RNA–Protein interactions for RNA: ENST00000253122.9

SLC6A8-201, Transcript of solute carrier family 6 member 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC6A8, Length 3,763 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A8-201ENST00000253122 PHF20Q9BVI0 1012 aa17.49■□□□□ 0.39
SLC6A8-201ENST00000253122 BCL9O00512 1426 aa17.48■□□□□ 0.39
SLC6A8-201ENST00000253122 SRGNP10124 158 aa17.48■□□□□ 0.39
SLC6A8-201ENST00000253122 NLRP10Q86W26 655 aa17.48■□□□□ 0.39
SLC6A8-201ENST00000253122 CCDC155Q8N6L0 562 aa17.48■□□□□ 0.39
SLC6A8-201ENST00000253122 KANSL2Q9H9L4 492 aa17.48■□□□□ 0.39
SLC6A8-201ENST00000253122 SLC1A4P43007 532 aa17.48■□□□□ 0.39
SLC6A8-201ENST00000253122 GIGYF2Q6Y7W6 1299 aaKnown RBP17.48■□□□□ 0.39
SLC6A8-201ENST00000253122 ATP6V1G3Q96LB4 118 aa17.48■□□□□ 0.39
SLC6A8-201ENST00000253122 UTP11Q9Y3A2 253 aaKnown RBP17.48■□□□□ 0.39
SLC6A8-201ENST00000253122 C5P01031 1676 aa17.48■□□□□ 0.39
SLC6A8-201ENST00000253122 COL16A1Q07092 1604 aaPredicted RBP17.48■□□□□ 0.39
SLC6A8-201ENST00000253122 HMGB1P1B2RPK0 211 aaPredicted RBP17.48■□□□□ 0.39
SLC6A8-201ENST00000253122 CTNND1O60716 968 aaKnown RBP17.48■□□□□ 0.39
SLC6A8-201ENST00000253122 PRPF6O94906 941 aaKnown RBP17.48■□□□□ 0.39
SLC6A8-201ENST00000253122 PPP1R2P41236 205 aa17.48■□□□□ 0.39
SLC6A8-201ENST00000253122 TMTC3Q6ZXV5 915 aa17.48■□□□□ 0.39
SLC6A8-201ENST00000253122 LRP10Q7Z4F1 713 aa17.48■□□□□ 0.39
SLC6A8-201ENST00000253122 MGARPQ8TDB4 240 aa17.48■□□□□ 0.39
SLC6A8-201ENST00000253122 KAT2BQ92831 832 aa17.48■□□□□ 0.39
SLC6A8-201ENST00000253122 NIP7Q9Y221 180 aaKnown RBP eCLIP17.48■□□□□ 0.39
SLC6A8-201ENST00000253122 STK38LQ9Y2H1 464 aa17.48■□□□□ 0.39
SLC6A8-201ENST00000253122 SPATA31A6Q5VVP1 1343 aa17.47■□□□□ 0.39
SLC6A8-201ENST00000253122 MAP3K15Q6ZN16 1313 aa17.47■□□□□ 0.39
SLC6A8-201ENST00000253122 KIF4AO95239 1232 aa17.47■□□□□ 0.39
SLC6A8-201ENST00000253122 TMOD1P28289 359 aa17.47■□□□□ 0.39
SLC6A8-201ENST00000253122 GCKP35557 465 aa17.47■□□□□ 0.39
SLC6A8-201ENST00000253122 MDH1P40925 334 aaKnown RBP17.47■□□□□ 0.39
SLC6A8-201ENST00000253122 VPS72Q15906 364 aa17.47■□□□□ 0.39
SLC6A8-201ENST00000253122 SNX29Q8TEQ0 813 aa17.47■□□□□ 0.39
SLC6A8-201ENST00000253122 CCDC87Q9NVE4 849 aa17.47■□□□□ 0.39
SLC6A8-201ENST00000253122 ATP8A1Q9Y2Q0 1164 aa17.47■□□□□ 0.39
SLC6A8-201ENST00000253122 COL22A1Q8NFW1 1626 aaPredicted RBP17.47■□□□□ 0.39
SLC6A8-201ENST00000253122 LOC102724428A0A0B4J2F2 783 aa17.47■□□□□ 0.39
SLC6A8-201ENST00000253122 TMEM110-MUSTN1A8MSY1 372 aa17.47■□□□□ 0.39
SLC6A8-201ENST00000253122 PBX1P40424 430 aa17.47■□□□□ 0.39
SLC6A8-201ENST00000253122 SIK1P57059 783 aa17.47■□□□□ 0.39
SLC6A8-201ENST00000253122 NONOQ15233 471 aaKnown RBP eCLIP17.47■□□□□ 0.391e-6■■□□□ 14.2
SLC6A8-201ENST00000253122 VWA3BQ502W6 1294 aa17.47■□□□□ 0.39
SLC6A8-201ENST00000253122 MSL3Q8N5Y2 521 aaKnown RBP17.47■□□□□ 0.39
SLC6A8-201ENST00000253122 PNMA1Q8ND90 353 aa17.47■□□□□ 0.39
SLC6A8-201ENST00000253122 DNAJC7Q99615 494 aa17.47■□□□□ 0.39
SLC6A8-201ENST00000253122 GOLGA6L10A0A0M3HER8 536 aa17.47■□□□□ 0.39
SLC6A8-201ENST00000253122 GMNCA6NCL1 334 aa17.47■□□□□ 0.39
SLC6A8-201ENST00000253122 OR52Z1P0C646 297 aa17.47■□□□□ 0.39
SLC6A8-201ENST00000253122 CYP19A1P11511 503 aaPredicted RBP17.47■□□□□ 0.39
SLC6A8-201ENST00000253122 STK4Q13043 487 aa17.47■□□□□ 0.39
SLC6A8-201ENST00000253122 MAN2A1Q16706 1144 aa17.47■□□□□ 0.39
SLC6A8-201ENST00000253122 MMGT1Q8N4V1 131 aa17.47■□□□□ 0.39
SLC6A8-201ENST00000253122 KCNK9Q9NPC2 374 aa17.47■□□□□ 0.39
SLC6A8-201ENST00000253122 HAUS2Q9NVX0 235 aa17.47■□□□□ 0.39
SLC6A8-201ENST00000253122 SWAP70Q9UH65 585 aa17.47■□□□□ 0.39
SLC6A8-201ENST00000253122 KIRREL3Q8IZU9 778 aa17.46■□□□□ 0.39
SLC6A8-201ENST00000253122 PAIP2Q9BPZ3 127 aaKnown RBP17.46■□□□□ 0.39
SLC6A8-201ENST00000253122 ISCA1Q9BUE6 129 aa17.46■□□□□ 0.39
SLC6A8-201ENST00000253122 SH2D4AQ9H788 454 aa17.46■□□□□ 0.39
SLC6A8-201ENST00000253122 BIN2Q9UBW5 565 aaPredicted RBP17.46■□□□□ 0.39
SLC6A8-201ENST00000253122 DHX9Q08211 1270 aaKnown RBP17.46■□□□□ 0.39
SLC6A8-201ENST00000253122 IKQ13123 557 aaPredicted RBP17.46■□□□□ 0.39
SLC6A8-201ENST00000253122 FAM133BQ5BKY9 247 aaKnown RBP17.46■□□□□ 0.39
SLC6A8-201ENST00000253122 LRCH2Q5VUJ6 765 aa17.46■□□□□ 0.39
SLC6A8-201ENST00000253122 PPP1R3FQ6ZSY5 799 aaPredicted RBP17.46■□□□□ 0.39
SLC6A8-201ENST00000253122 SRBD1Q8N5C6 995 aaKnown RBP17.46■□□□□ 0.39
SLC6A8-201ENST00000253122 FAM133AQ8N9E0 248 aa17.46■□□□□ 0.39
SLC6A8-201ENST00000253122 WHAMMQ8TF30 809 aa17.46■□□□□ 0.39
SLC6A8-201ENST00000253122 WNT7AO00755 349 aa17.45■□□□□ 0.38
SLC6A8-201ENST00000253122 HERC4Q5GLZ8 1057 aaPredicted RBP17.45■□□□□ 0.38
SLC6A8-201ENST00000253122 NSRP1Q9H0G5 558 aaKnown RBP17.45■□□□□ 0.38
SLC6A8-201ENST00000253122 ABCC12Q96J65 1359 aa17.45■□□□□ 0.38
SLC6A8-201ENST00000253122 GNA11P29992 359 aa17.45■□□□□ 0.38
SLC6A8-201ENST00000253122 KCTD19Q17RG1 926 aaPredicted RBP17.45■□□□□ 0.38
SLC6A8-201ENST00000253122 ARL6IP4Q66PJ3 421 aaKnown RBP17.45■□□□□ 0.38
SLC6A8-201ENST00000253122 CCDC63Q8NA47 563 aa17.45■□□□□ 0.38
SLC6A8-201ENST00000253122 CPVLQ9H3G5 476 aa17.45■□□□□ 0.38
SLC6A8-201ENST00000253122 DDAH1O94760 285 aa17.45■□□□□ 0.38
SLC6A8-201ENST00000253122 ELF1P32519 619 aa17.45■□□□□ 0.38
SLC6A8-201ENST00000253122 IL6STP40189 918 aaPredicted RBP17.45■□□□□ 0.38
SLC6A8-201ENST00000253122 EP400NLQ6ZTU2 488 aa17.45■□□□□ 0.38
SLC6A8-201ENST00000253122 DDX42Q86XP3 938 aaKnown RBP eCLIP17.45■□□□□ 0.382e-6■■■□□ 15.2
SLC6A8-201ENST00000253122 LMBR1Q8WVP7 490 aa17.45■□□□□ 0.38
SLC6A8-201ENST00000253122 SLC8A1P32418 973 aa17.44■□□□□ 0.38
SLC6A8-201ENST00000253122 MAGOHP61326 146 aaKnown RBP17.44■□□□□ 0.38
SLC6A8-201ENST00000253122 APTXQ7Z2E3 356 aaKnown RBP17.44■□□□□ 0.38
SLC6A8-201ENST00000253122 TBC1D1Q86TI0 1168 aaPredicted RBP17.44■□□□□ 0.38
SLC6A8-201ENST00000253122 MAGOHBQ96A72 148 aaKnown RBP17.44■□□□□ 0.38
SLC6A8-201ENST00000253122 PCDHA4Q9UN74 947 aa17.44■□□□□ 0.38
SLC6A8-201ENST00000253122 CD2APQ9Y5K6 639 aa17.44■□□□□ 0.38
SLC6A8-201ENST00000253122 KCPQ6ZWJ8 1503 aa17.44■□□□□ 0.38
SLC6A8-201ENST00000253122 SMCO2A6NFE2 343 aa17.44■□□□□ 0.38
SLC6A8-201ENST00000253122 PTGISQ16647 500 aa17.44■□□□□ 0.38
SLC6A8-201ENST00000253122 WDR59Q6PJI9 974 aa17.44■□□□□ 0.38
SLC6A8-201ENST00000253122 PARP9Q8IXQ6 854 aa17.44■□□□□ 0.38
SLC6A8-201ENST00000253122 CCDC13Q8IYE1 715 aa17.44■□□□□ 0.38
SLC6A8-201ENST00000253122 MYCBPAPQ8TBZ2 947 aa17.44■□□□□ 0.38
SLC6A8-201ENST00000253122 AENQ8WTP8 325 aaKnown RBP17.44■□□□□ 0.38
SLC6A8-201ENST00000253122 DDX47Q9H0S4 455 aaKnown RBP17.44■□□□□ 0.38
SLC6A8-201ENST00000253122 SLC40A1Q9NP59 571 aa17.44■□□□□ 0.38
SLC6A8-201ENST00000253122 GSTTP1A0A1W2PQM5 241 aa17.44■□□□□ 0.38
SLC6A8-201ENST00000253122 AGPSO00116 658 aa17.44■□□□□ 0.38
SLC6A8-201ENST00000253122 GLI1P08151 1106 aa17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 116.1 ms