RNA–Protein interactions for RNA: ENST00000261584.8

PALB2-201, Transcript of partner and localizer of BRCA2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PALB2, Length 4,003 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-201ENST00000261584 CELF4Q9BZC1 486 aaKnown RBP11.12□□□□□ -0.63
PALB2-201ENST00000261584 PANK4Q9NVE7 773 aa11.12□□□□□ -0.63
PALB2-201ENST00000261584 CTTNBP2NLQ9P2B4 639 aa11.12□□□□□ -0.63
PALB2-201ENST00000261584 FAM153AQ9UHL3 310 aa11.12□□□□□ -0.63
PALB2-201ENST00000261584 FAM205AQ6ZU69 1335 aa11.11□□□□□ -0.63
PALB2-201ENST00000261584 ERVV-2B6SEH9 535 aa11.11□□□□□ -0.63
PALB2-201ENST00000261584 SESN3P58005 492 aa11.11□□□□□ -0.63
PALB2-201ENST00000261584 TBX2Q13207 712 aaPredicted RBP11.11□□□□□ -0.63
PALB2-201ENST00000261584 MMS22LQ6ZRQ5 1243 aa11.11□□□□□ -0.63
PALB2-201ENST00000261584 RNPC3Q96LT9 517 aaKnown RBP11.11□□□□□ -0.63
PALB2-201ENST00000261584 PACSIN1Q9BY11 444 aa11.11□□□□□ -0.63
PALB2-201ENST00000261584 PCDHA4Q9UN74 947 aa11.11□□□□□ -0.63
PALB2-201ENST00000261584 DLG5Q8TDM6 1919 aa11.11□□□□□ -0.63
PALB2-201ENST00000261584 A0A1W2PRG0 241 aa11.11□□□□□ -0.63
PALB2-201ENST00000261584 CETN3O15182 167 aa11.11□□□□□ -0.63
PALB2-201ENST00000261584 SKAP2O75563 359 aaPredicted RBP11.11□□□□□ -0.63
PALB2-201ENST00000261584 PRPF6O94906 941 aaKnown RBP11.11□□□□□ -0.63
PALB2-201ENST00000261584 LONP1P36776 959 aaKnown RBP11.11□□□□□ -0.63
PALB2-201ENST00000261584 STAT3P40763 770 aa11.11□□□□□ -0.63
PALB2-201ENST00000261584 GNAQP50148 359 aa11.11□□□□□ -0.63
PALB2-201ENST00000261584 EPHB4P54760 987 aa11.11□□□□□ -0.63
PALB2-201ENST00000261584 RPS8P62241 208 aaKnown RBP11.11□□□□□ -0.63
PALB2-201ENST00000261584 TUBB2AQ13885 445 aa11.11□□□□□ -0.63
PALB2-201ENST00000261584 FAM26FQ5R3K3 315 aa11.11□□□□□ -0.63
PALB2-201ENST00000261584 LARP4BQ92615 738 aaKnown RBP11.11□□□□□ -0.63
PALB2-201ENST00000261584 TUBB2BQ9BVA1 445 aa11.11□□□□□ -0.63
PALB2-201ENST00000261584 DIP2CQ9Y2E4 1556 aa11.11□□□□□ -0.63
PALB2-201ENST00000261584 SLURP2P0DP57 97 aa11.11□□□□□ -0.63
PALB2-201ENST00000261584 EEF1GP26641 437 aaKnown RBP11.11□□□□□ -0.63
PALB2-201ENST00000261584 ARHGAP25P42331 645 aa11.11□□□□□ -0.63
PALB2-201ENST00000261584 CCDC84Q86UT8 332 aaPredicted RBP11.11□□□□□ -0.63
PALB2-201ENST00000261584 TSEN2Q8NCE0 465 aaKnown RBP11.11□□□□□ -0.63
PALB2-201ENST00000261584 BANK1Q8NDB2 785 aa11.11□□□□□ -0.63
PALB2-201ENST00000261584 GDAP1Q8TB36 358 aa11.11□□□□□ -0.63
PALB2-201ENST00000261584 DDX12PQ92771 950 aa11.11□□□□□ -0.63
PALB2-201ENST00000261584 PPP1R12CQ9BZL4 782 aa11.11□□□□□ -0.63
PALB2-201ENST00000261584 PCDHA12Q9UN75 941 aa11.11□□□□□ -0.63
PALB2-201ENST00000261584 MYO5BQ9ULV0 1848 aa11.1□□□□□ -0.63
PALB2-201ENST00000261584 GOLGA8KD6RF30 607 aa11.1□□□□□ -0.63
PALB2-201ENST00000261584 EPHB6O15197 1021 aa11.1□□□□□ -0.63
PALB2-201ENST00000261584 EEF2P13639 858 aaKnown RBP11.1□□□□□ -0.63
PALB2-201ENST00000261584 NR2F2P24468 414 aa11.1□□□□□ -0.63
PALB2-201ENST00000261584 MAGOHP61326 146 aaKnown RBP11.1□□□□□ -0.63
PALB2-201ENST00000261584 MDM2Q00987 491 aaPredicted RBP11.1□□□□□ -0.63
PALB2-201ENST00000261584 PPP2R5AQ15172 486 aa11.1□□□□□ -0.63
PALB2-201ENST00000261584 EAPPQ56P03 285 aaPredicted RBP11.1□□□□□ -0.63
PALB2-201ENST00000261584 ZNF746Q6NUN9 644 aaPredicted RBP11.1□□□□□ -0.63
PALB2-201ENST00000261584 KLHL34Q8N239 644 aa11.1□□□□□ -0.63
PALB2-201ENST00000261584 KCNV2Q8TDN2 545 aa11.1□□□□□ -0.63
PALB2-201ENST00000261584 SH3RF3Q8TEJ3 882 aaPredicted RBP11.1□□□□□ -0.63
PALB2-201ENST00000261584 MAGOHBQ96A72 148 aaKnown RBP11.1□□□□□ -0.63
PALB2-201ENST00000261584 CCDC87Q9NVE4 849 aa11.1□□□□□ -0.63
PALB2-201ENST00000261584 SNX24Q9Y343 169 aa11.1□□□□□ -0.63
PALB2-201ENST00000261584 CTDP1Q9Y5B0 961 aaPredicted RBP11.1□□□□□ -0.63
PALB2-201ENST00000261584 TACC3Q9Y6A5 838 aa11.1□□□□□ -0.63
PALB2-201ENST00000261584 USP17L15C9J2P7 530 aa11.1□□□□□ -0.63
PALB2-201ENST00000261584 USP17L13C9JLJ4 530 aa11.1□□□□□ -0.63
PALB2-201ENST00000261584 USP17L11C9JVI0 530 aa11.1□□□□□ -0.63
PALB2-201ENST00000261584 USP17L18D6R9N7 530 aa11.1□□□□□ -0.63
PALB2-201ENST00000261584 USP17L22D6RA61 530 aa11.1□□□□□ -0.63
PALB2-201ENST00000261584 USP17L17D6RBQ6 530 aa11.1□□□□□ -0.63
PALB2-201ENST00000261584 USP17L19D6RCP7 530 aa11.1□□□□□ -0.63
PALB2-201ENST00000261584 USP17L20D6RJB6 530 aa11.1□□□□□ -0.63
PALB2-201ENST00000261584 DAPK3O43293 454 aa11.1□□□□□ -0.63
PALB2-201ENST00000261584 SPOPO43791 374 aa11.1□□□□□ -0.63
PALB2-201ENST00000261584 UFL1O94874 794 aa11.1□□□□□ -0.63
PALB2-201ENST00000261584 ATP2C1P98194 919 aaPredicted RBP11.1□□□□□ -0.63
PALB2-201ENST00000261584 PLCB3Q01970 1234 aa11.1□□□□□ -0.63
PALB2-201ENST00000261584 USP17L24Q0WX57 530 aa11.1□□□□□ -0.63
PALB2-201ENST00000261584 VWA3BQ502W6 1294 aa11.1□□□□□ -0.63
PALB2-201ENST00000261584 USP17L6PQ6QN14 398 aa11.1□□□□□ -0.63
PALB2-201ENST00000261584 TPH2Q8IWU9 490 aa11.1□□□□□ -0.63
PALB2-201ENST00000261584 CCDC105Q8IYK2 499 aa11.1□□□□□ -0.63
PALB2-201ENST00000261584 CACNA2D3Q8IZS8 1091 aa11.1□□□□□ -0.63
PALB2-201ENST00000261584 SPDYE3A6NKU9 549 aa11.1□□□□□ -0.63
PALB2-201ENST00000261584 KCNJ6P48051 423 aa11.1□□□□□ -0.63
PALB2-201ENST00000261584 MCTP2Q6DN12 878 aa11.1□□□□□ -0.63
PALB2-201ENST00000261584 DPP8Q6V1X1 898 aaPredicted RBP11.1□□□□□ -0.63
PALB2-201ENST00000261584 ELAC2Q9BQ52 826 aaKnown RBP11.1□□□□□ -0.63
PALB2-201ENST00000261584 PHF20Q9BVI0 1012 aa11.1□□□□□ -0.63
PALB2-201ENST00000261584 DCP1AQ9NPI6 582 aaPredicted RBP11.1□□□□□ -0.63
PALB2-201ENST00000261584 SAMD15Q9P1V8 674 aa11.1□□□□□ -0.63
PALB2-201ENST00000261584 SNX12Q9UMY4 172 aa11.1□□□□□ -0.63
PALB2-201ENST00000261584 TAL1P17542 331 aaPredicted RBP11.09□□□□□ -0.63
PALB2-201ENST00000261584 HNRNPH1P31943 449 aaKnown RBP11.09□□□□□ -0.63
PALB2-201ENST00000261584 UAP1Q16222 522 aaPredicted RBP11.09□□□□□ -0.63
PALB2-201ENST00000261584 ADSSL1Q8N142 457 aa11.09□□□□□ -0.63
PALB2-201ENST00000261584 ARFGAP2Q8N6H7 521 aa11.09□□□□□ -0.63
PALB2-201ENST00000261584 ELMO3Q96BJ8 720 aa11.09□□□□□ -0.63
PALB2-201ENST00000261584 IL17RAQ96F46 866 aa11.09□□□□□ -0.63
PALB2-201ENST00000261584 DIP2BQ9P265 1576 aa11.09□□□□□ -0.63
PALB2-201ENST00000261584 ODF2LQ9ULJ1 636 aa11.09□□□□□ -0.63
PALB2-201ENST00000261584 USTQ9Y2C2 406 aa11.09□□□□□ -0.63
PALB2-201ENST00000261584 UTP11Q9Y3A2 253 aaKnown RBP11.09□□□□□ -0.63
PALB2-201ENST00000261584 KIF13AQ9H1H9 1805 aa11.09□□□□□ -0.63
PALB2-201ENST00000261584 GLI1P08151 1106 aa11.09□□□□□ -0.63
PALB2-201ENST00000261584 NKX1-1Q15270 411 aaPredicted RBP11.09□□□□□ -0.63
PALB2-201ENST00000261584 MUM1L1Q5H9M0 696 aa11.09□□□□□ -0.63
PALB2-201ENST00000261584 GJB7Q6PEY0 223 aa11.09□□□□□ -0.63
PALB2-201ENST00000261584 CCDC65Q8IXS2 484 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms