RNA–Protein interactions for RNA: ENST00000254325.8

RFX1-201, Transcript of regulatory factor X1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RFX1, Length 4,332 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1-201ENST00000254325 ALS2CR12Q96Q35 445 aa17.45■□□□□ 0.38
RFX1-201ENST00000254325 C7orf25Q9BPX7 421 aa17.45■□□□□ 0.38
RFX1-201ENST00000254325 IRX2Q9BZI1 471 aaPredicted RBP17.45■□□□□ 0.38
RFX1-201ENST00000254325 UTP18Q9Y5J1 556 aaKnown RBP eCLIP17.45■□□□□ 0.38
RFX1-201ENST00000254325 TTC26A0AVF1 554 aa17.45■□□□□ 0.38
RFX1-201ENST00000254325 POTEB2H3BUK9 544 aa17.45■□□□□ 0.38
RFX1-201ENST00000254325 IQCEQ6IPM2 695 aa17.45■□□□□ 0.38
RFX1-201ENST00000254325 RAD9BQ6WBX8 426 aa17.45■□□□□ 0.38
RFX1-201ENST00000254325 CHURC1Q8WUH1 139 aa17.45■□□□□ 0.38
RFX1-201ENST00000254325 NLRC4Q9NPP4 1024 aa17.45■□□□□ 0.38
RFX1-201ENST00000254325 NRAPQ86VF7 1730 aa17.45■□□□□ 0.38
RFX1-201ENST00000254325 DDTLA6NHG4 134 aaPredicted RBP17.45■□□□□ 0.38
RFX1-201ENST00000254325 MEIS1O00470 390 aa17.45■□□□□ 0.38
RFX1-201ENST00000254325 C4orf32Q8N8J7 132 aa17.45■□□□□ 0.38
RFX1-201ENST00000254325 ONECUT3O60422 494 aaPredicted RBP17.44■□□□□ 0.38
RFX1-201ENST00000254325 PLA2G4BP0C869 781 aa17.44■□□□□ 0.38
RFX1-201ENST00000254325 PVALEFA0A1B0GWK0 134 aa17.44■□□□□ 0.38
RFX1-201ENST00000254325 E9PMD0 336 aa17.44■□□□□ 0.38
RFX1-201ENST00000254325 TACC1O75410 805 aa17.44■□□□□ 0.38
RFX1-201ENST00000254325 TBX2Q13207 712 aaPredicted RBP17.44■□□□□ 0.38
RFX1-201ENST00000254325 NYAP2Q9P242 653 aa17.44■□□□□ 0.38
RFX1-201ENST00000254325 MYMKA6NI61 221 aa17.44■□□□□ 0.38
RFX1-201ENST00000254325 POLR3GO15318 223 aaPredicted RBP17.44■□□□□ 0.38
RFX1-201ENST00000254325 UBXN2AP68543 259 aa17.44■□□□□ 0.38
RFX1-201ENST00000254325 PDIA5Q14554 519 aa17.44■□□□□ 0.38
RFX1-201ENST00000254325 CCDC93Q567U6 631 aa17.44■□□□□ 0.38
RFX1-201ENST00000254325 FBXO38Q6PIJ6 1188 aa17.44■□□□□ 0.38
RFX1-201ENST00000254325 MIGA2Q7L4E1 593 aa17.44■□□□□ 0.38
RFX1-201ENST00000254325 SYCP3Q8IZU3 236 aa17.44■□□□□ 0.38
RFX1-201ENST00000254325 TTLL6Q8N841 843 aa17.44■□□□□ 0.38
RFX1-201ENST00000254325 GBP3Q9H0R5 595 aa17.44■□□□□ 0.38
RFX1-201ENST00000254325 MRPL44Q9H9J2 332 aaKnown RBP17.44■□□□□ 0.38
RFX1-201ENST00000254325 NDUFA10O95299 355 aa17.43■□□□□ 0.38
RFX1-201ENST00000254325 ARHGAP4P98171 946 aa17.43■□□□□ 0.38
RFX1-201ENST00000254325 EN1Q05925 392 aaPredicted RBP17.43■□□□□ 0.38
RFX1-201ENST00000254325 DCAF17Q5H9S7 520 aaPredicted RBP17.43■□□□□ 0.38
RFX1-201ENST00000254325 CPXCR1Q8N123 301 aa17.43■□□□□ 0.38
RFX1-201ENST00000254325 STAT2P52630 851 aa17.43■□□□□ 0.38
RFX1-201ENST00000254325 TPH2Q8IWU9 490 aa17.43■□□□□ 0.38
RFX1-201ENST00000254325 POTEB3A0JP26 581 aa17.43■□□□□ 0.38
RFX1-201ENST00000254325 POTECB2RU33 542 aa17.43■□□□□ 0.38
RFX1-201ENST00000254325 NDUFB10O96000 172 aa17.43■□□□□ 0.38
RFX1-201ENST00000254325 SEMA3FQ13275 785 aa17.43■□□□□ 0.38
RFX1-201ENST00000254325 STYK1Q6J9G0 422 aa17.43■□□□□ 0.38
RFX1-201ENST00000254325 POTEBQ6S5H4 581 aa17.43■□□□□ 0.38
RFX1-201ENST00000254325 ANKRD7Q92527 254 aa17.43■□□□□ 0.38
RFX1-201ENST00000254325 CRACR2AQ9BSW2 395 aa17.43■□□□□ 0.38
RFX1-201ENST00000254325 BTAF1O14981 1849 aa17.43■□□□□ 0.38
RFX1-201ENST00000254325 MYH6P13533 1939 aa17.43■□□□□ 0.38
RFX1-201ENST00000254325 ITIH6Q6UXX5 1313 aa17.43■□□□□ 0.38
RFX1-201ENST00000254325 RAPGEF1Q13905 1077 aa17.43■□□□□ 0.38
RFX1-201ENST00000254325 MAN2A1Q16706 1144 aa17.43■□□□□ 0.38
RFX1-201ENST00000254325 SLC35G1Q2M3R5 365 aa17.43■□□□□ 0.38
RFX1-201ENST00000254325 STXBP4Q6ZWJ1 553 aa17.43■□□□□ 0.38
RFX1-201ENST00000254325 MTRQ99707 1265 aa17.43■□□□□ 0.38
RFX1-201ENST00000254325 HAUS4Q9H6D7 363 aa17.43■□□□□ 0.38
RFX1-201ENST00000254325 PCDHAC2Q9Y5I4 1007 aa17.43■□□□□ 0.38
RFX1-201ENST00000254325 STAT3P40763 770 aa17.42■□□□□ 0.38
RFX1-201ENST00000254325 AP3B2Q13367 1082 aa17.42■□□□□ 0.38
RFX1-201ENST00000254325 NAALADL2Q58DX5 795 aa17.42■□□□□ 0.38
RFX1-201ENST00000254325 RETREG2Q8NC44 543 aa17.42■□□□□ 0.38
RFX1-201ENST00000254325 GCOM1H8Y6P7 765 aaPredicted RBP17.42■□□□□ 0.38
RFX1-201ENST00000254325 POLR2MP0CAP2 368 aa17.42■□□□□ 0.38
RFX1-201ENST00000254325 FXR2P51116 673 aaKnown RBP eCLIP17.42■□□□□ 0.38
RFX1-201ENST00000254325 NDST4Q9H3R1 872 aa17.42■□□□□ 0.38
RFX1-201ENST00000254325 SEPT11Q9NVA2 429 aaKnown RBP17.42■□□□□ 0.38
RFX1-201ENST00000254325 ARAP2Q8WZ64 1704 aa17.42■□□□□ 0.38
RFX1-201ENST00000254325 DDX39AO00148 427 aaKnown RBP17.42■□□□□ 0.38
RFX1-201ENST00000254325 ZBED6P86452 979 aa17.42■□□□□ 0.38
RFX1-201ENST00000254325 FKBP3Q00688 224 aaKnown RBP17.42■□□□□ 0.38
RFX1-201ENST00000254325 PSMD2Q13200 908 aa17.42■□□□□ 0.38
RFX1-201ENST00000254325 GRB10Q13322 594 aa17.42■□□□□ 0.38
RFX1-201ENST00000254325 TUBB2AQ13885 445 aa17.42■□□□□ 0.38
RFX1-201ENST00000254325 ZBTB9Q96C00 473 aa17.42■□□□□ 0.38
RFX1-201ENST00000254325 TUBB2BQ9BVA1 445 aa17.42■□□□□ 0.38
RFX1-201ENST00000254325 CACNA1SQ13698 1873 aa17.42■□□□□ 0.38
RFX1-201ENST00000254325 EIF3JO75822 258 aaKnown RBP17.41■□□□□ 0.38
RFX1-201ENST00000254325 GCNT3O95395 438 aa17.41■□□□□ 0.38
RFX1-201ENST00000254325 MATR3P43243 847 aaKnown RBP eCLIP17.41■□□□□ 0.38
RFX1-201ENST00000254325 PMS1P54277 932 aaKnown RBP17.41■□□□□ 0.38
RFX1-201ENST00000254325 CDC23Q9UJX2 597 aa17.41■□□□□ 0.38
RFX1-201ENST00000254325 SERPINA10Q9UK55 444 aa17.41■□□□□ 0.38
RFX1-201ENST00000254325 CHP1Q99653 195 aa17.41■□□□□ 0.38
RFX1-201ENST00000254325 ZNF277Q9NRM2 450 aaPredicted RBP17.41■□□□□ 0.38
RFX1-201ENST00000254325 ZBTB21Q9ULJ3 1066 aa17.41■□□□□ 0.38
RFX1-201ENST00000254325 PLSCR1O15162 318 aa17.41■□□□□ 0.38
RFX1-201ENST00000254325 GAS7O60861 476 aa17.41■□□□□ 0.38
RFX1-201ENST00000254325 RPL13P26373 211 aaKnown RBP17.41■□□□□ 0.38
RFX1-201ENST00000254325 LRRC63Q05C16 580 aa17.41■□□□□ 0.38
RFX1-201ENST00000254325 CKAP4Q07065 602 aaKnown RBP17.41■□□□□ 0.38
RFX1-201ENST00000254325 PLS1Q14651 629 aa17.41■□□□□ 0.38
RFX1-201ENST00000254325 MED15Q96RN5 788 aa17.41■□□□□ 0.38
RFX1-201ENST00000254325 PAFAH1B1P43034 410 aa17.4■□□□□ 0.38
RFX1-201ENST00000254325 COASYQ13057 564 aa17.4■□□□□ 0.38
RFX1-201ENST00000254325 ADAM9Q13443 819 aa17.4■□□□□ 0.38
RFX1-201ENST00000254325 VWA3BQ502W6 1294 aa17.4■□□□□ 0.38
RFX1-201ENST00000254325 PROM2Q8N271 834 aa17.4■□□□□ 0.38
RFX1-201ENST00000254325 GPR161Q8N6U8 529 aaKnown RBP17.4■□□□□ 0.38
RFX1-201ENST00000254325 SMCR8Q8TEV9 937 aaPredicted RBP17.4■□□□□ 0.38
RFX1-201ENST00000254325 IFIH1Q9BYX4 1025 aaKnown RBP17.4■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms