RNA–Protein interactions for RNA: ENST00000248948.3

VPREB3-201, Transcript of V-set pre-B cell surrogate light chain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPREB3, Length 610 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPREB3-201ENST00000248948 A0A1W2PPC1 479 aa14.69□□□□□ -0.06
VPREB3-201ENST00000248948 hCG_1642624A0A1W2PR95 340 aa14.69□□□□□ -0.06
VPREB3-201ENST00000248948 ARIH2O95376 493 aa14.69□□□□□ -0.06
VPREB3-201ENST00000248948 NAPAP54920 295 aa14.69□□□□□ -0.06
VPREB3-201ENST00000248948 TMEM63BQ5T3F8 832 aa14.69□□□□□ -0.06
VPREB3-201ENST00000248948 CHRDL2Q6WN34 429 aa14.69□□□□□ -0.06
VPREB3-201ENST00000248948 IL31RAQ8NI17 732 aa14.69□□□□□ -0.06
VPREB3-201ENST00000248948 GPKOWQ92917 476 aaPredicted RBP eCLIP14.69□□□□□ -0.06
VPREB3-201ENST00000248948 TOX2Q96NM4 488 aa14.69□□□□□ -0.06
VPREB3-201ENST00000248948 RNF26Q9BY78 433 aaPredicted RBP14.69□□□□□ -0.06
VPREB3-201ENST00000248948 PSTPIP2Q9H939 334 aa14.69□□□□□ -0.06
VPREB3-201ENST00000248948 PDLIM7Q9NR12 457 aa14.69□□□□□ -0.06
VPREB3-201ENST00000248948 BARHL2Q9NY43 387 aa14.69□□□□□ -0.06
VPREB3-201ENST00000248948 PRKAG2Q9UGJ0 569 aa14.69□□□□□ -0.06
VPREB3-201ENST00000248948 ZMYND8Q9ULU4 1186 aaPredicted RBP14.69□□□□□ -0.06
VPREB3-201ENST00000248948 MRVI1Q9Y6F6 885 aa14.69□□□□□ -0.06
VPREB3-201ENST00000248948 ESYT2A0FGR8 921 aa14.68□□□□□ -0.06
VPREB3-201ENST00000248948 A6NJR5 290 aa14.68□□□□□ -0.06
VPREB3-201ENST00000248948 STXBP3O00186 592 aa14.68□□□□□ -0.06
VPREB3-201ENST00000248948 KPNA6O60684 536 aa14.68□□□□□ -0.06
VPREB3-201ENST00000248948 GH1P01241 217 aa14.68□□□□□ -0.06
VPREB3-201ENST00000248948 CLTBP09497 229 aa14.68□□□□□ -0.06
VPREB3-201ENST00000248948 PTGS1P23219 599 aa14.68□□□□□ -0.06
VPREB3-201ENST00000248948 PDIA3P30101 505 aaKnown RBP14.68□□□□□ -0.06
VPREB3-201ENST00000248948 ADD1P35611 737 aaKnown RBP14.68□□□□□ -0.06
VPREB3-201ENST00000248948 PFKFB3Q16875 520 aaPredicted RBP14.68□□□□□ -0.06
VPREB3-201ENST00000248948 GNPTABQ3T906 1256 aa14.68□□□□□ -0.06
VPREB3-201ENST00000248948 PCNX4Q63HM2 1172 aa14.68□□□□□ -0.06
VPREB3-201ENST00000248948 USP17L6PQ6QN14 398 aa14.68□□□□□ -0.06
VPREB3-201ENST00000248948 CXCL17Q6UXB2 119 aa14.68□□□□□ -0.06
VPREB3-201ENST00000248948 SEPT14Q6ZU15 432 aa14.68□□□□□ -0.06
VPREB3-201ENST00000248948 ZNF274Q96GC6 653 aaPredicted RBP14.68□□□□□ -0.06
VPREB3-201ENST00000248948 INPP4AQ96PE3 977 aaPredicted RBP14.68□□□□□ -0.06
VPREB3-201ENST00000248948 GLT8D2Q9H1C3 349 aa14.68□□□□□ -0.06
VPREB3-201ENST00000248948 EHMT1Q9H9B1 1298 aa14.68□□□□□ -0.06
VPREB3-201ENST00000248948 PDRG1Q9NUG6 133 aa14.68□□□□□ -0.06
VPREB3-201ENST00000248948 DDX41Q9UJV9 622 aaKnown RBP14.68□□□□□ -0.06
VPREB3-201ENST00000248948 SPDYE3A6NKU9 549 aa14.67□□□□□ -0.06
VPREB3-201ENST00000248948 PQBP1O60828 265 aaKnown RBP14.67□□□□□ -0.06
VPREB3-201ENST00000248948 RGS20O76081 388 aa14.67□□□□□ -0.06
VPREB3-201ENST00000248948 TGFB3P10600 412 aa14.67□□□□□ -0.06
VPREB3-201ENST00000248948 MYCLP12524 364 aaPredicted RBP14.67□□□□□ -0.06
VPREB3-201ENST00000248948 SCG2P13521 617 aa14.67□□□□□ -0.06
VPREB3-201ENST00000248948 IFNAR1P17181 557 aa14.67□□□□□ -0.06
VPREB3-201ENST00000248948 SYN1P17600 705 aa14.67□□□□□ -0.06
VPREB3-201ENST00000248948 BMP8BP34820 402 aa14.67□□□□□ -0.06
VPREB3-201ENST00000248948 ADCY7P51828 1080 aa14.67□□□□□ -0.06
VPREB3-201ENST00000248948 PURAQ00577 322 aaKnown RBP14.67□□□□□ -0.06
VPREB3-201ENST00000248948 TLE2Q04725 743 aa14.67□□□□□ -0.06
VPREB3-201ENST00000248948 ARHGAP1Q07960 439 aa14.67□□□□□ -0.06
VPREB3-201ENST00000248948 NTRK3Q16288 839 aa14.67□□□□□ -0.06
VPREB3-201ENST00000248948 TYW1BQ6NUM6 668 aa14.67□□□□□ -0.06
VPREB3-201ENST00000248948 SLC43A3Q8NBI5 491 aa14.67□□□□□ -0.06
VPREB3-201ENST00000248948 CCDC12Q8WUD4 166 aaPredicted RBP14.67□□□□□ -0.06
VPREB3-201ENST00000248948 GDF15Q99988 308 aa14.67□□□□□ -0.06
VPREB3-201ENST00000248948 ALDH8A1Q9H2A2 487 aaPredicted RBP14.67□□□□□ -0.06
VPREB3-201ENST00000248948 RIC8AQ9NPQ8 531 aa14.67□□□□□ -0.06
VPREB3-201ENST00000248948 COLQQ9Y215 455 aaPredicted RBP14.67□□□□□ -0.06
VPREB3-201ENST00000248948 V9GY48 417 aaPredicted RBP14.67□□□□□ -0.06
VPREB3-201ENST00000248948 DCDC2CA8MYV0 355 aa14.66□□□□□ -0.06
VPREB3-201ENST00000248948 ARVCFO00192 962 aa14.66□□□□□ -0.06
VPREB3-201ENST00000248948 PRPF3O43395 683 aaKnown RBP14.66□□□□□ -0.06
VPREB3-201ENST00000248948 FIBPO43427 364 aa14.66□□□□□ -0.06
VPREB3-201ENST00000248948 MMP3P08254 477 aa14.66□□□□□ -0.06
VPREB3-201ENST00000248948 UBA1P22314 1058 aaKnown RBP14.66□□□□□ -0.06
VPREB3-201ENST00000248948 ICAM3P32942 547 aa14.66□□□□□ -0.06
VPREB3-201ENST00000248948 CDK7P50613 346 aa14.66□□□□□ -0.06
VPREB3-201ENST00000248948 AP3B2Q13367 1082 aa14.66□□□□□ -0.06
VPREB3-201ENST00000248948 ANKRD1Q15327 319 aa14.66□□□□□ -0.06
VPREB3-201ENST00000248948 C8orf34Q49A92 452 aa14.66□□□□□ -0.06
VPREB3-201ENST00000248948 FAM126BQ8IXS8 530 aa14.66□□□□□ -0.06
VPREB3-201ENST00000248948 PPTC7Q8NI37 304 aa14.66□□□□□ -0.06
VPREB3-201ENST00000248948 COPS5Q92905 334 aa14.66□□□□□ -0.06
VPREB3-201ENST00000248948 MTG1Q9BT17 334 aaPredicted RBP14.66□□□□□ -0.06
VPREB3-201ENST00000248948 PRDM5Q9NQX1 630 aaPredicted RBP14.66□□□□□ -0.06
VPREB3-201ENST00000248948 KIAA0355O15063 1070 aa14.65□□□□□ -0.06
VPREB3-201ENST00000248948 TLR3O15455 904 aaKnown RBP14.65□□□□□ -0.06
VPREB3-201ENST00000248948 FOSP01100 380 aaPredicted RBP14.65□□□□□ -0.06
VPREB3-201ENST00000248948 MAGEA10P43363 369 aaPredicted RBP14.65□□□□□ -0.06
VPREB3-201ENST00000248948 MRPS9P82933 396 aaKnown RBP14.65□□□□□ -0.06
VPREB3-201ENST00000248948 AKAP17AQ02040 695 aaKnown RBP14.65□□□□□ -0.06
VPREB3-201ENST00000248948 ITGA7Q13683 1181 aa14.65□□□□□ -0.06
VPREB3-201ENST00000248948 LAMC2Q13753 1193 aa14.65□□□□□ -0.06
VPREB3-201ENST00000248948 UBE2SQ16763 222 aa14.65□□□□□ -0.06
VPREB3-201ENST00000248948 LY6KQ17RY6 165 aa14.65□□□□□ -0.06
VPREB3-201ENST00000248948 HABP4Q5JVS0 413 aaKnown RBP14.65□□□□□ -0.06
VPREB3-201ENST00000248948 MCTP2Q6DN12 878 aa14.65□□□□□ -0.06
VPREB3-201ENST00000248948 CPLX2Q6PUV4 134 aaKnown RBP14.65□□□□□ -0.06
VPREB3-201ENST00000248948 TRIM22Q8IYM9 498 aa14.65□□□□□ -0.06
VPREB3-201ENST00000248948 CCDC148Q8NFR7 591 aa14.65□□□□□ -0.06
VPREB3-201ENST00000248948 LBHD1Q9BQE6 289 aaPredicted RBP14.65□□□□□ -0.06
VPREB3-201ENST00000248948 TBX21Q9UL17 535 aa14.65□□□□□ -0.06
VPREB3-201ENST00000248948 CPLX1O14810 134 aa14.64□□□□□ -0.07
VPREB3-201ENST00000248948 HOXD8P13378 290 aaPredicted RBP14.64□□□□□ -0.07
VPREB3-201ENST00000248948 CLK2P49760 499 aaKnown RBP14.64□□□□□ -0.07
VPREB3-201ENST00000248948 CCT2P78371 535 aaKnown RBP14.64□□□□□ -0.07
VPREB3-201ENST00000248948 FAAP100Q0VG06 881 aa14.64□□□□□ -0.07
VPREB3-201ENST00000248948 PKN1Q16512 942 aa14.64□□□□□ -0.07
VPREB3-201ENST00000248948 NLRX1Q86UT6 975 aa14.64□□□□□ -0.07
VPREB3-201ENST00000248948 FAM177A1Q8N128 213 aaPredicted RBP14.64□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms