RNA–Protein interactions for RNA: ENST00000247020.8

SDF2-201, Transcript of stromal cell derived factor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDF2, Length 1,568 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-201ENST00000247020 RMND1Q9NWS8 449 aa15.98■□□□□ 0.15
SDF2-201ENST00000247020 MAN1B1Q9UKM7 699 aa15.98■□□□□ 0.15
SDF2-201ENST00000247020 ZNF214Q9UL59 606 aaPredicted RBP15.98■□□□□ 0.15
SDF2-201ENST00000247020 LOXHD1Q8IVV2 1947 aa15.97■□□□□ 0.15
SDF2-201ENST00000247020 IGLV3-22A0A075B6J6 115 aa15.97■□□□□ 0.15
SDF2-201ENST00000247020 FAM86B1E9PN63 330 aa15.97■□□□□ 0.15
SDF2-201ENST00000247020 NFIBO00712 420 aa15.97■□□□□ 0.15
SDF2-201ENST00000247020 FAM86B2P0C5J1 330 aa15.97■□□□□ 0.15
SDF2-201ENST00000247020 PLCG1P19174 1290 aa15.97■□□□□ 0.15
SDF2-201ENST00000247020 CDC25AP30304 524 aa15.97■□□□□ 0.15
SDF2-201ENST00000247020 AFMP43652 599 aa15.97■□□□□ 0.15
SDF2-201ENST00000247020 AMPD3Q01432 767 aa15.97■□□□□ 0.15
SDF2-201ENST00000247020 TTLL12Q14166 644 aaPredicted RBP15.97■□□□□ 0.15
SDF2-201ENST00000247020 PRR16Q569H4 304 aa15.97■□□□□ 0.15
SDF2-201ENST00000247020 DLK2Q6UY11 383 aa15.97■□□□□ 0.15
SDF2-201ENST00000247020 LBX2Q6XYB7 198 aa15.97■□□□□ 0.15
SDF2-201ENST00000247020 CDK5RAP3Q96JB5 506 aa15.97■□□□□ 0.15
SDF2-201ENST00000247020 TRERF1Q96PN7 1200 aa15.97■□□□□ 0.15
SDF2-201ENST00000247020 LRRC27Q9C0I9 530 aa15.97■□□□□ 0.15
SDF2-201ENST00000247020 BIN1O00499 593 aa15.96■□□□□ 0.15
SDF2-201ENST00000247020 BCRP11274 1271 aa15.96■□□□□ 0.15
SDF2-201ENST00000247020 CEP55Q53EZ4 464 aa15.96■□□□□ 0.15
SDF2-201ENST00000247020 HAUS3Q68CZ6 603 aa15.96■□□□□ 0.15
SDF2-201ENST00000247020 SNRNP48Q6IEG0 339 aaKnown RBP15.96■□□□□ 0.15
SDF2-201ENST00000247020 DHX40Q8IX18 779 aaKnown RBP15.96■□□□□ 0.15
SDF2-201ENST00000247020 SNX29Q8TEQ0 813 aa15.96■□□□□ 0.15
SDF2-201ENST00000247020 RNF146Q9NTX7 359 aa15.96■□□□□ 0.15
SDF2-201ENST00000247020 CLEC11AQ9Y240 323 aa15.96■□□□□ 0.15
SDF2-201ENST00000247020 UTRNP46939 3433 aa15.96■□□□□ 0.14
SDF2-201ENST00000247020 POTEMA6NI47 508 aa15.96■□□□□ 0.14
SDF2-201ENST00000247020 IRF6O14896 467 aa15.96■□□□□ 0.14
SDF2-201ENST00000247020 TPM4P67936 248 aa15.96■□□□□ 0.14
SDF2-201ENST00000247020 PABPC4Q13310 644 aaKnown RBP eCLIP15.96■□□□□ 0.145e-6■□□□□ 10.8
SDF2-201ENST00000247020 KCNB1Q14721 858 aa15.96■□□□□ 0.14
SDF2-201ENST00000247020 TMEM119Q4V9L6 283 aa15.96■□□□□ 0.14
SDF2-201ENST00000247020 MUM1L1Q5H9M0 696 aa15.96■□□□□ 0.14
SDF2-201ENST00000247020 PCNX4Q63HM2 1172 aa15.96■□□□□ 0.14
SDF2-201ENST00000247020 XRRA1Q6P2D8 792 aa15.96■□□□□ 0.14
SDF2-201ENST00000247020 SARM1Q6SZW1 724 aa15.96■□□□□ 0.14
SDF2-201ENST00000247020 RNF207Q6ZRF8 634 aa15.96■□□□□ 0.14
SDF2-201ENST00000247020 FASTKD5Q7L8L6 764 aaKnown RBP15.96■□□□□ 0.14
SDF2-201ENST00000247020 GRAMD1CQ8IYS0 662 aa15.96■□□□□ 0.14
SDF2-201ENST00000247020 ERMNQ8TAM6 284 aa15.96■□□□□ 0.14
SDF2-201ENST00000247020 SYTL5Q8TDW5 730 aaPredicted RBP15.96■□□□□ 0.14
SDF2-201ENST00000247020 OTUD5Q96G74 571 aa15.96■□□□□ 0.14
SDF2-201ENST00000247020 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.95■□□□□ 0.14
SDF2-201ENST00000247020 MEIS1O00470 390 aa15.95■□□□□ 0.14
SDF2-201ENST00000247020 MSH4O15457 936 aa15.95■□□□□ 0.14
SDF2-201ENST00000247020 RPS6P62753 249 aaKnown RBP15.95■□□□□ 0.14
SDF2-201ENST00000247020 SPIRE1Q08AE8 756 aa15.95■□□□□ 0.14
SDF2-201ENST00000247020 GRB10Q13322 594 aa15.95■□□□□ 0.14
SDF2-201ENST00000247020 TMEM132BQ14DG7 1078 aa15.95■□□□□ 0.14
SDF2-201ENST00000247020 CHST13Q8NET6 341 aa15.95■□□□□ 0.14
SDF2-201ENST00000247020 WNK4Q96J92 1243 aa15.95■□□□□ 0.14
SDF2-201ENST00000247020 MTRQ99707 1265 aa15.95■□□□□ 0.14
SDF2-201ENST00000247020 AGTPBP1Q9UPW5 1226 aa15.95■□□□□ 0.14
SDF2-201ENST00000247020 TRPM7Q96QT4 1865 aa15.94■□□□□ 0.14
SDF2-201ENST00000247020 MUTP22033 750 aa15.94■□□□□ 0.14
SDF2-201ENST00000247020 ERCC5P28715 1186 aaPredicted RBP15.94■□□□□ 0.14
SDF2-201ENST00000247020 STAT3P40763 770 aa15.94■□□□□ 0.14
SDF2-201ENST00000247020 CNNM4Q6P4Q7 775 aa15.94■□□□□ 0.14
SDF2-201ENST00000247020 PLA2G4DQ86XP0 818 aa15.94■□□□□ 0.14
SDF2-201ENST00000247020 AOPEPQ8N6M6 819 aa15.94■□□□□ 0.14
SDF2-201ENST00000247020 LARP4BQ92615 738 aaKnown RBP15.94■□□□□ 0.14
SDF2-201ENST00000247020 SLC5A5Q92911 643 aa15.94■□□□□ 0.14
SDF2-201ENST00000247020 CCDC47Q96A33 483 aaKnown RBP15.94■□□□□ 0.14
SDF2-201ENST00000247020 OPTNQ96CV9 577 aa15.94■□□□□ 0.14
SDF2-201ENST00000247020 CLMNQ96JQ2 1002 aa15.94■□□□□ 0.14
SDF2-201ENST00000247020 PNMA5Q96PV4 448 aa15.94■□□□□ 0.14
SDF2-201ENST00000247020 C7orf25Q9BPX7 421 aa15.94■□□□□ 0.14
SDF2-201ENST00000247020 MXRA8Q9BRK3 442 aa15.94■□□□□ 0.14
SDF2-201ENST00000247020 ACAD9Q9H845 621 aa15.94■□□□□ 0.14
SDF2-201ENST00000247020 COL20A1Q9P218 1284 aa15.94■□□□□ 0.14
SDF2-201ENST00000247020 BMP6P22004 513 aa15.93■□□□□ 0.14
SDF2-201ENST00000247020 COPB2P35606 906 aa15.93■□□□□ 0.14
SDF2-201ENST00000247020 MYL5Q02045 173 aa15.93■□□□□ 0.14
SDF2-201ENST00000247020 CUL4BQ13620 913 aa15.93■□□□□ 0.14
SDF2-201ENST00000247020 TREML2Q5T2D2 321 aa15.93■□□□□ 0.14
SDF2-201ENST00000247020 GADL1Q6ZQY3 521 aa15.93■□□□□ 0.14
SDF2-201ENST00000247020 SV2BQ7L1I2 683 aa15.93■□□□□ 0.14
SDF2-201ENST00000247020 CNKSR2Q8WXI2 1034 aa15.93■□□□□ 0.14
SDF2-201ENST00000247020 FBXO40Q9UH90 709 aa15.93■□□□□ 0.14
SDF2-201ENST00000247020 LCTP09848 1927 aa15.93■□□□□ 0.14
SDF2-201ENST00000247020 A0A087WWV3 80 aa15.92■□□□□ 0.14
SDF2-201ENST00000247020 ADCY5O95622 1261 aa15.92■□□□□ 0.14
SDF2-201ENST00000247020 RPN1P04843 607 aaKnown RBP15.92■□□□□ 0.14
SDF2-201ENST00000247020 IRX3P78415 501 aaPredicted RBP15.92■□□□□ 0.14
SDF2-201ENST00000247020 PPP2R5CQ13362 524 aa15.92■□□□□ 0.14
SDF2-201ENST00000247020 HS1BP3Q53T59 392 aa15.92■□□□□ 0.14
SDF2-201ENST00000247020 ZNF658Q5TYW1 1059 aaPredicted RBP15.92■□□□□ 0.14
SDF2-201ENST00000247020 DHX30Q7L2E3 1194 aaKnown RBP eCLIP15.92■□□□□ 0.14
SDF2-201ENST00000247020 RIOX2Q8IUF8 465 aa15.92■□□□□ 0.14
SDF2-201ENST00000247020 GTF3C2Q8WUA4 911 aaPredicted RBP15.92■□□□□ 0.14
SDF2-201ENST00000247020 RAD54LQ92698 747 aa15.92■□□□□ 0.14
SDF2-201ENST00000247020 RIT2Q99578 217 aa15.92■□□□□ 0.14
SDF2-201ENST00000247020 WDR11Q9BZH6 1224 aa15.92■□□□□ 0.14
SDF2-201ENST00000247020 HOMER2Q9NSB8 354 aa15.92■□□□□ 0.14
SDF2-201ENST00000247020 BLOC1S4Q9NUP1 217 aa15.92■□□□□ 0.14
SDF2-201ENST00000247020 VAV3Q9UKW4 847 aa15.92■□□□□ 0.14
SDF2-201ENST00000247020 RIPK3Q9Y572 518 aa15.92■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms