RNA–Protein interactions for RNA: ENST00000223641.4

SEC61B-201, Transcript of Sec61 translocon beta subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC61B, Length 545 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61B-201ENST00000223641 Q4G0T1 1027 aa15.96■□□□□ 0.15
SEC61B-201ENST00000223641 NIPA1Q7RTP0 329 aa15.96■□□□□ 0.15
SEC61B-201ENST00000223641 LENG9Q96B70 501 aa15.96■□□□□ 0.15
SEC61B-201ENST00000223641 TRIM47Q96LD4 638 aa15.96■□□□□ 0.15
SEC61B-201ENST00000223641 SCAND2PQ9GZW5 306 aaPredicted RBP15.96■□□□□ 0.15
SEC61B-201ENST00000223641 CNPY2Q9Y2B0 182 aa15.96■□□□□ 0.15
SEC61B-201ENST00000223641 UBIAD1Q9Y5Z9 338 aa15.96■□□□□ 0.15
SEC61B-201ENST00000223641 MEIS1O00470 390 aa15.95■□□□□ 0.14
SEC61B-201ENST00000223641 TNPO2O14787 897 aaKnown RBP15.95■□□□□ 0.14
SEC61B-201ENST00000223641 IGHA2P01877 340 aa15.95■□□□□ 0.14
SEC61B-201ENST00000223641 ATP2B1P20020 1258 aa15.95■□□□□ 0.14
SEC61B-201ENST00000223641 CCND2P30279 289 aa15.95■□□□□ 0.14
SEC61B-201ENST00000223641 PSMC4P43686 418 aa15.95■□□□□ 0.14
SEC61B-201ENST00000223641 ATP2C1P98194 919 aaPredicted RBP15.95■□□□□ 0.14
SEC61B-201ENST00000223641 ZNF174Q15697 407 aa15.95■□□□□ 0.14
SEC61B-201ENST00000223641 CEP55Q53EZ4 464 aa15.95■□□□□ 0.14
SEC61B-201ENST00000223641 MAMDC4Q6UXC1 1216 aa15.95■□□□□ 0.14
SEC61B-201ENST00000223641 TMEM87AQ8NBN3 555 aa15.95■□□□□ 0.14
SEC61B-201ENST00000223641 LEO1Q8WVC0 666 aaPredicted RBP15.95■□□□□ 0.14
SEC61B-201ENST00000223641 SOCS4Q8WXH5 440 aa15.95■□□□□ 0.14
SEC61B-201ENST00000223641 MTMR9Q96QG7 549 aa15.95■□□□□ 0.14
SEC61B-201ENST00000223641 NUDT12Q9BQG2 462 aa15.95■□□□□ 0.14
SEC61B-201ENST00000223641 MXRA8Q9BRK3 442 aa15.95■□□□□ 0.14
SEC61B-201ENST00000223641 ARHGAP39Q9C0H5 1083 aa15.95■□□□□ 0.14
SEC61B-201ENST00000223641 CEP131Q9UPN4 1083 aa15.95■□□□□ 0.14
SEC61B-201ENST00000223641 KIAA1217Q5T5P2 1943 aa15.95■□□□□ 0.14
SEC61B-201ENST00000223641 ELP1O95163 1332 aa15.94■□□□□ 0.14
SEC61B-201ENST00000223641 B4DLN1 442 aa15.94■□□□□ 0.14
SEC61B-201ENST00000223641 LAD1O00515 517 aa15.94■□□□□ 0.14
SEC61B-201ENST00000223641 SLC37A4O43826 429 aa15.94■□□□□ 0.14
SEC61B-201ENST00000223641 NEMFO60524 1076 aa15.94■□□□□ 0.14
SEC61B-201ENST00000223641 PPP6R2O75170 966 aa15.94■□□□□ 0.14
SEC61B-201ENST00000223641 ITGB5P18084 799 aa15.94■□□□□ 0.14
SEC61B-201ENST00000223641 MCM7P33993 719 aa15.94■□□□□ 0.14
SEC61B-201ENST00000223641 PTGDRQ13258 359 aa15.94■□□□□ 0.14
SEC61B-201ENST00000223641 DPP9Q86TI2 863 aa15.94■□□□□ 0.14
SEC61B-201ENST00000223641 MSL3Q8N5Y2 521 aaKnown RBP15.94■□□□□ 0.14
SEC61B-201ENST00000223641 JMYQ8N9B5 988 aa15.94■□□□□ 0.14
SEC61B-201ENST00000223641 NPLOC4Q8TAT6 608 aa15.94■□□□□ 0.14
SEC61B-201ENST00000223641 CYP2W1Q8TAV3 490 aa15.94■□□□□ 0.14
SEC61B-201ENST00000223641 MAML3Q96JK9 1138 aa15.94■□□□□ 0.14
SEC61B-201ENST00000223641 INPP4AQ96PE3 977 aaPredicted RBP15.94■□□□□ 0.14
SEC61B-201ENST00000223641 GBP4Q96PP9 640 aa15.94■□□□□ 0.14
SEC61B-201ENST00000223641 TMEM60Q9H2L4 133 aa15.94■□□□□ 0.14
SEC61B-201ENST00000223641 KCNMB3Q9NPA1 279 aa15.94■□□□□ 0.14
SEC61B-201ENST00000223641 SLC5A4Q9NY91 659 aa15.94■□□□□ 0.14
SEC61B-201ENST00000223641 DDX25Q9UHL0 483 aaKnown RBP15.94■□□□□ 0.14
SEC61B-201ENST00000223641 MCM3APO60318 1980 aa15.94■□□□□ 0.14
SEC61B-201ENST00000223641 CASP8AP2Q9UKL3 1982 aa15.94■□□□□ 0.14
SEC61B-201ENST00000223641 ASB14A6NK59 587 aa15.93■□□□□ 0.14
SEC61B-201ENST00000223641 TBX3O15119 743 aa15.93■□□□□ 0.14
SEC61B-201ENST00000223641 EIF3JO75822 258 aaKnown RBP15.93■□□□□ 0.14
SEC61B-201ENST00000223641 RGS20O76081 388 aa15.93■□□□□ 0.14
SEC61B-201ENST00000223641 XRCC5P13010 732 aaKnown RBP15.93■□□□□ 0.14
SEC61B-201ENST00000223641 CEBPZQ03701 1054 aaKnown RBP15.93■□□□□ 0.14
SEC61B-201ENST00000223641 KIF22Q14807 665 aa15.93■□□□□ 0.14
SEC61B-201ENST00000223641 STXBP2Q15833 593 aa15.93■□□□□ 0.14
SEC61B-201ENST00000223641 ARL6IP4Q66PJ3 421 aaKnown RBP15.93■□□□□ 0.14
SEC61B-201ENST00000223641 POTEDQ86YR6 584 aa15.93■□□□□ 0.14
SEC61B-201ENST00000223641 KCNG4Q8TDN1 519 aa15.93■□□□□ 0.14
SEC61B-201ENST00000223641 SPATA32Q96LK8 384 aa15.93■□□□□ 0.14
SEC61B-201ENST00000223641 MPHOSPH6Q99547 160 aaKnown RBP15.93■□□□□ 0.14
SEC61B-201ENST00000223641 JADE2Q9NQC1 790 aa15.93■□□□□ 0.14
SEC61B-201ENST00000223641 SPTLC2O15270 562 aa15.92■□□□□ 0.14
SEC61B-201ENST00000223641 MAFGO15525 162 aa15.92■□□□□ 0.14
SEC61B-201ENST00000223641 FIBPO43427 364 aa15.92■□□□□ 0.14
SEC61B-201ENST00000223641 FKTNO75072 461 aa15.92■□□□□ 0.14
SEC61B-201ENST00000223641 GNRH1P01148 92 aa15.92■□□□□ 0.14
SEC61B-201ENST00000223641 MYCLP12524 364 aaPredicted RBP15.92■□□□□ 0.14
SEC61B-201ENST00000223641 NCLP19338 710 aaKnown RBP15.92■□□□□ 0.14
SEC61B-201ENST00000223641 ZNF76P36508 570 aa15.92■□□□□ 0.14
SEC61B-201ENST00000223641 PRPHP41219 470 aa15.92■□□□□ 0.14
SEC61B-201ENST00000223641 RGS2P41220 211 aa15.92■□□□□ 0.14
SEC61B-201ENST00000223641 SETQ01105 290 aaPredicted RBP15.92■□□□□ 0.14
SEC61B-201ENST00000223641 STK38Q15208 465 aa15.92■□□□□ 0.14
SEC61B-201ENST00000223641 PRR16Q569H4 304 aa15.92■□□□□ 0.14
SEC61B-201ENST00000223641 ETNPPLQ8TBG4 499 aa15.92■□□□□ 0.14
SEC61B-201ENST00000223641 ZNF296Q8WUU4 475 aaPredicted RBP15.92■□□□□ 0.14
SEC61B-201ENST00000223641 HAS1Q92839 578 aa15.92■□□□□ 0.14
SEC61B-201ENST00000223641 GPRASP2Q96D09 838 aa15.92■□□□□ 0.14
SEC61B-201ENST00000223641 BEGAINQ9BUH8 593 aa15.92■□□□□ 0.14
SEC61B-201ENST00000223641 GDPD2Q9HCC8 539 aa15.92■□□□□ 0.14
SEC61B-201ENST00000223641 SRPRBQ9Y5M8 271 aaKnown RBP15.92■□□□□ 0.14
SEC61B-201ENST00000223641 MRVI1Q9Y6F6 885 aa15.92■□□□□ 0.14
SEC61B-201ENST00000223641 DDX49Q9Y6V7 483 aaKnown RBP15.92■□□□□ 0.14
SEC61B-201ENST00000223641 SYNGAP1Q96PV0 1343 aa15.92■□□□□ 0.14
SEC61B-201ENST00000223641 ICAM3P32942 547 aa15.91■□□□□ 0.14
SEC61B-201ENST00000223641 PDE4DQ08499 809 aa15.91■□□□□ 0.14
SEC61B-201ENST00000223641 IRF5Q13568 498 aa15.91■□□□□ 0.14
SEC61B-201ENST00000223641 OLFML2BQ68BL8 750 aa15.91■□□□□ 0.14
SEC61B-201ENST00000223641 PLA2G4DQ86XP0 818 aa15.91■□□□□ 0.14
SEC61B-201ENST00000223641 CD99L2Q8TCZ2 262 aa15.91■□□□□ 0.14
SEC61B-201ENST00000223641 ERO1AQ96HE7 468 aa15.91■□□□□ 0.14
SEC61B-201ENST00000223641 ZFP91Q96JP5 570 aaPredicted RBP15.91■□□□□ 0.14
SEC61B-201ENST00000223641 FAM20AQ96MK3 541 aa15.91■□□□□ 0.14
SEC61B-201ENST00000223641 APBA2Q99767 749 aa15.91■□□□□ 0.14
SEC61B-201ENST00000223641 TINF2Q9BSI4 451 aa15.91■□□□□ 0.14
SEC61B-201ENST00000223641 WDR11Q9BZH6 1224 aa15.91■□□□□ 0.14
SEC61B-201ENST00000223641 KATNBL1Q9H079 304 aa15.91■□□□□ 0.14
SEC61B-201ENST00000223641 KCNH7Q9NS40 1196 aa15.91■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 126.5 ms