RNA–Protein interactions for RNA: ENST00000223398.10

CLIP2-201, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLIP2, Length 5,563 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-201ENST00000223398 PTK2Q05397 1052 aa20.18■□□□□ 0.82
CLIP2-201ENST00000223398 SPATA1Q5VX52 437 aa20.18■□□□□ 0.82
CLIP2-201ENST00000223398 SNRNP48Q6IEG0 339 aaKnown RBP20.18■□□□□ 0.82
CLIP2-201ENST00000223398 GDAP1L1Q96MZ0 367 aa20.18■□□□□ 0.82
CLIP2-201ENST00000223398 FAM184BQ9ULE4 1060 aa20.18■□□□□ 0.82
CLIP2-201ENST00000223398 CPDO75976 1380 aa20.18■□□□□ 0.82
CLIP2-201ENST00000223398 A0A087WWV3 80 aa20.18■□□□□ 0.82
CLIP2-201ENST00000223398 DDIT3P35638 169 aa20.18■□□□□ 0.82
CLIP2-201ENST00000223398 SPON1Q9HCB6 807 aa20.18■□□□□ 0.82
CLIP2-201ENST00000223398 ANAPC4Q9UJX5 808 aa20.18■□□□□ 0.82
CLIP2-201ENST00000223398 ARHGAP31Q2M1Z3 1444 aa20.18■□□□□ 0.82
CLIP2-201ENST00000223398 NCAPD2Q15021 1401 aa20.18■□□□□ 0.82
CLIP2-201ENST00000223398 FAM186BQ8IYM0 893 aa20.18■□□□□ 0.82
CLIP2-201ENST00000223398 hCG_1984214I3L0E3 225 aa20.18■□□□□ 0.82
CLIP2-201ENST00000223398 POLR2BP30876 1174 aaKnown RBP20.18■□□□□ 0.82
CLIP2-201ENST00000223398 ZNF445P59923 1031 aa20.18■□□□□ 0.82
CLIP2-201ENST00000223398 ZNF713Q8N859 430 aaPredicted RBP20.18■□□□□ 0.82
CLIP2-201ENST00000223398 TRIML1Q8N9V2 468 aa20.18■□□□□ 0.82
CLIP2-201ENST00000223398 LRRN2O75325 713 aa20.17■□□□□ 0.82
CLIP2-201ENST00000223398 IFNAR1P17181 557 aa20.17■□□□□ 0.82
CLIP2-201ENST00000223398 BRIP1Q9BX63 1249 aa20.17■□□□□ 0.82
CLIP2-201ENST00000223398 MFAP3P55082 362 aa20.17■□□□□ 0.82
CLIP2-201ENST00000223398 PCDHB6Q9Y5E3 794 aa20.17■□□□□ 0.82
CLIP2-201ENST00000223398 GMNNO75496 209 aa20.17■□□□□ 0.82
CLIP2-201ENST00000223398 RNF8O76064 485 aa20.17■□□□□ 0.82
CLIP2-201ENST00000223398 GAP43P17677 238 aa20.17■□□□□ 0.82
CLIP2-201ENST00000223398 PSMC2P35998 433 aaKnown RBP20.17■□□□□ 0.82
CLIP2-201ENST00000223398 NBPF11Q86T75 865 aa20.17■□□□□ 0.82
CLIP2-201ENST00000223398 VPS52Q8N1B4 723 aa20.17■□□□□ 0.82
CLIP2-201ENST00000223398 MICAL1Q8TDZ2 1067 aa20.17■□□□□ 0.82
CLIP2-201ENST00000223398 TUBBP07437 444 aa20.16■□□□□ 0.82
CLIP2-201ENST00000223398 AK8Q96MA6 479 aa20.16■□□□□ 0.82
CLIP2-201ENST00000223398 RABEP2Q9H5N1 569 aa20.16■□□□□ 0.82
CLIP2-201ENST00000223398 TUBGCP2Q9BSJ2 902 aa20.16■□□□□ 0.82
CLIP2-201ENST00000223398 EXOC8Q8IYI6 725 aa20.16■□□□□ 0.82
CLIP2-201ENST00000223398 MAIP1Q8WWC4 291 aa20.16■□□□□ 0.82
CLIP2-201ENST00000223398 IQCDQ96DY2 449 aa20.16■□□□□ 0.82
CLIP2-201ENST00000223398 RMDN3Q96TC7 470 aa20.16■□□□□ 0.82
CLIP2-201ENST00000223398 ZBED2Q9BTP6 218 aa20.16■□□□□ 0.82
CLIP2-201ENST00000223398 GOLGA8IPA6NC78 632 aa20.16■□□□□ 0.82
CLIP2-201ENST00000223398 GOLGA8JA6NMD2 632 aa20.16■□□□□ 0.82
CLIP2-201ENST00000223398 SFI1A8K8P3 1242 aa20.16■□□□□ 0.82
CLIP2-201ENST00000223398 TPD52P55327 224 aaPredicted RBP20.16■□□□□ 0.82
CLIP2-201ENST00000223398 HOXC10Q9NYD6 342 aa20.16■□□□□ 0.82
CLIP2-201ENST00000223398 TSKSQ9UJT2 592 aa20.16■□□□□ 0.82
CLIP2-201ENST00000223398 ALKQ9UM73 1620 aa20.16■□□□□ 0.82
CLIP2-201ENST00000223398 CPSF1Q10570 1443 aaKnown RBP20.16■□□□□ 0.82
CLIP2-201ENST00000223398 LARGE1O95461 756 aa20.16■□□□□ 0.82
CLIP2-201ENST00000223398 INTS8Q75QN2 995 aaKnown RBP20.16■□□□□ 0.82
CLIP2-201ENST00000223398 TBC1D10CQ8IV04 446 aa20.16■□□□□ 0.82
CLIP2-201ENST00000223398 ERO1AQ96HE7 468 aa20.16■□□□□ 0.82
CLIP2-201ENST00000223398 GOLGA8SH3BPF8 625 aa20.15■□□□□ 0.82
CLIP2-201ENST00000223398 COPB1P53618 953 aaKnown RBP20.15■□□□□ 0.82
CLIP2-201ENST00000223398 TMEM47Q9BQJ4 181 aa20.15■□□□□ 0.82
CLIP2-201ENST00000223398 NEDD4P46934 1319 aa20.15■□□□□ 0.82
CLIP2-201ENST00000223398 CD58P19256 250 aa20.15■□□□□ 0.82
CLIP2-201ENST00000223398 PPP6R2O75170 966 aa20.15■□□□□ 0.82
CLIP2-201ENST00000223398 ADCY8P40145 1251 aa20.15■□□□□ 0.82
CLIP2-201ENST00000223398 HHATQ5VTY9 493 aa20.15■□□□□ 0.82
CLIP2-201ENST00000223398 SCARA5Q6ZMJ2 495 aa20.15■□□□□ 0.82
CLIP2-201ENST00000223398 PALM2Q8IXS6 379 aa20.15■□□□□ 0.82
CLIP2-201ENST00000223398 ADCY10Q96PN6 1610 aa20.15■□□□□ 0.82
CLIP2-201ENST00000223398 USP17L10C9JJH3 530 aa20.15■□□□□ 0.82
CLIP2-201ENST00000223398 PLA2G4BP0C869 781 aa20.15■□□□□ 0.82
CLIP2-201ENST00000223398 PHLDB2Q86SQ0 1253 aa20.15■□□□□ 0.82
CLIP2-201ENST00000223398 A6NJR5 290 aa20.14■□□□□ 0.82
CLIP2-201ENST00000223398 KRIT1O00522 736 aa20.14■□□□□ 0.82
CLIP2-201ENST00000223398 H2AFZP0C0S5 128 aa20.14■□□□□ 0.82
CLIP2-201ENST00000223398 RC3H1Q5TC82 1133 aaKnown RBP20.14■□□□□ 0.82
CLIP2-201ENST00000223398 H2AFVQ71UI9 128 aa20.14■□□□□ 0.82
CLIP2-201ENST00000223398 MIS12Q9H081 205 aa20.14■□□□□ 0.82
CLIP2-201ENST00000223398 MAGEF1Q9HAY2 307 aa20.14■□□□□ 0.82
CLIP2-201ENST00000223398 PLCG1P19174 1290 aa20.14■□□□□ 0.81
CLIP2-201ENST00000223398 NAA35Q5VZE5 725 aa20.14■□□□□ 0.81
CLIP2-201ENST00000223398 TAOK1Q7L7X3 1001 aa20.14■□□□□ 0.81
CLIP2-201ENST00000223398 CCDC51Q96ER9 411 aa20.14■□□□□ 0.81
CLIP2-201ENST00000223398 ABCC12Q96J65 1359 aa20.14■□□□□ 0.81
CLIP2-201ENST00000223398 USP17L15C9J2P7 530 aa20.14■□□□□ 0.81
CLIP2-201ENST00000223398 USP17L13C9JLJ4 530 aa20.14■□□□□ 0.81
CLIP2-201ENST00000223398 USP17L11C9JVI0 530 aa20.14■□□□□ 0.81
CLIP2-201ENST00000223398 USP17L18D6R9N7 530 aa20.14■□□□□ 0.81
CLIP2-201ENST00000223398 USP17L22D6RA61 530 aa20.14■□□□□ 0.81
CLIP2-201ENST00000223398 USP17L17D6RBQ6 530 aa20.14■□□□□ 0.81
CLIP2-201ENST00000223398 USP17L19D6RCP7 530 aa20.14■□□□□ 0.81
CLIP2-201ENST00000223398 USP17L20D6RJB6 530 aa20.14■□□□□ 0.81
CLIP2-201ENST00000223398 USP17L24Q0WX57 530 aa20.14■□□□□ 0.81
CLIP2-201ENST00000223398 USP17L6PQ6QN14 398 aa20.14■□□□□ 0.81
CLIP2-201ENST00000223398 SLC17A8Q8NDX2 589 aa20.14■□□□□ 0.81
CLIP2-201ENST00000223398 PIGOQ8TEQ8 1089 aa20.14■□□□□ 0.81
CLIP2-201ENST00000223398 DCAF4Q8WV16 495 aa20.14■□□□□ 0.81
CLIP2-201ENST00000223398 CUEDC2Q9H467 287 aa20.14■□□□□ 0.81
CLIP2-201ENST00000223398 KIF9Q9HAQ2 790 aa20.14■□□□□ 0.81
CLIP2-201ENST00000223398 MROH7-TTC4A0A0A0MT08 1334 aa20.14■□□□□ 0.81
CLIP2-201ENST00000223398 LGSNQ5TDP6 509 aa20.14■□□□□ 0.81
CLIP2-201ENST00000223398 APOBEC3FQ8IUX4 373 aaKnown RBP20.14■□□□□ 0.81
CLIP2-201ENST00000223398 RYBPQ8N488 228 aaPredicted RBP20.14■□□□□ 0.81
CLIP2-201ENST00000223398 NBPF26B4DH59 902 aa20.13■□□□□ 0.81
CLIP2-201ENST00000223398 ATXN8OSP0DMR3 200 aa20.13■□□□□ 0.81
CLIP2-201ENST00000223398 SAT1P21673 171 aa20.13■□□□□ 0.81
CLIP2-201ENST00000223398 MESDQ14696 234 aa20.13■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms