RNA–Protein interactions for RNA: ENST00000254816.5

TRIM47-201, Transcript of tripartite motif containing 47, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM47, Length 2,266 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-201ENST00000254816 IREB2P48200 963 aaKnown RBP21.25■□□□□ 0.99
TRIM47-201ENST00000254816 ZNF75DP51815 510 aa21.25■□□□□ 0.99
TRIM47-201ENST00000254816 DHX8Q14562 1220 aaKnown RBP21.25■□□□□ 0.99
TRIM47-201ENST00000254816 DNTTIP2Q5QJE6 756 aaKnown RBP21.25■□□□□ 0.99
TRIM47-201ENST00000254816 SMYD4Q8IYR2 804 aaPredicted RBP21.25■□□□□ 0.99
TRIM47-201ENST00000254816 TRIML1Q8N9V2 468 aa21.25■□□□□ 0.99
TRIM47-201ENST00000254816 GOLGA6L6A8MZA4 724 aa21.24■□□□□ 0.99
TRIM47-201ENST00000254816 POTEIP0CG38 1075 aa21.24■□□□□ 0.99
TRIM47-201ENST00000254816 POTEJP0CG39 1038 aa21.24■□□□□ 0.99
TRIM47-201ENST00000254816 CIITAP33076 1130 aa21.24■□□□□ 0.99
TRIM47-201ENST00000254816 HSD17B4P51659 736 aa21.24■□□□□ 0.99
TRIM47-201ENST00000254816 CATSPERGQ6ZRH7 1159 aa21.24■□□□□ 0.99
TRIM47-201ENST00000254816 DRC7Q8IY82 874 aa21.24■□□□□ 0.99
TRIM47-201ENST00000254816 GSDMAQ96QA5 445 aa21.24■□□□□ 0.99
TRIM47-201ENST00000254816 RIPK3Q9Y572 518 aa21.24■□□□□ 0.99
TRIM47-201ENST00000254816 ZC3H4Q9UPT8 1303 aaKnown RBP21.24■□□□□ 0.99
TRIM47-201ENST00000254816 DSG3P32926 999 aa21.24■□□□□ 0.99
TRIM47-201ENST00000254816 ECM1Q16610 540 aa21.24■□□□□ 0.99
TRIM47-201ENST00000254816 KRT79Q5XKE5 535 aa21.24■□□□□ 0.99
TRIM47-201ENST00000254816 PLA2G4DQ86XP0 818 aa21.24■□□□□ 0.99
TRIM47-201ENST00000254816 KBTBD4Q9NVX7 518 aa21.24■□□□□ 0.99
TRIM47-201ENST00000254816 NRBP1Q9UHY1 535 aa21.24■□□□□ 0.99
TRIM47-201ENST00000254816 MSH4O15457 936 aa21.23■□□□□ 0.99
TRIM47-201ENST00000254816 NF2P35240 595 aa21.23■□□□□ 0.99
TRIM47-201ENST00000254816 COG2Q14746 738 aa21.23■□□□□ 0.99
TRIM47-201ENST00000254816 SLC30A10Q6XR72 485 aa21.23■□□□□ 0.99
TRIM47-201ENST00000254816 TRERF1Q96PN7 1200 aa21.23■□□□□ 0.99
TRIM47-201ENST00000254816 IGLV3-22A0A075B6J6 115 aa21.22■□□□□ 0.99
TRIM47-201ENST00000254816 RPN1P04843 607 aaKnown RBP21.22■□□□□ 0.99
TRIM47-201ENST00000254816 CD44P16070 742 aaKnown RBP21.22■□□□□ 0.99
TRIM47-201ENST00000254816 FMR1Q06787 632 aaKnown RBP eCLIP21.22■□□□□ 0.99
TRIM47-201ENST00000254816 SH3D19Q5HYK7 790 aa21.22■□□□□ 0.99
TRIM47-201ENST00000254816 TREML2Q5T2D2 321 aa21.22■□□□□ 0.99
TRIM47-201ENST00000254816 SLFN12Q8IYM2 578 aa21.22■□□□□ 0.99
TRIM47-201ENST00000254816 REPS2Q8NFH8 660 aa21.22■□□□□ 0.99
TRIM47-201ENST00000254816 OTUD5Q96G74 571 aa21.22■□□□□ 0.99
TRIM47-201ENST00000254816 CDK5RAP3Q96JB5 506 aa21.22■□□□□ 0.99
TRIM47-201ENST00000254816 UQCRHLA0A096LP55 91 aa21.22■□□□□ 0.99
TRIM47-201ENST00000254816 IQCA1LA6NCM1 817 aa21.22■□□□□ 0.99
TRIM47-201ENST00000254816 SMTNL1A8MU46 457 aa21.22■□□□□ 0.99
TRIM47-201ENST00000254816 UQCRHP07919 91 aa21.22■□□□□ 0.99
TRIM47-201ENST00000254816 TRMT44Q8IYL2 757 aaKnown RBP21.22■□□□□ 0.99
TRIM47-201ENST00000254816 MLKLQ8NB16 471 aa21.22■□□□□ 0.99
TRIM47-201ENST00000254816 BLOC1S4Q9NUP1 217 aa21.22■□□□□ 0.99
TRIM47-201ENST00000254816 CLEC11AQ9Y240 323 aa21.22■□□□□ 0.99
TRIM47-201ENST00000254816 TERF1P54274 439 aa21.21■□□□□ 0.99
TRIM47-201ENST00000254816 CCDC186Q7Z3E2 898 aa21.21■□□□□ 0.99
TRIM47-201ENST00000254816 KCNK18Q7Z418 384 aa21.21■□□□□ 0.99
TRIM47-201ENST00000254816 MCF2L2Q86YR7 1114 aa21.21■□□□□ 0.99
TRIM47-201ENST00000254816 HSD3B7Q9H2F3 369 aa21.21■□□□□ 0.99
TRIM47-201ENST00000254816 CUEDC2Q9H467 287 aa21.21■□□□□ 0.99
TRIM47-201ENST00000254816 IRF6O14896 467 aa21.21■□□□□ 0.99
TRIM47-201ENST00000254816 IKBKBO14920 756 aa21.21■□□□□ 0.99
TRIM47-201ENST00000254816 MYL5Q02045 173 aa21.21■□□□□ 0.99
TRIM47-201ENST00000254816 TMEM132BQ14DG7 1078 aa21.21■□□□□ 0.99
TRIM47-201ENST00000254816 SNRNP48Q6IEG0 339 aaKnown RBP21.21■□□□□ 0.99
TRIM47-201ENST00000254816 TEX2Q8IWB9 1127 aa21.21■□□□□ 0.99
TRIM47-201ENST00000254816 RBM46Q8TBY0 533 aaKnown RBP21.21■□□□□ 0.99
TRIM47-201ENST00000254816 EHMT1Q9H9B1 1298 aa21.21■□□□□ 0.99
TRIM47-201ENST00000254816 TPM3P06753 285 aa21.2■□□□□ 0.98
TRIM47-201ENST00000254816 CCT6AP40227 531 aaKnown RBP21.2■□□□□ 0.98
TRIM47-201ENST00000254816 SPIRE1Q08AE8 756 aa21.2■□□□□ 0.98
TRIM47-201ENST00000254816 MCM6Q14566 821 aa21.2■□□□□ 0.98
TRIM47-201ENST00000254816 NCAPH2Q6IBW4 605 aa21.2■□□□□ 0.98
TRIM47-201ENST00000254816 KLHL10Q6JEL2 608 aa21.2■□□□□ 0.98
TRIM47-201ENST00000254816 ANKRD13AQ8IZ07 590 aa21.2■□□□□ 0.98
TRIM47-201ENST00000254816 KIAA1524Q8TCG1 905 aa21.2■□□□□ 0.98
TRIM47-201ENST00000254816 PURBQ96QR8 312 aaKnown RBP21.2■□□□□ 0.98
TRIM47-201ENST00000254816 MED15Q96RN5 788 aa21.2■□□□□ 0.98
TRIM47-201ENST00000254816 ADAMTS5Q9UNA0 930 aa21.2■□□□□ 0.98
TRIM47-201ENST00000254816 LOC285556D6RIA3 1793 aa21.2■□□□□ 0.98
TRIM47-201ENST00000254816 TBX3O15119 743 aa21.2■□□□□ 0.98
TRIM47-201ENST00000254816 FDX1P10109 184 aa21.2■□□□□ 0.98
TRIM47-201ENST00000254816 RPS6P62753 249 aaKnown RBP21.2■□□□□ 0.98
TRIM47-201ENST00000254816 NSMFQ6X4W1 530 aa21.2■□□□□ 0.98
TRIM47-201ENST00000254816 IL31RAQ8NI17 732 aa21.2■□□□□ 0.98
TRIM47-201ENST00000254816 SYTL5Q8TDW5 730 aaPredicted RBP21.2■□□□□ 0.98
TRIM47-201ENST00000254816 RNF146Q9NTX7 359 aa21.2■□□□□ 0.98
TRIM47-201ENST00000254816 SPTLC3Q9NUV7 552 aa21.2■□□□□ 0.98
TRIM47-201ENST00000254816 DACH1Q9UI36 760 aa21.2■□□□□ 0.98
TRIM47-201ENST00000254816 ZNF214Q9UL59 606 aaPredicted RBP21.2■□□□□ 0.98
TRIM47-201ENST00000254816 SPDYE16A6NNV3 312 aaPredicted RBP21.19■□□□□ 0.98
TRIM47-201ENST00000254816 KLRC4O43908 158 aa21.19■□□□□ 0.98
TRIM47-201ENST00000254816 PEX10O60683 326 aa21.19■□□□□ 0.98
TRIM47-201ENST00000254816 LRMPQ12912 555 aa21.19■□□□□ 0.98
TRIM47-201ENST00000254816 TMEM119Q4V9L6 283 aa21.19■□□□□ 0.98
TRIM47-201ENST00000254816 MAP1SQ66K74 1059 aaPredicted RBP21.19■□□□□ 0.98
TRIM47-201ENST00000254816 SARM1Q6SZW1 724 aa21.19■□□□□ 0.98
TRIM47-201ENST00000254816 GADL1Q6ZQY3 521 aa21.19■□□□□ 0.98
TRIM47-201ENST00000254816 TAAR1Q96RJ0 339 aa21.19■□□□□ 0.98
TRIM47-201ENST00000254816 ATP1A3P13637 1013 aa21.18■□□□□ 0.98
TRIM47-201ENST00000254816 PLS1Q14651 629 aa21.18■□□□□ 0.98
TRIM47-201ENST00000254816 KMT5BQ4FZB7 885 aa21.18■□□□□ 0.98
TRIM47-201ENST00000254816 HSP90AA4PQ58FG1 418 aa21.18■□□□□ 0.98
TRIM47-201ENST00000254816 LARP4BQ92615 738 aaKnown RBP21.18■□□□□ 0.98
TRIM47-201ENST00000254816 MAGEF1Q9HAY2 307 aa21.18■□□□□ 0.98
TRIM47-201ENST00000254816 FANCLQ9NW38 375 aa21.18■□□□□ 0.98
TRIM47-201ENST00000254816 GDAQ9Y2T3 454 aa21.18■□□□□ 0.98
TRIM47-201ENST00000254816 POTEB3A0JP26 581 aa21.18■□□□□ 0.98
TRIM47-201ENST00000254816 PPP1R3GB7ZBB8 358 aa21.18■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms