RNA–Protein interactions for RNA: ENST00000263388.6

NOTCH3-201, Transcript of notch 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NOTCH3, Length 8,666 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH3-201ENST00000263388 MAP3K7CLP57077 242 aa18.95■□□□□ 0.62
NOTCH3-201ENST00000263388 FAM160B1Q5W0V3 765 aa18.95■□□□□ 0.62
NOTCH3-201ENST00000263388 CCDC151A5D8V7 595 aa18.95■□□□□ 0.62
NOTCH3-201ENST00000263388 LRRIQ4A6NIV6 560 aa18.95■□□□□ 0.62
NOTCH3-201ENST00000263388 PDIA3P30101 505 aaKnown RBP18.95■□□□□ 0.62
NOTCH3-201ENST00000263388 ADD1P35611 737 aaKnown RBP18.95■□□□□ 0.62
NOTCH3-201ENST00000263388 TBX22Q9Y458 520 aa18.95■□□□□ 0.62
NOTCH3-201ENST00000263388 CDC42BPGQ6DT37 1551 aa18.95■□□□□ 0.62
NOTCH3-201ENST00000263388 PTPREP23469 700 aa18.95■□□□□ 0.62
NOTCH3-201ENST00000263388 STK32BQ9NY57 414 aa18.95■□□□□ 0.62
NOTCH3-201ENST00000263388 GCNT4Q9P109 453 aa18.95■□□□□ 0.62
NOTCH3-201ENST00000263388 HSPA6P17066 643 aa18.95■□□□□ 0.62
NOTCH3-201ENST00000263388 PEX19P40855 299 aa18.95■□□□□ 0.62
NOTCH3-201ENST00000263388 EXOC8Q8IYI6 725 aa18.95■□□□□ 0.62
NOTCH3-201ENST00000263388 CASP14P31944 242 aa18.95■□□□□ 0.62
NOTCH3-201ENST00000263388 YWHAGP61981 247 aaKnown RBP eCLIP18.95■□□□□ 0.62
NOTCH3-201ENST00000263388 SGO2Q562F6 1265 aa18.95■□□□□ 0.62
NOTCH3-201ENST00000263388 ANKRD36BP1Q96IX9 119 aa18.95■□□□□ 0.62
NOTCH3-201ENST00000263388 FMO2Q99518 471 aa18.95■□□□□ 0.62
NOTCH3-201ENST00000263388 SCHIP1Q9P0W5 487 aaPredicted RBP18.95■□□□□ 0.62
NOTCH3-201ENST00000263388 ODR4Q5SWX8 454 aa18.95■□□□□ 0.62
NOTCH3-201ENST00000263388 CAPN12Q6ZSI9 719 aa18.95■□□□□ 0.62
NOTCH3-201ENST00000263388 BANK1Q8NDB2 785 aa18.95■□□□□ 0.62
NOTCH3-201ENST00000263388 DEUP1Q05D60 604 aa18.94■□□□□ 0.62
NOTCH3-201ENST00000263388 TDRD7Q8NHU6 1098 aaKnown RBP18.94■□□□□ 0.62
NOTCH3-201ENST00000263388 ZC3H15Q8WU90 426 aaKnown RBP18.94■□□□□ 0.62
NOTCH3-201ENST00000263388 TTC1Q99614 292 aa18.94■□□□□ 0.62
NOTCH3-201ENST00000263388 NUB1Q9Y5A7 615 aa18.94■□□□□ 0.62
NOTCH3-201ENST00000263388 BTBD18B2RXH4 712 aa18.94■□□□□ 0.62
NOTCH3-201ENST00000263388 KPNA2P52292 529 aaKnown RBP18.94■□□□□ 0.62
NOTCH3-201ENST00000263388 FKBP3Q00688 224 aaKnown RBP18.94■□□□□ 0.62
NOTCH3-201ENST00000263388 SEPT2Q15019 361 aa18.94■□□□□ 0.62
NOTCH3-201ENST00000263388 SLC39A14Q15043 492 aa18.94■□□□□ 0.62
NOTCH3-201ENST00000263388 SEC23IPQ9Y6Y8 1000 aaKnown RBP18.94■□□□□ 0.62
NOTCH3-201ENST00000263388 MAPK4P31152 587 aa18.94■□□□□ 0.62
NOTCH3-201ENST00000263388 PABPC4Q13310 644 aaKnown RBP eCLIP18.94■□□□□ 0.62
NOTCH3-201ENST00000263388 TMTC4Q5T4D3 741 aa18.94■□□□□ 0.62
NOTCH3-201ENST00000263388 CCDC127Q96BQ5 260 aa18.94■□□□□ 0.62
NOTCH3-201ENST00000263388 HNRNPDLO14979 420 aaKnown RBP18.94■□□□□ 0.62
NOTCH3-201ENST00000263388 CPP00450 1065 aa18.94■□□□□ 0.62
NOTCH3-201ENST00000263388 ZNF658Q5TYW1 1059 aaPredicted RBP18.94■□□□□ 0.62
NOTCH3-201ENST00000263388 GPKOWQ92917 476 aaPredicted RBP eCLIP18.94■□□□□ 0.62
NOTCH3-201ENST00000263388 MRPL47Q9HD33 250 aaKnown RBP18.94■□□□□ 0.62
NOTCH3-201ENST00000263388 KCNA6P17658 529 aa18.94■□□□□ 0.62
NOTCH3-201ENST00000263388 PDE1BQ01064 536 aa18.94■□□□□ 0.62
NOTCH3-201ENST00000263388 MESDQ14696 234 aa18.94■□□□□ 0.62
NOTCH3-201ENST00000263388 LRRC47Q8N1G4 583 aaKnown RBP18.94■□□□□ 0.62
NOTCH3-201ENST00000263388 FBXO41Q8TF61 875 aa18.94■□□□□ 0.62
NOTCH3-201ENST00000263388 ESYT2A0FGR8 921 aa18.93■□□□□ 0.62
NOTCH3-201ENST00000263388 TLR3O15455 904 aaKnown RBP18.93■□□□□ 0.62
NOTCH3-201ENST00000263388 TTI1O43156 1089 aa18.93■□□□□ 0.62
NOTCH3-201ENST00000263388 AFPP02771 609 aaKnown RBP18.93■□□□□ 0.62
NOTCH3-201ENST00000263388 EIF3BP55884 814 aaKnown RBP18.93■□□□□ 0.62
NOTCH3-201ENST00000263388 NT5C1BQ96P26 610 aa18.93■□□□□ 0.62
NOTCH3-201ENST00000263388 XPOTO43592 962 aaKnown RBP18.93■□□□□ 0.62
NOTCH3-201ENST00000263388 PTPROQ16827 1216 aa18.93■□□□□ 0.62
NOTCH3-201ENST00000263388 SLC35F6Q8N357 371 aa18.93■□□□□ 0.62
NOTCH3-201ENST00000263388 EPB41L5Q9HCM4 733 aa18.93■□□□□ 0.62
NOTCH3-201ENST00000263388 FAM8A1Q9UBU6 413 aa18.93■□□□□ 0.62
NOTCH3-201ENST00000263388 RWDD2AQ9UIY3 292 aa18.93■□□□□ 0.62
NOTCH3-201ENST00000263388 PCDHA1Q9Y5I3 950 aa18.93■□□□□ 0.62
NOTCH3-201ENST00000263388 ATP7BP35670 1465 aa18.93■□□□□ 0.62
NOTCH3-201ENST00000263388 GCFC2P16383 781 aaKnown RBP18.93■□□□□ 0.62
NOTCH3-201ENST00000263388 RCN2Q14257 317 aa18.93■□□□□ 0.62
NOTCH3-201ENST00000263388 MAN2A1Q16706 1144 aa18.93■□□□□ 0.62
NOTCH3-201ENST00000263388 CENPKQ9BS16 269 aa18.93■□□□□ 0.62
NOTCH3-201ENST00000263388 SCINQ9Y6U3 715 aa18.93■□□□□ 0.62
NOTCH3-201ENST00000263388 CLIC6Q96NY7 704 aa18.93■□□□□ 0.62
NOTCH3-201ENST00000263388 MED7O43513 233 aa18.93■□□□□ 0.62
NOTCH3-201ENST00000263388 FMNL1O95466 1100 aaPredicted RBP18.93■□□□□ 0.62
NOTCH3-201ENST00000263388 DMTNQ08495 405 aa18.93■□□□□ 0.62
NOTCH3-201ENST00000263388 SMYD2Q9NRG4 433 aa18.93■□□□□ 0.62
NOTCH3-201ENST00000263388 PCDHA4Q9UN74 947 aa18.93■□□□□ 0.62
NOTCH3-201ENST00000263388 PPIP5K2O43314 1243 aa18.93■□□□□ 0.62
NOTCH3-201ENST00000263388 CIAO1O76071 339 aa18.92■□□□□ 0.62
NOTCH3-201ENST00000263388 TTLL1O95922 423 aa18.92■□□□□ 0.62
NOTCH3-201ENST00000263388 UBE3CQ15386 1083 aa18.92■□□□□ 0.62
NOTCH3-201ENST00000263388 ZNF827Q17R98 1081 aa18.92■□□□□ 0.62
NOTCH3-201ENST00000263388 PLA2G4DQ86XP0 818 aa18.92■□□□□ 0.62
NOTCH3-201ENST00000263388 GJA10Q969M2 543 aa18.92■□□□□ 0.62
NOTCH3-201ENST00000263388 ZNF233A6NK53 670 aa18.92■□□□□ 0.62
NOTCH3-201ENST00000263388 MSH2P43246 934 aa18.92■□□□□ 0.62
NOTCH3-201ENST00000263388 CUL1Q13616 776 aa18.92■□□□□ 0.62
NOTCH3-201ENST00000263388 ZNF496Q96IT1 587 aaPredicted RBP18.92■□□□□ 0.62
NOTCH3-201ENST00000263388 STX1BP61266 288 aa18.92■□□□□ 0.62
NOTCH3-201ENST00000263388 GTF2IP78347 998 aa18.92■□□□□ 0.62
NOTCH3-201ENST00000263388 SLMAPQ14BN4 828 aa18.92■□□□□ 0.62
NOTCH3-201ENST00000263388 ABL1P00519 1130 aa18.92■□□□□ 0.62
NOTCH3-201ENST00000263388 ICA1Q05084 483 aa18.92■□□□□ 0.62
NOTCH3-201ENST00000263388 TFDP1Q14186 410 aa18.92■□□□□ 0.62
NOTCH3-201ENST00000263388 ERBB4Q15303 1308 aa18.92■□□□□ 0.62
NOTCH3-201ENST00000263388 GPC4O75487 556 aa18.92■□□□□ 0.62
NOTCH3-201ENST00000263388 ATP8A1Q9Y2Q0 1164 aa18.92■□□□□ 0.62
NOTCH3-201ENST00000263388 CTNND1O60716 968 aaKnown RBP18.91■□□□□ 0.62
NOTCH3-201ENST00000263388 CACTINQ8WUQ7 758 aaKnown RBP18.91■□□□□ 0.62
NOTCH3-201ENST00000263388 RPS6KC1Q96S38 1066 aa18.91■□□□□ 0.62
NOTCH3-201ENST00000263388 RRP15Q9Y3B9 282 aaKnown RBP18.91■□□□□ 0.62
NOTCH3-201ENST00000263388 BBS5Q8N3I7 341 aa18.91■□□□□ 0.62
NOTCH3-201ENST00000263388 ATP6V0A1Q93050 837 aa18.91■□□□□ 0.62
NOTCH3-201ENST00000263388 JPH2Q9BR39 696 aaPredicted RBP18.91■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms