RNA–Protein interactions for RNA: ENST00000262018.7

SGCA-201, Transcript of sarcoglycan alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SGCA, Length 1,432 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCA-201ENST00000262018 TET1Q8NFU7 2136 aa15.44■□□□□ 0.06
SGCA-201ENST00000262018 LINC01553A4QN01 128 aa15.44■□□□□ 0.06
SGCA-201ENST00000262018 E7EWF7 191 aa15.44■□□□□ 0.06
SGCA-201ENST00000262018 DEFB103AP81534 67 aa15.44■□□□□ 0.06
SGCA-201ENST00000262018 BFSP2Q13515 415 aa15.44■□□□□ 0.06
SGCA-201ENST00000262018 COL9A3Q14050 684 aaPredicted RBP15.44■□□□□ 0.06
SGCA-201ENST00000262018 NFKBIBQ15653 356 aa15.44■□□□□ 0.06
SGCA-201ENST00000262018 NBPF20Q3BBV1 942 aa15.44■□□□□ 0.06
SGCA-201ENST00000262018 RAD9AQ99638 391 aa15.44■□□□□ 0.06
SGCA-201ENST00000262018 A1CFQ9NQ94 594 aaKnown RBP15.44■□□□□ 0.06
SGCA-201ENST00000262018 GPHNQ9NQX3 736 aaPredicted RBP15.44■□□□□ 0.06
SGCA-201ENST00000262018 SH2B1Q9NRF2 756 aaPredicted RBP15.44■□□□□ 0.06
SGCA-201ENST00000262018 ARPP21Q9UBL0 812 aaPredicted RBP15.44■□□□□ 0.06
SGCA-201ENST00000262018 PRKAG3Q9UGI9 489 aa15.44■□□□□ 0.06
SGCA-201ENST00000262018 TDO2P48775 406 aa15.43■□□□□ 0.06
SGCA-201ENST00000262018 OAZ1P54368 228 aa15.43■□□□□ 0.06
SGCA-201ENST00000262018 PURAQ00577 322 aaKnown RBP15.43■□□□□ 0.06
SGCA-201ENST00000262018 IFNL3Q8IZI9 196 aa15.43■□□□□ 0.06
SGCA-201ENST00000262018 MTG1Q9BT17 334 aaPredicted RBP15.43■□□□□ 0.06
SGCA-201ENST00000262018 EPB41L4AQ9HCS5 686 aaPredicted RBP15.43■□□□□ 0.06
SGCA-201ENST00000262018 NOD1Q9Y239 953 aa15.43■□□□□ 0.06
SGCA-201ENST00000262018 PTPRSQ13332 1948 aa15.43■□□□□ 0.06
SGCA-201ENST00000262018 BAZ2AQ9UIF9 1905 aaKnown RBP15.43■□□□□ 0.06
SGCA-201ENST00000262018 C19orf67A6NJJ6 358 aa15.43■□□□□ 0.06
SGCA-201ENST00000262018 GFRA3O60609 400 aa15.43■□□□□ 0.06
SGCA-201ENST00000262018 IRS1P35568 1242 aa15.43■□□□□ 0.06
SGCA-201ENST00000262018 TOB2Q14106 344 aaPredicted RBP15.43■□□□□ 0.06
SGCA-201ENST00000262018 SBK1Q52WX2 424 aa15.43■□□□□ 0.06
SGCA-201ENST00000262018 IER5LQ5T953 404 aa15.43■□□□□ 0.06
SGCA-201ENST00000262018 FAM117BQ6P1L5 589 aa15.43■□□□□ 0.06
SGCA-201ENST00000262018 DHX32Q7L7V1 743 aaKnown RBP15.43■□□□□ 0.06
SGCA-201ENST00000262018 ADHFE1Q8IWW8 467 aa15.43■□□□□ 0.06
SGCA-201ENST00000262018 FBXO22Q8NEZ5 403 aa15.43■□□□□ 0.06
SGCA-201ENST00000262018 NAPBQ9H115 298 aa15.43■□□□□ 0.06
SGCA-201ENST00000262018 RNF146Q9NTX7 359 aa15.43■□□□□ 0.06
SGCA-201ENST00000262018 NYAP2Q9P242 653 aa15.43■□□□□ 0.06
SGCA-201ENST00000262018 FEM1BQ9UK73 627 aa15.43■□□□□ 0.06
SGCA-201ENST00000262018 TANC1Q9C0D5 1861 aa15.42■□□□□ 0.06
SGCA-201ENST00000262018 ZNF213O14771 459 aa15.42■□□□□ 0.06
SGCA-201ENST00000262018 GJB5O95377 273 aa15.42■□□□□ 0.06
SGCA-201ENST00000262018 NUCB2P80303 420 aa15.42■□□□□ 0.06
SGCA-201ENST00000262018 EXOSC10Q01780 885 aaKnown RBP15.42■□□□□ 0.06
SGCA-201ENST00000262018 DUSP28Q4G0W2 176 aa15.42■□□□□ 0.06
SGCA-201ENST00000262018 CTR9Q6PD62 1173 aa15.42■□□□□ 0.06
SGCA-201ENST00000262018 C17orf80Q9BSJ5 609 aa15.42■□□□□ 0.06
SGCA-201ENST00000262018 VTA1Q9NP79 307 aa15.42■□□□□ 0.06
SGCA-201ENST00000262018 CLIP2Q9UDT6 1046 aa15.42■□□□□ 0.06
SGCA-201ENST00000262018 MUTYHQ9UIF7 546 aa15.42■□□□□ 0.06
SGCA-201ENST00000262018 LARGE1O95461 756 aa15.41■□□□□ 0.06
SGCA-201ENST00000262018 CPT1AP50416 773 aa15.41■□□□□ 0.06
SGCA-201ENST00000262018 STK11IPQ8N1F8 1099 aa15.41■□□□□ 0.06
SGCA-201ENST00000262018 MRPL38Q96DV4 380 aaKnown RBP15.41■□□□□ 0.06
SGCA-201ENST00000262018 AGXT2Q9BYV1 514 aa15.41■□□□□ 0.06
SGCA-201ENST00000262018 TPCN1Q9ULQ1 816 aa15.41■□□□□ 0.06
SGCA-201ENST00000262018 ISY1Q9ULR0 285 aaKnown RBP15.41■□□□□ 0.06
SGCA-201ENST00000262018 CHMP4BP1P59074 171 aa15.4■□□□□ 0.06
SGCA-201ENST00000262018 HAND2P61296 217 aa15.4■□□□□ 0.06
SGCA-201ENST00000262018 NBR1Q14596 966 aa15.4■□□□□ 0.06
SGCA-201ENST00000262018 ME3Q16798 604 aa15.4■□□□□ 0.06
SGCA-201ENST00000262018 PTPROQ16827 1216 aa15.4■□□□□ 0.06
SGCA-201ENST00000262018 NFRKBQ6P4R8 1299 aa15.4■□□□□ 0.06
SGCA-201ENST00000262018 CNKSR3Q6P9H4 555 aa15.4■□□□□ 0.06
SGCA-201ENST00000262018 Q6ZUG5 572 aa15.4■□□□□ 0.06
SGCA-201ENST00000262018 FBXL16Q8N461 479 aa15.4■□□□□ 0.06
SGCA-201ENST00000262018 OR6J1Q8NGC5 347 aa15.4■□□□□ 0.06
SGCA-201ENST00000262018 PABPC5Q96DU9 382 aaKnown RBP15.4■□□□□ 0.06
SGCA-201ENST00000262018 TCEANC2Q96MN5 208 aa15.4■□□□□ 0.06
SGCA-201ENST00000262018 LARP6Q9BRS8 491 aaKnown RBP15.4■□□□□ 0.06
SGCA-201ENST00000262018 WDR11Q9BZH6 1224 aa15.4■□□□□ 0.06
SGCA-201ENST00000262018 FAM86C1Q9NVL1 165 aa15.4■□□□□ 0.06
SGCA-201ENST00000262018 ZFHX2Q9C0A1 2572 aaPredicted RBP15.4■□□□□ 0.06
SGCA-201ENST00000262018 WDR19Q8NEZ3 1342 aa15.39■□□□□ 0.05
SGCA-201ENST00000262018 SIP14410 1827 aa15.39■□□□□ 0.05
SGCA-201ENST00000262018 ALAS1P13196 640 aa15.39■□□□□ 0.05
SGCA-201ENST00000262018 TCF15Q12870 199 aa15.39■□□□□ 0.05
SGCA-201ENST00000262018 GPNMBQ14956 572 aa15.39■□□□□ 0.05
SGCA-201ENST00000262018 TIGD5Q53EQ6 642 aa15.39■□□□□ 0.05
SGCA-201ENST00000262018 HERC4Q5GLZ8 1057 aaPredicted RBP15.39■□□□□ 0.05
SGCA-201ENST00000262018 TCEAL5Q5H9L2 206 aa15.39■□□□□ 0.05
SGCA-201ENST00000262018 MB21D2Q8IYB1 491 aaPredicted RBP15.39■□□□□ 0.05
SGCA-201ENST00000262018 CCDC155Q8N6L0 562 aa15.39■□□□□ 0.05
SGCA-201ENST00000262018 BANK1Q8NDB2 785 aa15.39■□□□□ 0.05
SGCA-201ENST00000262018 AFAP1L1Q8TED9 768 aa15.39■□□□□ 0.05
SGCA-201ENST00000262018 TRERF1Q96PN7 1200 aa15.39■□□□□ 0.05
SGCA-201ENST00000262018 PRRX2Q99811 253 aa15.39■□□□□ 0.05
SGCA-201ENST00000262018 ZSCAN21Q9Y5A6 473 aaPredicted RBP15.39■□□□□ 0.05
SGCA-201ENST00000262018 TECTAO75443 2155 aa15.38■□□□□ 0.05
SGCA-201ENST00000262018 MINDY4BA8MYZ0 360 aa15.38■□□□□ 0.05
SGCA-201ENST00000262018 FDX1P10109 184 aa15.38■□□□□ 0.05
SGCA-201ENST00000262018 RASA1P20936 1047 aa15.38■□□□□ 0.05
SGCA-201ENST00000262018 PTPN11Q06124 597 aaPredicted RBP15.38■□□□□ 0.05
SGCA-201ENST00000262018 ST3GAL1Q11201 340 aa15.38■□□□□ 0.05
SGCA-201ENST00000262018 TCTN1Q2MV58 587 aa15.38■□□□□ 0.05
SGCA-201ENST00000262018 TKFCQ3LXA3 575 aa15.38■□□□□ 0.05
SGCA-201ENST00000262018 BRDTQ58F21 947 aaPredicted RBP15.38■□□□□ 0.05
SGCA-201ENST00000262018 TBC1D10CQ8IV04 446 aa15.38■□□□□ 0.05
SGCA-201ENST00000262018 NCOA7Q8NI08 942 aa15.38■□□□□ 0.05
SGCA-201ENST00000262018 PBXIP1Q96AQ6 731 aa15.38■□□□□ 0.05
SGCA-201ENST00000262018 PURBQ96QR8 312 aaKnown RBP15.38■□□□□ 0.05
SGCA-201ENST00000262018 MKNK2Q9HBH9 465 aa15.38■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms