC22C-202ENST00000273156 RANBP2P49792 3224 aaKnown RBP20.33■□□□□ 0.85
SEC22C-202ENST00000273156 ASB14A6NK59 587 aa20.33■□□□□ 0.84
SEC22C-202ENST00000273156 FXR1P51114 621 aaKnown RBP eCLIP20.33■□□□□ 0.84
SEC22C-202ENST00000273156 GALNT17Q6IS24 598 aa20.33■□□□□ 0.84
SEC22C-202ENST00000273156 FAM133AQ8N9E0 248 aa20.33■□□□□ 0.84
SEC22C-202ENST00000273156 A1CFQ9NQ94 594 aaKnown RBP20.33■□□□□ 0.84
SEC22C-202ENST00000273156 BARHL2Q9NY43 387 aa20.33■□□□□ 0.84
SEC22C-202ENST00000273156 ZMYND8Q9ULU4 1186 aaPredicted RBP20.33■□□□□ 0.84
SEC22C-202ENST00000273156 hCG_1984214I3L0E3 225 aa20.32■□□□□ 0.84
SEC22C-202ENST00000273156 YEATS4O95619 227 aa20.32■□□□□ 0.84
SEC22C-202ENST00000273156 TAL1P17542 331 aaPredicted RBP20.32■□□□□ 0.84
SEC22C-202ENST00000273156 ACVR2BQ13705 512 aa20.32■□□□□ 0.84
SEC22C-202ENST00000273156 HEATR3Q7Z4Q2 680 aa20.32■□□□□ 0.84
SEC22C-202ENST00000273156 HOMER1Q86YM7 354 aa20.32■□□□□ 0.84
SEC22C-202ENST00000273156 ZNF713Q8N859 430 aaPredicted RBP20.32■□□□□ 0.84
SEC22C-202ENST00000273156 GDF15Q99988 308 aa20.32■□□□□ 0.84
SEC22C-202ENST00000273156 GZF1Q9H116 711 aaPredicted RBP20.32■□□□□ 0.84
SEC22C-202ENST00000273156 CPVLQ9H3G5 476 aa20.32■□□□□ 0.84
SEC22C-202ENST00000273156 SPC25Q9HBM1 224 aa20.32■□□□□ 0.84
SEC22C-202ENST00000273156 CDKN2AIPQ9NXV6 580 aaPredicted RBP20.32■□□□□ 0.84
SEC22C-202ENST00000273156 PRKAG2Q9UGJ0 569 aa20.32■□□□□ 0.84
SEC22C-202ENST00000273156 ZHX1Q9UKY1 873 aaPredicted RBP20.32■□□□□ 0.84
SEC22C-202ENST00000273156 SLC16A2P36021 539 aa20.31■□□□□ 0.84
SEC22C-202ENST00000273156 RILPL1Q5EBL4 403 aa20.31■□□□□ 0.84
SEC22C-202ENST00000273156 C1orf53Q5VUE5 145 aa20.31■□□□□ 0.84
SEC22C-202ENST00000273156 TTBK2Q6IQ55 1244 aa20.31■□□□□ 0.84
SEC22C-202ENST00000273156 ARMCX2Q7L311 632 aa20.31■□□□□ 0.84
SEC22C-202ENST00000273156 SYAP1Q96A49 352 aaPredicted RBP20.31■□□□□ 0.84
SEC22C-202ENST00000273156 PIGSQ96S52 555 aa20.31■□□□□ 0.84
SEC22C-202ENST00000273156 TSEN34Q9BSV6 310 aaKnown RBP20.31■□□□□ 0.84
SEC22C-202ENST00000273156 PHF24Q9UPV7 400 aa20.31■□□□□ 0.84
SEC22C-202ENST00000273156 DUSP11O75319 330 aaKnown RBP20.31■□□□□ 0.84
SEC22C-202ENST00000273156 ADCYAP1R1P41586 468 aa20.31■□□□□ 0.84
SEC22C-202ENST00000273156 NASPP49321 788 aaPredicted RBP20.31■□□□□ 0.84
SEC22C-202ENST00000273156 ATN1P54259 1190 aaPredicted RBP20.31■□□□□ 0.84
SEC22C-202ENST00000273156 NR5A1Q13285 461 aa20.31■□□□□ 0.84
SEC22C-202ENST00000273156 STK38Q15208 465 aa20.31■□□□□ 0.84
SEC22C-202ENST00000273156 SF3A1Q15459 793 aaKnown RBP20.31■□□□□ 0.84
SEC22C-202ENST00000273156 WWC2Q6AWC2 1192 aa20.31■□□□□ 0.84
SEC22C-202ENST00000273156 SLC39A5Q6ZMH5 540 aa20.31■□□□□ 0.84
SEC22C-202ENST00000273156 ADGRF4Q8IZF3 695 aa20.31■□□□□ 0.84
SEC22C-202ENST00000273156 KCNG4Q8TDN1 519 aa20.31■□□□□ 0.84
SEC22C-202ENST00000273156 OXER1Q8TDS5 423 aa20.31■□□□□ 0.84
SEC22C-202ENST00000273156 GPKOWQ92917 476 aaPredicted RBP eCLIP20.31■□□□□ 0.84
SEC22C-202ENST00000273156 CLIC4Q9Y696 253 aa20.31■□□□□ 0.84
SEC22C-202ENST00000273156 LOC102724159A0A0B4J2E5 919 aa20.3■□□□□ 0.84
SEC22C-202ENST00000273156 STXBP3O00186 592 aa20.3■□□□□ 0.84
SEC22C-202ENST00000273156 SYN1P17600 705 aa20.3■□□□□ 0.84
SEC22C-202ENST00000273156 GSE1Q14687 1217 aa20.3■□□□□ 0.84
SEC22C-202ENST00000273156 PWP2Q15269 919 aaKnown RBP20.3■□□□□ 0.84
SEC22C-202ENST00000273156 CAVIN1Q6NZI2 390 aaKnown RBP20.3■□□□□ 0.84
SEC22C-202ENST00000273156 LINC00301Q8NCQ3 95 aa20.3■□□□□ 0.84
SEC22C-202ENST00000273156 FTOQ9C0B1 505 aaKnown RBP eCLIP20.3■□□□□ 0.84
SEC22C-202ENST00000273156 JMJD4Q9H9V9 463 aa20.3■□□□□ 0.84
SEC22C-202ENST00000273156 CYP39A1Q9NYL5 469 aa20.3■□□□□ 0.84
SEC22C-202ENST00000273156 PCDH10Q9P2E7 1040 aa20.3■□□□□ 0.84
SEC22C-202ENST00000273156 ADD3Q9UEY8 706 aaKnown RBP20.3■□□□□ 0.84
SEC22C-202ENST00000273156 PCDHA4Q9UN74 947 aa20.3■□□□□ 0.84
SEC22C-202ENST00000273156 PNMA6FA0A0J9YX94 578 aa20.29■□□□□ 0.84
SEC22C-202ENST00000273156 PGK1P00558 417 aa20.29■□□□□ 0.84
SEC22C-202ENST00000273156 RTP1P59025 263 aa20.29■□□□□ 0.84
SEC22C-202ENST00000273156 SNAP25P60880 206 aa20.29■□□□□ 0.84
SEC22C-202ENST00000273156 CNTN2Q02246 1040 aa20.29■□□□□ 0.84
SEC22C-202ENST00000273156 SNX17Q15036 470 aa20.29■□□□□ 0.84
SEC22C-202ENST00000273156 FGD4Q96M96 766 aa20.29■□□□□ 0.84
SEC22C-202ENST00000273156 LBHD1Q9BQE6 289 aaPredicted RBP20.29■□□□□ 0.84
SEC22C-202ENST00000273156 MAF1Q9H063 256 aa20.29■□□□□ 0.84
SEC22C-202ENST00000273156 NOL7Q9UMY1 257 aaKnown RBP20.29■□□□□ 0.84
SEC22C-202ENST00000273156 MAGEA10P43363 369 aaPredicted RBP20.28■□□□□ 0.84
SEC22C-202ENST00000273156 ME1P48163 572 aa20.28■□□□□ 0.84
SEC22C-202ENST00000273156 NAPAP54920 295 aa20.28■□□□□ 0.84
SEC22C-202ENST00000273156 CCDC144BQ3MJ40 725 aa20.28■□□□□ 0.84
SEC22C-202ENST00000273156 TPRNQ4KMQ1 711 aa20.28■□□□□ 0.84
SEC22C-202ENST00000273156 NSMFQ6X4W1 530 aa20.28■□□□□ 0.84
SEC22C-202ENST00000273156 BLIDQ8IZY5 108 aa20.28■□□□□ 0.84
SEC22C-202ENST00000273156 C6orf50Q9HD87 102 aa20.28■□□□□ 0.84
SEC22C-202ENST00000273156 MOXD2PA6NHM9 499 aa20.27■□□□□ 0.84
SEC22C-202ENST00000273156 SPTLC2O15270 562 aa20.27■□□□□ 0.84
SEC22C-202ENST00000273156 ADAMTS4O75173 837 aa20.27■□□□□ 0.84
SEC22C-202ENST00000273156 GNA11P29992 359 aa20.27■□□□□ 0.84
SEC22C-202ENST00000273156 SLC39A14Q15043 492 aa20.27■□□□□ 0.84
SEC22C-202ENST00000273156 NPY5RQ15761 445 aa20.27■□□□□ 0.84
SEC22C-202ENST00000273156 MUM1L1Q5H9M0 696 aa20.27■□□□□ 0.84
SEC22C-202ENST00000273156 PCSK9Q8NBP7 692 aaKnown RBP20.27■□□□□ 0.84
SEC22C-202ENST00000273156 DAGLBQ8NCG7 672 aa20.27■□□□□ 0.84
SEC22C-202ENST00000273156 MPHOSPH6Q99547 160 aaKnown RBP20.27■□□□□ 0.84
SEC22C-202ENST00000273156 ATP11BQ9Y2G3 1177 aa20.27■□□□□ 0.84
SEC22C-202ENST00000273156 ZNFX1Q9P2E3 1918 aaKnown RBP20.27■□□□□ 0.84
SEC22C-202ENST00000273156 SOWAHBA6NEL2 793 aa20.27■□□□□ 0.83
SEC22C-202ENST00000273156 ZBTB5O15062 677 aa20.27■□□□□ 0.83
SEC22C-202ENST00000273156 BICD2Q8TD16 824 aa20.27■□□□□ 0.83
SEC22C-202ENST00000273156 FERMT2Q96AC1 680 aa20.27■□□□□ 0.83
SEC22C-202ENST00000273156 MTMR8Q96EF0 704 aa20.27■□□□□ 0.83
SEC22C-202ENST00000273156 PGBD1Q96JS3 809 aa20.27■□□□□ 0.83
SEC22C-202ENST00000273156 UBE2OQ9C0C9 1292 aaKnown RBP20.27■□□□□ 0.83
SEC22C-202ENST00000273156 ZMYND12Q9H0C1 365 aa20.27■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms