RNA–Protein interactions for RNA: ENST00000244303.10

HIF3A-202, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 2 BASIC

Gene HIF3A, Length 2,250 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-202ENST00000244303 GPS2Q13227 327 aa16■□□□□ 0.15
HIF3A-202ENST00000244303 CASP8Q14790 479 aa16■□□□□ 0.15
HIF3A-202ENST00000244303 SNX29Q8TEQ0 813 aa16■□□□□ 0.15
HIF3A-202ENST00000244303 RAD54LQ92698 747 aa16■□□□□ 0.15
HIF3A-202ENST00000244303 TRERF1Q96PN7 1200 aa16■□□□□ 0.15
HIF3A-202ENST00000244303 NDST4Q9H3R1 872 aa16■□□□□ 0.15
HIF3A-202ENST00000244303 MACROD2A1Z1Q3 448 aa15.99■□□□□ 0.15
HIF3A-202ENST00000244303 EPHB6O15197 1021 aa15.99■□□□□ 0.15
HIF3A-202ENST00000244303 MMP10P09238 476 aa15.99■□□□□ 0.15
HIF3A-202ENST00000244303 SNHG28P0DPA3 235 aa15.99■□□□□ 0.15
HIF3A-202ENST00000244303 IDEP14735 1019 aa15.99■□□□□ 0.15
HIF3A-202ENST00000244303 PDE6BP35913 854 aa15.99■□□□□ 0.15
HIF3A-202ENST00000244303 TNNI2P48788 182 aa15.99■□□□□ 0.15
HIF3A-202ENST00000244303 UBE2SQ16763 222 aa15.99■□□□□ 0.15
HIF3A-202ENST00000244303 KCNK18Q7Z418 384 aa15.99■□□□□ 0.15
HIF3A-202ENST00000244303 CCDC42Q96M95 316 aa15.99■□□□□ 0.15
HIF3A-202ENST00000244303 PURBQ96QR8 312 aaKnown RBP15.99■□□□□ 0.15
HIF3A-202ENST00000244303 RAB34Q9BZG1 259 aa15.99■□□□□ 0.15
HIF3A-202ENST00000244303 ADAM21Q9UKJ8 722 aa15.99■□□□□ 0.15
HIF3A-202ENST00000244303 SIK3Q9Y2K2 1263 aa15.99■□□□□ 0.15
HIF3A-202ENST00000244303 ADAMTSL1Q8N6G6 1762 aa15.99■□□□□ 0.15
HIF3A-202ENST00000244303 IGKV6D-41A0A0C4DH26 115 aa15.99■□□□□ 0.15
HIF3A-202ENST00000244303 EIF3JO75822 258 aaKnown RBP15.99■□□□□ 0.15
HIF3A-202ENST00000244303 VAV2P52735 878 aa15.99■□□□□ 0.15
HIF3A-202ENST00000244303 USP14P54578 494 aa15.99■□□□□ 0.15
HIF3A-202ENST00000244303 PDIA5Q14554 519 aa15.99■□□□□ 0.15
HIF3A-202ENST00000244303 KRT26Q7Z3Y9 468 aa15.99■□□□□ 0.15
HIF3A-202ENST00000244303 TXLNBQ8N3L3 684 aa15.99■□□□□ 0.15
HIF3A-202ENST00000244303 GUF1Q8N442 669 aaKnown RBP15.99■□□□□ 0.15
HIF3A-202ENST00000244303 MSL3Q8N5Y2 521 aaKnown RBP15.99■□□□□ 0.15
HIF3A-202ENST00000244303 JMJD4Q9H9V9 463 aa15.99■□□□□ 0.15
HIF3A-202ENST00000244303 DDX4Q9NQI0 724 aaKnown RBP15.99■□□□□ 0.15
HIF3A-202ENST00000244303 FAM207AQ9NSI2 230 aaPredicted RBP15.99■□□□□ 0.15
HIF3A-202ENST00000244303 EP400Q96L91 3159 aa15.99■□□□□ 0.15
HIF3A-202ENST00000244303 NRXN2Q9P2S2 1712 aa15.99■□□□□ 0.15
HIF3A-202ENST00000244303 N4BP1O75113 896 aaKnown RBP15.98■□□□□ 0.15
HIF3A-202ENST00000244303 KIF5AQ12840 1032 aa15.98■□□□□ 0.15
HIF3A-202ENST00000244303 MAN2A1Q16706 1144 aa15.98■□□□□ 0.15
HIF3A-202ENST00000244303 KRT79Q5XKE5 535 aa15.98■□□□□ 0.15
HIF3A-202ENST00000244303 ADGRF4Q8IZF3 695 aa15.98■□□□□ 0.15
HIF3A-202ENST00000244303 DDX12PQ92771 950 aa15.98■□□□□ 0.15
HIF3A-202ENST00000244303 MASTLQ96GX5 879 aa15.98■□□□□ 0.15
HIF3A-202ENST00000244303 USP40Q9NVE5 1235 aa15.98■□□□□ 0.15
HIF3A-202ENST00000244303 ARHGAP20Q9P2F6 1191 aa15.98■□□□□ 0.15
HIF3A-202ENST00000244303 PLAGL2Q9UPG8 496 aa15.98■□□□□ 0.15
HIF3A-202ENST00000244303 ZNF185O15231 689 aa15.98■□□□□ 0.15
HIF3A-202ENST00000244303 PPP1R11O60927 126 aaPredicted RBP15.98■□□□□ 0.15
HIF3A-202ENST00000244303 ERCC3P19447 782 aa15.98■□□□□ 0.15
HIF3A-202ENST00000244303 SCNN1DP51172 638 aa15.98■□□□□ 0.15
HIF3A-202ENST00000244303 SPA17Q15506 151 aa15.98■□□□□ 0.15
HIF3A-202ENST00000244303 C2CD5Q86YS7 1000 aa15.98■□□□□ 0.15
HIF3A-202ENST00000244303 GLIS3Q8NEA6 775 aa15.98■□□□□ 0.15
HIF3A-202ENST00000244303 SECISBP2LQ93073 1101 aaKnown RBP15.98■□□□□ 0.15
HIF3A-202ENST00000244303 IQCDQ96DY2 449 aa15.98■□□□□ 0.15
HIF3A-202ENST00000244303 RIC8AQ9NPQ8 531 aa15.98■□□□□ 0.15
HIF3A-202ENST00000244303 VPS18Q9P253 973 aa15.98■□□□□ 0.15
HIF3A-202ENST00000244303 QSER1Q2KHR3 1735 aa15.97■□□□□ 0.15
HIF3A-202ENST00000244303 PNMA6FA0A0J9YX94 578 aa15.97■□□□□ 0.15
HIF3A-202ENST00000244303 ANO9A1A5B4 782 aa15.97■□□□□ 0.15
HIF3A-202ENST00000244303 LRRIQ3A6PVS8 624 aaPredicted RBP15.97■□□□□ 0.15
HIF3A-202ENST00000244303 G3V3G9 751 aa15.97■□□□□ 0.15
HIF3A-202ENST00000244303 TTLL1O95922 423 aa15.97■□□□□ 0.15
HIF3A-202ENST00000244303 HNRNPH3P31942 346 aaKnown RBP15.97■□□□□ 0.15
HIF3A-202ENST00000244303 LRRC63Q05C16 580 aa15.97■□□□□ 0.15
HIF3A-202ENST00000244303 CKAP4Q07065 602 aaKnown RBP15.97■□□□□ 0.15
HIF3A-202ENST00000244303 ZNF543Q08ER8 600 aa15.97■□□□□ 0.15
HIF3A-202ENST00000244303 LRRC41Q15345 812 aa15.97■□□□□ 0.15
HIF3A-202ENST00000244303 ECM1Q16610 540 aa15.97■□□□□ 0.15
HIF3A-202ENST00000244303 CCDC96Q2M329 555 aa15.97■□□□□ 0.15
HIF3A-202ENST00000244303 TMEM119Q4V9L6 283 aa15.97■□□□□ 0.15
HIF3A-202ENST00000244303 DCAF8Q5TAQ9 597 aa15.97■□□□□ 0.15
HIF3A-202ENST00000244303 TTBK2Q6IQ55 1244 aa15.97■□□□□ 0.15
HIF3A-202ENST00000244303 FLAD1Q8NFF5 587 aa15.97■□□□□ 0.15
HIF3A-202ENST00000244303 SMCR8Q8TEV9 937 aaPredicted RBP15.97■□□□□ 0.15
HIF3A-202ENST00000244303 GJA10Q969M2 543 aa15.97■□□□□ 0.15
HIF3A-202ENST00000244303 TMX4Q9H1E5 349 aaPredicted RBP15.97■□□□□ 0.15
HIF3A-202ENST00000244303 MMRN2Q9H8L6 949 aa15.97■□□□□ 0.15
HIF3A-202ENST00000244303 CLK2P49760 499 aaKnown RBP15.97■□□□□ 0.15
HIF3A-202ENST00000244303 EHHADHQ08426 723 aa15.97■□□□□ 0.15
HIF3A-202ENST00000244303 LRRC55Q6ZSA7 311 aa15.97■□□□□ 0.15
HIF3A-202ENST00000244303 EXOC4Q96A65 974 aa15.97■□□□□ 0.15
HIF3A-202ENST00000244303 TSGA10Q9BZW7 698 aa15.97■□□□□ 0.15
HIF3A-202ENST00000244303 JADE2Q9NQC1 790 aa15.97■□□□□ 0.15
HIF3A-202ENST00000244303 ABCB11O95342 1321 aa15.96■□□□□ 0.15
HIF3A-202ENST00000244303 GREB1LQ9C091 1923 aaPredicted RBP15.96■□□□□ 0.15
HIF3A-202ENST00000244303 FGFR1OPO95684 399 aaKnown RBP15.96■□□□□ 0.15
HIF3A-202ENST00000244303 KIF11P52732 1056 aa15.96■□□□□ 0.15
HIF3A-202ENST00000244303 PPP4R3AQ6IN85 833 aa15.96■□□□□ 0.15
HIF3A-202ENST00000244303 PPP1R18Q6NYC8 613 aa15.96■□□□□ 0.15
HIF3A-202ENST00000244303 GPIHBP1Q8IV16 184 aa15.96■□□□□ 0.15
HIF3A-202ENST00000244303 CAGE1Q8TC20 777 aa15.96■□□□□ 0.15
HIF3A-202ENST00000244303 HAS1Q92839 578 aa15.96■□□□□ 0.15
HIF3A-202ENST00000244303 RPGRIP1Q96KN7 1286 aa15.96■□□□□ 0.15
HIF3A-202ENST00000244303 IFIH1Q9BYX4 1025 aaKnown RBP15.96■□□□□ 0.15
HIF3A-202ENST00000244303 DDX25Q9UHL0 483 aaKnown RBP15.96■□□□□ 0.15
HIF3A-202ENST00000244303 LRRC53A6NM62 1247 aa15.96■□□□□ 0.14
HIF3A-202ENST00000244303 PDE2AO00408 941 aaPredicted RBP15.96■□□□□ 0.14
HIF3A-202ENST00000244303 SLC16A2P36021 539 aa15.96■□□□□ 0.14
HIF3A-202ENST00000244303 ATP2B2Q01814 1243 aa15.96■□□□□ 0.14
HIF3A-202ENST00000244303 MSL1Q68DK7 614 aa15.96■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms