RNA–Protein interactions for RNA: ENST00000245908.10

SH2D3A-201, Transcript of SH2 domain containing 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SH2D3A, Length 2,296 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D3A-201ENST00000245908 MUM1L1Q5H9M0 696 aa24.05■■□□□ 1.44
SH2D3A-201ENST00000245908 SP8Q8IXZ3 490 aa24.05■■□□□ 1.44
SH2D3A-201ENST00000245908 RPGRIP1Q96KN7 1286 aa24.05■■□□□ 1.44
SH2D3A-201ENST00000245908 TSGA10Q9BZW7 698 aa24.05■■□□□ 1.44
SH2D3A-201ENST00000245908 SERPINB13Q9UIV8 391 aa24.05■■□□□ 1.44
SH2D3A-201ENST00000245908 USP14P54578 494 aa24.05■■□□□ 1.44
SH2D3A-201ENST00000245908 GPS2Q13227 327 aa24.05■■□□□ 1.44
SH2D3A-201ENST00000245908 KCNK18Q7Z418 384 aa24.05■■□□□ 1.44
SH2D3A-201ENST00000245908 TXLNBQ8N3L3 684 aa24.05■■□□□ 1.44
SH2D3A-201ENST00000245908 DDX12PQ92771 950 aa24.05■■□□□ 1.44
SH2D3A-201ENST00000245908 FEZ2Q9UHY8 353 aaPredicted RBP24.05■■□□□ 1.44
SH2D3A-201ENST00000245908 MYH7BA7E2Y1 1941 aa24.05■■□□□ 1.44
SH2D3A-201ENST00000245908 CKAP4Q07065 602 aaKnown RBP24.04■■□□□ 1.44
SH2D3A-201ENST00000245908 UBE2SQ16763 222 aa24.04■■□□□ 1.44
SH2D3A-201ENST00000245908 LRRC55Q6ZSA7 311 aa24.04■■□□□ 1.44
SH2D3A-201ENST00000245908 GJD4Q96KN9 370 aaPredicted RBP24.04■■□□□ 1.44
SH2D3A-201ENST00000245908 CCDC42Q96M95 316 aa24.04■■□□□ 1.44
SH2D3A-201ENST00000245908 MMS19Q96T76 1030 aa24.04■■□□□ 1.44
SH2D3A-201ENST00000245908 MYH4Q9Y623 1939 aa24.04■■□□□ 1.44
SH2D3A-201ENST00000245908 PPEF1O14829 653 aaPredicted RBP24.04■■□□□ 1.44
SH2D3A-201ENST00000245908 ZNF263O14978 683 aa24.04■■□□□ 1.44
SH2D3A-201ENST00000245908 EIF3JO75822 258 aaKnown RBP24.04■■□□□ 1.44
SH2D3A-201ENST00000245908 SHMT1P34896 483 aa24.04■■□□□ 1.44
SH2D3A-201ENST00000245908 CUL5Q93034 780 aa24.04■■□□□ 1.44
SH2D3A-201ENST00000245908 POLRMTO00411 1230 aaKnown RBP24.03■■□□□ 1.44
SH2D3A-201ENST00000245908 CYP27A1Q02318 531 aa24.03■■□□□ 1.44
SH2D3A-201ENST00000245908 RAD51AP2Q09MP3 1159 aa24.03■■□□□ 1.44
SH2D3A-201ENST00000245908 KIF5AQ12840 1032 aa24.03■■□□□ 1.44
SH2D3A-201ENST00000245908 GPATCH4Q5T3I0 446 aaKnown RBP24.03■■□□□ 1.44
SH2D3A-201ENST00000245908 CCDC84Q86UT8 332 aaPredicted RBP24.03■■□□□ 1.44
SH2D3A-201ENST00000245908 CERS5Q8N5B7 392 aa24.03■■□□□ 1.44
SH2D3A-201ENST00000245908 HAS1Q92839 578 aa24.03■■□□□ 1.44
SH2D3A-201ENST00000245908 SUGCTQ9HAC7 445 aa24.03■■□□□ 1.44
SH2D3A-201ENST00000245908 PDE11AQ9HCR9 933 aa24.03■■□□□ 1.44
SH2D3A-201ENST00000245908 DDX25Q9UHL0 483 aaKnown RBP24.03■■□□□ 1.44
SH2D3A-201ENST00000245908 EPHB6O15197 1021 aa24.03■■□□□ 1.44
SH2D3A-201ENST00000245908 SRGAP2O75044 1071 aa24.03■■□□□ 1.44
SH2D3A-201ENST00000245908 IDEP14735 1019 aa24.03■■□□□ 1.44
SH2D3A-201ENST00000245908 SEPT2Q15019 361 aa24.03■■□□□ 1.44
SH2D3A-201ENST00000245908 SPA17Q15506 151 aa24.03■■□□□ 1.44
SH2D3A-201ENST00000245908 TTBK2Q6IQ55 1244 aa24.03■■□□□ 1.44
SH2D3A-201ENST00000245908 MTMR8Q96EF0 704 aa24.03■■□□□ 1.44
SH2D3A-201ENST00000245908 ARFGEF1Q9Y6D6 1849 aa24.02■■□□□ 1.44
SH2D3A-201ENST00000245908 RIMBP2O15034 1052 aa24.02■■□□□ 1.44
SH2D3A-201ENST00000245908 GCFC2P16383 781 aaKnown RBP24.02■■□□□ 1.44
SH2D3A-201ENST00000245908 MRPL12P52815 198 aaKnown RBP24.02■■□□□ 1.44
SH2D3A-201ENST00000245908 CASP8Q14790 479 aa24.02■■□□□ 1.44
SH2D3A-201ENST00000245908 SECISBP2LQ93073 1101 aaKnown RBP24.02■■□□□ 1.44
SH2D3A-201ENST00000245908 USP40Q9NVE5 1235 aa24.02■■□□□ 1.44
SH2D3A-201ENST00000245908 ARHGAP20Q9P2F6 1191 aa24.02■■□□□ 1.44
SH2D3A-201ENST00000245908 DUSP10Q9Y6W6 482 aa24.02■■□□□ 1.44
SH2D3A-201ENST00000245908 SPATA31A6Q5VVP1 1343 aa24.02■■□□□ 1.44
SH2D3A-201ENST00000245908 F8W031 263 aaPredicted RBP24.01■■□□□ 1.43
SH2D3A-201ENST00000245908 LCA5LO95447 670 aa24.01■■□□□ 1.43
SH2D3A-201ENST00000245908 PLEKP08567 350 aaPredicted RBP24.01■■□□□ 1.43
SH2D3A-201ENST00000245908 ECM1Q16610 540 aa24.01■■□□□ 1.43
SH2D3A-201ENST00000245908 PROM2Q8N271 834 aa24.01■■□□□ 1.43
SH2D3A-201ENST00000245908 DNAJC19Q96DA6 116 aa24.01■■□□□ 1.43
SH2D3A-201ENST00000245908 TSG101Q99816 390 aa24.01■■□□□ 1.43
SH2D3A-201ENST00000245908 ZBTB5O15062 677 aa24.01■■□□□ 1.43
SH2D3A-201ENST00000245908 HYIQ5T013 277 aa24.01■■□□□ 1.43
SH2D3A-201ENST00000245908 ADAMTSL1Q8N6G6 1762 aa24.01■■□□□ 1.43
SH2D3A-201ENST00000245908 FAM207AQ9NSI2 230 aaPredicted RBP24.01■■□□□ 1.43
SH2D3A-201ENST00000245908 ATP6V0A2Q9Y487 856 aa24.01■■□□□ 1.43
SH2D3A-201ENST00000245908 MCM3P25205 808 aa24■■□□□ 1.43
SH2D3A-201ENST00000245908 C2CD5Q86YS7 1000 aa24■■□□□ 1.43
SH2D3A-201ENST00000245908 EXOC4Q96A65 974 aa24■■□□□ 1.43
SH2D3A-201ENST00000245908 MACROD2A1Z1Q3 448 aa24■■□□□ 1.43
SH2D3A-201ENST00000245908 TARSL2A2RTX5 802 aaKnown RBP24■■□□□ 1.43
SH2D3A-201ENST00000245908 UBAP1LF5GYI3 381 aa24■■□□□ 1.43
SH2D3A-201ENST00000245908 USO1O60763 962 aaKnown RBP24■■□□□ 1.43
SH2D3A-201ENST00000245908 COASYQ13057 564 aa24■■□□□ 1.43
SH2D3A-201ENST00000245908 ZCWPW2Q504Y3 356 aa24■■□□□ 1.43
SH2D3A-201ENST00000245908 KRT26Q7Z3Y9 468 aa24■■□□□ 1.43
SH2D3A-201ENST00000245908 MYOCDQ8IZQ8 938 aa24■■□□□ 1.43
SH2D3A-201ENST00000245908 GLIS3Q8NEA6 775 aa24■■□□□ 1.43
SH2D3A-201ENST00000245908 NAP1L4Q99733 375 aaKnown RBP24■■□□□ 1.43
SH2D3A-201ENST00000245908 TRIM34Q9BYJ4 488 aa24■■□□□ 1.43
SH2D3A-201ENST00000245908 MMRN2Q9H8L6 949 aa24■■□□□ 1.43
SH2D3A-201ENST00000245908 PSD3Q9NYI0 1048 aa24■■□□□ 1.43
SH2D3A-201ENST00000245908 ATF5Q9Y2D1 282 aaPredicted RBP24■■□□□ 1.43
SH2D3A-201ENST00000245908 ANKRD31Q8N7Z5 1873 aa24■■□□□ 1.43
SH2D3A-201ENST00000245908 USP17L10C9JJH3 530 aa23.99■■□□□ 1.43
SH2D3A-201ENST00000245908 ONECUT3O60422 494 aaPredicted RBP23.99■■□□□ 1.43
SH2D3A-201ENST00000245908 KIF11P52732 1056 aa23.99■■□□□ 1.43
SH2D3A-201ENST00000245908 CCDC96Q2M329 555 aa23.99■■□□□ 1.43
SH2D3A-201ENST00000245908 TRIM58Q8NG06 486 aa23.99■■□□□ 1.43
SH2D3A-201ENST00000245908 CAPZA3Q96KX2 299 aa23.99■■□□□ 1.43
SH2D3A-201ENST00000245908 IFIH1Q9BYX4 1025 aaKnown RBP23.99■■□□□ 1.43
SH2D3A-201ENST00000245908 EDEM3Q9BZQ6 932 aa23.99■■□□□ 1.43
SH2D3A-201ENST00000245908 SH2D4AQ9H788 454 aa23.99■■□□□ 1.43
SH2D3A-201ENST00000245908 ADAM21Q9UKJ8 722 aa23.99■■□□□ 1.43
SH2D3A-201ENST00000245908 PCDHA13Q9Y5I0 950 aa23.99■■□□□ 1.43
SH2D3A-201ENST00000245908 KDM3AQ9Y4C1 1321 aa23.99■■□□□ 1.43
SH2D3A-201ENST00000245908 LRRC41Q15345 812 aa23.99■■□□□ 1.43
SH2D3A-201ENST00000245908 BAP1Q92560 729 aa23.99■■□□□ 1.43
SH2D3A-201ENST00000245908 PSTPIP2Q9H939 334 aa23.99■■□□□ 1.43
SH2D3A-201ENST00000245908 SLC16A2P36021 539 aa23.98■■□□□ 1.43
SH2D3A-201ENST00000245908 EIF4A3P38919 411 aaKnown RBP23.98■■□□□ 1.43
SH2D3A-201ENST00000245908 SLC27A3Q5K4L6 730 aa23.98■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms