RNA–Protein interactions for RNA: ENST00000257189.4

DSG3-201, Transcript of desmoglein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DSG3, Length 5,525 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DSG3-201ENST00000257189 GRAMD1AQ96CP6 724 aa8.88□□□□□ -0.99
DSG3-201ENST00000257189 THUMPD2Q9BTF0 503 aaKnown RBP8.88□□□□□ -0.99
DSG3-201ENST00000257189 SEPT3Q9UH03 358 aa8.88□□□□□ -0.99
DSG3-201ENST00000257189 DNM3Q9UQ16 869 aa8.88□□□□□ -0.99
DSG3-201ENST00000257189 ARAP3Q8WWN8 1544 aa8.88□□□□□ -0.99
DSG3-201ENST00000257189 ZCCHC11Q5TAX3 1644 aaKnown RBP8.88□□□□□ -0.99
DSG3-201ENST00000257189 PGRMC1O00264 195 aaKnown RBP8.88□□□□□ -0.99
DSG3-201ENST00000257189 CELF2O95319 508 aaKnown RBP8.88□□□□□ -0.99
DSG3-201ENST00000257189 ALDH1A1P00352 501 aa8.88□□□□□ -0.99
DSG3-201ENST00000257189 FBXL13Q8NEE6 735 aa8.88□□□□□ -0.99
DSG3-201ENST00000257189 FAM212AQ96EL1 285 aa8.88□□□□□ -0.99
DSG3-201ENST00000257189 TRIM55Q9BYV6 548 aa8.88□□□□□ -0.99
DSG3-201ENST00000257189 ABCC1P33527 1531 aa8.88□□□□□ -0.99
DSG3-201ENST00000257189 TFRCP02786 760 aaKnown RBP8.87□□□□□ -0.99
DSG3-201ENST00000257189 SERPINB4P48594 390 aa8.87□□□□□ -0.99
DSG3-201ENST00000257189 PRPSAP1Q14558 356 aa8.87□□□□□ -0.99
DSG3-201ENST00000257189 AOC3Q16853 763 aa8.87□□□□□ -0.99
DSG3-201ENST00000257189 UBE3BQ7Z3V4 1068 aa8.87□□□□□ -0.99
DSG3-201ENST00000257189 PARP9Q8IXQ6 854 aa8.87□□□□□ -0.99
DSG3-201ENST00000257189 ANGEL1Q9UNK9 670 aaKnown RBP8.87□□□□□ -0.99
DSG3-201ENST00000257189 USTQ9Y2C2 406 aa8.87□□□□□ -0.99
DSG3-201ENST00000257189 EXOC3O60645 756 aa8.87□□□□□ -0.99
DSG3-201ENST00000257189 XRCC5P13010 732 aaKnown RBP8.87□□□□□ -0.99
DSG3-201ENST00000257189 IFNA8P32881 189 aa8.87□□□□□ -0.99
DSG3-201ENST00000257189 MSH2P43246 934 aa8.87□□□□□ -0.99
DSG3-201ENST00000257189 AP1B1Q10567 949 aa8.87□□□□□ -0.99
DSG3-201ENST00000257189 MORC3Q14149 939 aa8.87□□□□□ -0.99
DSG3-201ENST00000257189 CEP85Q6P2H3 762 aa8.87□□□□□ -0.99
DSG3-201ENST00000257189 KSR2Q6VAB6 950 aa8.87□□□□□ -0.99
DSG3-201ENST00000257189 UPF1Q92900 1129 aaKnown RBP eCLIP8.87□□□□□ -0.99
DSG3-201ENST00000257189 TCEANC2Q96MN5 208 aa8.87□□□□□ -0.99
DSG3-201ENST00000257189 LSM14BQ9BX40 385 aaKnown RBP8.87□□□□□ -0.99
DSG3-201ENST00000257189 SLC24A3Q9HC58 644 aa8.87□□□□□ -0.99
DSG3-201ENST00000257189 FRMD4AQ9P2Q2 1039 aaPredicted RBP8.87□□□□□ -0.99
DSG3-201ENST00000257189 STXBP3O00186 592 aa8.87□□□□□ -0.99
DSG3-201ENST00000257189 CMA1P23946 247 aa8.87□□□□□ -0.99
DSG3-201ENST00000257189 NSFP46459 744 aaKnown RBP8.87□□□□□ -0.99
DSG3-201ENST00000257189 CTCFP49711 727 aaPredicted RBP8.87□□□□□ -0.99
DSG3-201ENST00000257189 STAT2P52630 851 aa8.87□□□□□ -0.99
DSG3-201ENST00000257189 KRT39Q6A163 491 aa8.87□□□□□ -0.99
DSG3-201ENST00000257189 ILDR2Q71H61 639 aa8.87□□□□□ -0.99
DSG3-201ENST00000257189 DDX42Q86XP3 938 aaKnown RBP eCLIP8.87□□□□□ -0.99
DSG3-201ENST00000257189 TEX2Q8IWB9 1127 aa8.87□□□□□ -0.99
DSG3-201ENST00000257189 DIS3L2Q8IYB7 885 aaKnown RBP8.87□□□□□ -0.99
DSG3-201ENST00000257189 MTBPQ96DY7 904 aa8.87□□□□□ -0.99
DSG3-201ENST00000257189 CHAMP1Q96JM3 812 aa8.87□□□□□ -0.99
DSG3-201ENST00000257189 DPH5Q9H2P9 285 aa8.87□□□□□ -0.99
DSG3-201ENST00000257189 PRDM5Q9NQX1 630 aaPredicted RBP8.87□□□□□ -0.99
DSG3-201ENST00000257189 SPTLC3Q9NUV7 552 aa8.87□□□□□ -0.99
DSG3-201ENST00000257189 SUFUQ9UMX1 484 aa8.87□□□□□ -0.99
DSG3-201ENST00000257189 TCOF1Q13428 1488 aaKnown RBP8.87□□□□□ -0.99
DSG3-201ENST00000257189 TARBP1Q13395 1621 aaKnown RBP8.87□□□□□ -0.99
DSG3-201ENST00000257189 SYCE1LA8MT33 242 aa8.87□□□□□ -0.99
DSG3-201ENST00000257189 TLR3O15455 904 aaKnown RBP8.87□□□□□ -0.99
DSG3-201ENST00000257189 HEXIM1O94992 359 aaKnown RBP8.87□□□□□ -0.99
DSG3-201ENST00000257189 CYLC2Q14093 348 aaPredicted RBP8.87□□□□□ -0.99
DSG3-201ENST00000257189 KRT81Q14533 505 aa8.87□□□□□ -0.99
DSG3-201ENST00000257189 CASP8Q14790 479 aa8.87□□□□□ -0.99
DSG3-201ENST00000257189 APOBEC3FQ8IUX4 373 aaKnown RBP8.87□□□□□ -0.99
DSG3-201ENST00000257189 MEIS3Q99687 375 aa8.87□□□□□ -0.99
DSG3-201ENST00000257189 ZBTB40Q9NUA8 1239 aa8.87□□□□□ -0.99
DSG3-201ENST00000257189 DDX28Q9NUL7 540 aaKnown RBP8.87□□□□□ -0.99
DSG3-201ENST00000257189 TMEM63CQ9P1W3 806 aa8.87□□□□□ -0.99
DSG3-201ENST00000257189 LRWD1Q9UFC0 647 aa8.87□□□□□ -0.99
DSG3-201ENST00000257189 LCMT1Q9UIC8 334 aa8.87□□□□□ -0.99
DSG3-201ENST00000257189 SOS2Q07890 1332 aaPredicted RBP8.86□□□□□ -0.99
DSG3-201ENST00000257189 A0A1W2PQ27 194 aa8.86□□□□□ -0.99
DSG3-201ENST00000257189 A0A1W2PQ64 194 aa8.86□□□□□ -0.99
DSG3-201ENST00000257189 A0A1W2PQD8 194 aa8.86□□□□□ -0.99
DSG3-201ENST00000257189 ZBBXA8MT70 800 aa8.86□□□□□ -0.99
DSG3-201ENST00000257189 GTPBP6O43824 516 aaPredicted RBP8.86□□□□□ -0.99
DSG3-201ENST00000257189 C4BPBP20851 252 aa8.86□□□□□ -0.99
DSG3-201ENST00000257189 KRR1Q13601 381 aaKnown RBP8.86□□□□□ -0.99
DSG3-201ENST00000257189 ARHGAP44Q17R89 818 aa8.86□□□□□ -0.99
DSG3-201ENST00000257189 HERC4Q5GLZ8 1057 aaPredicted RBP8.86□□□□□ -0.99
DSG3-201ENST00000257189 MFSD14CQ5VZR4 134 aa8.86□□□□□ -0.99
DSG3-201ENST00000257189 FHDC1Q9C0D6 1143 aaPredicted RBP8.86□□□□□ -0.99
DSG3-201ENST00000257189 CUEDC2Q9H467 287 aa8.86□□□□□ -0.99
DSG3-201ENST00000257189 STK17AQ9UEE5 414 aa8.86□□□□□ -0.99
DSG3-201ENST00000257189 INSRP06213 1382 aa8.86□□□□□ -0.99
DSG3-201ENST00000257189 IQANK1A0A1B0GTG1 560 aa8.86□□□□□ -0.99
DSG3-201ENST00000257189 GTPBP10A4D1E9 387 aaKnown RBP8.86□□□□□ -0.99
DSG3-201ENST00000257189 CCDC188H7C350 402 aa8.86□□□□□ -0.99
DSG3-201ENST00000257189 NR1I2O75469 434 aa8.86□□□□□ -0.99
DSG3-201ENST00000257189 STAM2O75886 525 aa8.86□□□□□ -0.99
DSG3-201ENST00000257189 MT-ND3P03897 115 aa8.86□□□□□ -0.99
DSG3-201ENST00000257189 PNMA6AP0CW24 399 aaPredicted RBP8.86□□□□□ -0.99
DSG3-201ENST00000257189 DEFA1P59665 94 aa8.86□□□□□ -0.99
DSG3-201ENST00000257189 DEFA3P59666 94 aa8.86□□□□□ -0.99
DSG3-201ENST00000257189 PDE1BQ01064 536 aa8.86□□□□□ -0.99
DSG3-201ENST00000257189 LETM2Q2VYF4 491 aa8.86□□□□□ -0.99
DSG3-201ENST00000257189 LINS1Q8NG48 757 aa8.86□□□□□ -0.99
DSG3-201ENST00000257189 RIOK1Q9BRS2 568 aaKnown RBP8.86□□□□□ -0.99
DSG3-201ENST00000257189 DISP1Q96F81 1524 aa8.86□□□□□ -0.99
DSG3-201ENST00000257189 ECEL1O95672 775 aa8.86□□□□□ -0.99
DSG3-201ENST00000257189 CLCN6P51797 869 aa8.86□□□□□ -0.99
DSG3-201ENST00000257189 HORMAD1Q86X24 394 aa8.86□□□□□ -0.99
DSG3-201ENST00000257189 TRIM50Q86XT4 487 aa8.86□□□□□ -0.99
DSG3-201ENST00000257189 SLC17A8Q8NDX2 589 aa8.86□□□□□ -0.99
DSG3-201ENST00000257189 PSMB7Q99436 277 aa8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms