RNA–Protein interactions for RNA: ENST00000263073.10

SMG6-201, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG6, Length 5,960 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-201ENST00000263073 CCNL1Q9UK58 526 aaPredicted RBP13.11□□□□□ -0.31
SMG6-201ENST00000263073 FMNL1O95466 1100 aaPredicted RBP13.11□□□□□ -0.31
SMG6-201ENST00000263073 ERFP50548 548 aa13.11□□□□□ -0.31
SMG6-201ENST00000263073 RESTQ13127 1097 aa13.11□□□□□ -0.31
SMG6-201ENST00000263073 ARHGEF16Q5VV41 709 aa13.11□□□□□ -0.31
SMG6-201ENST00000263073 CDAN1Q8IWY9 1227 aa13.11□□□□□ -0.31
SMG6-201ENST00000263073 DYDC2Q96IM9 177 aa13.11□□□□□ -0.31
SMG6-201ENST00000263073 PCDHB4Q9Y5E5 795 aa13.11□□□□□ -0.31
SMG6-201ENST00000263073 hCG_2014768A0A024R1R8 64 aa13.11□□□□□ -0.31
SMG6-201ENST00000263073 GOLGA8SH3BPF8 625 aa13.11□□□□□ -0.31
SMG6-201ENST00000263073 IKBKBO14920 756 aa13.11□□□□□ -0.31
SMG6-201ENST00000263073 NCF2P19878 526 aaPredicted RBP13.11□□□□□ -0.31
SMG6-201ENST00000263073 MAPK4P31152 587 aa13.11□□□□□ -0.31
SMG6-201ENST00000263073 ATP8A2Q9NTI2 1148 aa13.11□□□□□ -0.31
SMG6-201ENST00000263073 MAST3O60307 1309 aa13.11□□□□□ -0.31
SMG6-201ENST00000263073 ESYT3A0FGR9 886 aa13.11□□□□□ -0.31
SMG6-201ENST00000263073 CCDC151A5D8V7 595 aa13.11□□□□□ -0.31
SMG6-201ENST00000263073 PGRMC1O00264 195 aaKnown RBP13.11□□□□□ -0.31
SMG6-201ENST00000263073 ATP8B1O43520 1251 aa13.11□□□□□ -0.31
SMG6-201ENST00000263073 DOK7Q18PE1 504 aa13.11□□□□□ -0.31
SMG6-201ENST00000263073 MFSD14BQ5SR56 506 aa13.11□□□□□ -0.31
SMG6-201ENST00000263073 HP1BP3Q5SSJ5 553 aaPredicted RBP13.11□□□□□ -0.31
SMG6-201ENST00000263073 ODR4Q5SWX8 454 aa13.11□□□□□ -0.31
SMG6-201ENST00000263073 ZNF658Q5TYW1 1059 aaPredicted RBP13.11□□□□□ -0.31
SMG6-201ENST00000263073 RFX8Q6ZV50 586 aa13.11□□□□□ -0.31
SMG6-201ENST00000263073 LARP4BQ92615 738 aaKnown RBP13.11□□□□□ -0.31
SMG6-201ENST00000263073 LBHD1Q9BQE6 289 aaPredicted RBP13.11□□□□□ -0.31
SMG6-201ENST00000263073 RIOK1Q9BRS2 568 aaKnown RBP13.11□□□□□ -0.31
SMG6-201ENST00000263073 PUS7LQ9H0K6 701 aaKnown RBP13.11□□□□□ -0.31
SMG6-201ENST00000263073 SUDS3Q9H7L9 328 aaPredicted RBP13.11□□□□□ -0.31
SMG6-201ENST00000263073 POLR3EQ9NVU0 708 aa13.11□□□□□ -0.31
SMG6-201ENST00000263073 ESYT2A0FGR8 921 aa13.1□□□□□ -0.31
SMG6-201ENST00000263073 CAPN9O14815 690 aa13.1□□□□□ -0.31
SMG6-201ENST00000263073 NCK2O43639 380 aa13.1□□□□□ -0.31
SMG6-201ENST00000263073 IGBP1P78318 339 aa13.1□□□□□ -0.31
SMG6-201ENST00000263073 ASPHQ12797 758 aa13.1□□□□□ -0.31
SMG6-201ENST00000263073 NLRX1Q86UT6 975 aa13.1□□□□□ -0.31
SMG6-201ENST00000263073 IQCDQ96DY2 449 aa13.1□□□□□ -0.31
SMG6-201ENST00000263073 PAGE5Q96GU1 130 aa13.1□□□□□ -0.31
SMG6-201ENST00000263073 ABCC10Q5T3U5 1492 aa13.1□□□□□ -0.31
SMG6-201ENST00000263073 EDC4Q6P2E9 1401 aaKnown RBP13.1□□□□□ -0.31
SMG6-201ENST00000263073 TRIM49BA6NDI0 452 aa13.1□□□□□ -0.31
SMG6-201ENST00000263073 BASP1P80723 227 aaKnown RBP13.1□□□□□ -0.31
SMG6-201ENST00000263073 SMAD1Q15797 465 aaKnown RBP13.1□□□□□ -0.31
SMG6-201ENST00000263073 TMEM259Q4ZIN3 620 aa13.1□□□□□ -0.31
SMG6-201ENST00000263073 PARP10Q53GL7 1025 aa13.1□□□□□ -0.31
SMG6-201ENST00000263073 BEND6Q5SZJ8 279 aaPredicted RBP13.1□□□□□ -0.31
SMG6-201ENST00000263073 NSMCE1Q8WV22 266 aa13.1□□□□□ -0.31
SMG6-201ENST00000263073 BCAP29Q9UHQ4 241 aa13.1□□□□□ -0.31
SMG6-201ENST00000263073 ZBED4O75132 1171 aa13.1□□□□□ -0.31
SMG6-201ENST00000263073 SETSIPP0DME0 302 aa13.1□□□□□ -0.31
SMG6-201ENST00000263073 PLS3P13797 630 aa13.1□□□□□ -0.31
SMG6-201ENST00000263073 APBA1Q02410 837 aa13.1□□□□□ -0.31
SMG6-201ENST00000263073 TSTA3Q13630 321 aaPredicted RBP13.1□□□□□ -0.31
SMG6-201ENST00000263073 NUGGCQ68CJ6 796 aa13.1□□□□□ -0.31
SMG6-201ENST00000263073 METTL14Q9HCE5 456 aaKnown RBP13.1□□□□□ -0.31
SMG6-201ENST00000263073 TCP10L2B9ZVM9 353 aa13.1□□□□□ -0.31
SMG6-201ENST00000263073 WDR46O15213 610 aaKnown RBP13.1□□□□□ -0.31
SMG6-201ENST00000263073 KIF11P52732 1056 aa13.1□□□□□ -0.31
SMG6-201ENST00000263073 PHEXP78562 749 aa13.1□□□□□ -0.31
SMG6-201ENST00000263073 ARHGAP4P98171 946 aa13.1□□□□□ -0.31
SMG6-201ENST00000263073 FAM47EQ6ZV65 393 aa13.1□□□□□ -0.31
SMG6-201ENST00000263073 GSDMAQ96QA5 445 aa13.1□□□□□ -0.31
SMG6-201ENST00000263073 PLEKHF1Q96S99 279 aa13.1□□□□□ -0.31
SMG6-201ENST00000263073 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.1□□□□□ -0.31
SMG6-201ENST00000263073 SCOCQ9UIL1 159 aa13.1□□□□□ -0.31
SMG6-201ENST00000263073 LRRIQ4A6NIV6 560 aa13.1□□□□□ -0.31
SMG6-201ENST00000263073 MAP3K7O43318 606 aa13.1□□□□□ -0.31
SMG6-201ENST00000263073 HOXB7P09629 217 aa13.1□□□□□ -0.31
SMG6-201ENST00000263073 CUL4AQ13619 759 aa13.1□□□□□ -0.31
SMG6-201ENST00000263073 C10orf76Q5T2E6 689 aa13.1□□□□□ -0.31
SMG6-201ENST00000263073 MCTP2Q6DN12 878 aa13.1□□□□□ -0.31
SMG6-201ENST00000263073 SUPT20HQ8NEM7 779 aa13.1□□□□□ -0.31
SMG6-201ENST00000263073 FBXO41Q8TF61 875 aa13.1□□□□□ -0.31
SMG6-201ENST00000263073 RMDN2Q96LZ7 410 aa13.1□□□□□ -0.31
SMG6-201ENST00000263073 NOD1Q9Y239 953 aa13.1□□□□□ -0.31
SMG6-201ENST00000263073 CHD1O14646 1710 aa13.09□□□□□ -0.31
SMG6-201ENST00000263073 ECEL1O95672 775 aa13.09□□□□□ -0.31
SMG6-201ENST00000263073 SNAP25P60880 206 aa13.09□□□□□ -0.31
SMG6-201ENST00000263073 PLA2G4DQ86XP0 818 aa13.09□□□□□ -0.31
SMG6-201ENST00000263073 POLD4Q9HCU8 107 aa13.09□□□□□ -0.31
SMG6-201ENST00000263073 GGT7Q9UJ14 662 aa13.09□□□□□ -0.31
SMG6-201ENST00000263073 FNDC3AQ9Y2H6 1198 aaKnown RBP13.09□□□□□ -0.31
SMG6-201ENST00000263073 CC2D1AQ6P1N0 951 aaPredicted RBP13.09□□□□□ -0.31
SMG6-201ENST00000263073 NLRP7Q8WX94 980 aa13.09□□□□□ -0.31
SMG6-201ENST00000263073 COA7Q96BR5 231 aa13.09□□□□□ -0.31
SMG6-201ENST00000263073 MLXIPQ9HAP2 919 aa13.09□□□□□ -0.31
SMG6-201ENST00000263073 UBE2TQ9NPD8 197 aaPredicted RBP13.09□□□□□ -0.31
SMG6-201ENST00000263073 CCDC87Q9NVE4 849 aa13.09□□□□□ -0.31
SMG6-201ENST00000263073 GCNT4Q9P109 453 aa13.09□□□□□ -0.31
SMG6-201ENST00000263073 AFPP02771 609 aaKnown RBP13.09□□□□□ -0.31
SMG6-201ENST00000263073 KITP10721 976 aa13.09□□□□□ -0.31
SMG6-201ENST00000263073 TCIRG1Q13488 830 aa13.09□□□□□ -0.31
SMG6-201ENST00000263073 KRT31Q15323 416 aa13.09□□□□□ -0.31
SMG6-201ENST00000263073 ZC3H18Q86VM9 953 aaKnown RBP13.09□□□□□ -0.31
SMG6-201ENST00000263073 PAGR1Q9BTK6 254 aa13.09□□□□□ -0.31
SMG6-201ENST00000263073 APOL6Q9BWW8 343 aa13.09□□□□□ -0.31
SMG6-201ENST00000263073 TRPC6Q9Y210 931 aa13.09□□□□□ -0.31
SMG6-201ENST00000263073 MYO1FO00160 1098 aa13.09□□□□□ -0.31
SMG6-201ENST00000263073 BTDP43251 543 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms