RNA–Protein interactions for RNA: ENST00000222402.7

UBE2D4-201, Transcript of ubiquitin conjugating enzyme E2 D4 (putative), humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE2D4, Length 3,974 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4-201ENST00000222402 RIC8AQ9NPQ8 531 aa16.53■□□□□ 0.24
UBE2D4-201ENST00000222402 RSPH14Q9UHP6 348 aa16.53■□□□□ 0.24
UBE2D4-201ENST00000222402 FAN1Q9Y2M0 1017 aa16.53■□□□□ 0.24
UBE2D4-201ENST00000222402 GDF11O95390 407 aa16.53■□□□□ 0.24
UBE2D4-201ENST00000222402 TBC1D8O95759 1140 aa16.53■□□□□ 0.24
UBE2D4-201ENST00000222402 C2orf54Q08AI8 447 aa16.53■□□□□ 0.24
UBE2D4-201ENST00000222402 PRPF4BQ13523 1007 aaKnown RBP16.53■□□□□ 0.24
UBE2D4-201ENST00000222402 NAALADL2Q58DX5 795 aa16.53■□□□□ 0.24
UBE2D4-201ENST00000222402 KANSL2Q9H9L4 492 aa16.53■□□□□ 0.24
UBE2D4-201ENST00000222402 COL4A3BPQ9Y5P4 624 aa16.53■□□□□ 0.24
UBE2D4-201ENST00000222402 E9PMD0 336 aa16.53■□□□□ 0.24
UBE2D4-201ENST00000222402 CFBP00751 764 aa16.53■□□□□ 0.24
UBE2D4-201ENST00000222402 LRRC63Q05C16 580 aa16.53■□□□□ 0.24
UBE2D4-201ENST00000222402 PTPROQ16827 1216 aa16.53■□□□□ 0.24
UBE2D4-201ENST00000222402 SPICE1Q8N0Z3 855 aa16.53■□□□□ 0.24
UBE2D4-201ENST00000222402 SUGCTQ9HAC7 445 aa16.53■□□□□ 0.24
UBE2D4-201ENST00000222402 PCDHA13Q9Y5I0 950 aa16.53■□□□□ 0.24
UBE2D4-201ENST00000222402 MYH7P12883 1935 aa16.53■□□□□ 0.24
UBE2D4-201ENST00000222402 AKAP11Q9UKA4 1901 aa16.53■□□□□ 0.24
UBE2D4-201ENST00000222402 PVALEFA0A1B0GWK0 134 aa16.53■□□□□ 0.24
UBE2D4-201ENST00000222402 HSF2BPO75031 334 aa16.53■□□□□ 0.24
UBE2D4-201ENST00000222402 ALDH1B1P30837 517 aa16.53■□□□□ 0.24
UBE2D4-201ENST00000222402 PLS1Q14651 629 aa16.53■□□□□ 0.24
UBE2D4-201ENST00000222402 ZSCAN26Q16670 478 aa16.53■□□□□ 0.24
UBE2D4-201ENST00000222402 CCDC17Q96LX7 622 aa16.53■□□□□ 0.24
UBE2D4-201ENST00000222402 SAMM50Q9Y512 469 aa16.53■□□□□ 0.24
UBE2D4-201ENST00000222402 NUP98P52948 1817 aa16.52■□□□□ 0.24
UBE2D4-201ENST00000222402 LRRC10BA6NIK2 292 aa16.52■□□□□ 0.24
UBE2D4-201ENST00000222402 GCNT3O95395 438 aa16.52■□□□□ 0.24
UBE2D4-201ENST00000222402 POLLQ9UGP5 575 aa16.52■□□□□ 0.24
UBE2D4-201ENST00000222402 HYOU1Q9Y4L1 999 aa16.52■□□□□ 0.24
UBE2D4-201ENST00000222402 LRRC53A6NM62 1247 aa16.52■□□□□ 0.23
UBE2D4-201ENST00000222402 RNF225M0QZC1 329 aaPredicted RBP16.52■□□□□ 0.23
UBE2D4-201ENST00000222402 ZBTB5O15062 677 aa16.52■□□□□ 0.23
UBE2D4-201ENST00000222402 SLC37A4O43826 429 aa16.52■□□□□ 0.23
UBE2D4-201ENST00000222402 PLA2G4BP0C869 781 aa16.52■□□□□ 0.23
UBE2D4-201ENST00000222402 GCFC2P16383 781 aaKnown RBP16.52■□□□□ 0.23
UBE2D4-201ENST00000222402 GUF1Q8N442 669 aaKnown RBP16.52■□□□□ 0.23
UBE2D4-201ENST00000222402 MLXIPQ9HAP2 919 aa16.52■□□□□ 0.23
UBE2D4-201ENST00000222402 PCDHB13Q9Y5F0 798 aa16.52■□□□□ 0.23
UBE2D4-201ENST00000222402 ADRA2BP18089 450 aa16.52■□□□□ 0.23
UBE2D4-201ENST00000222402 RPL13P26373 211 aaKnown RBP16.52■□□□□ 0.23
UBE2D4-201ENST00000222402 USP8P40818 1118 aa16.52■□□□□ 0.23
UBE2D4-201ENST00000222402 RBM26Q5T8P6 1007 aaKnown RBP16.52■□□□□ 0.23
UBE2D4-201ENST00000222402 RSRC2Q7L4I2 434 aaKnown RBP16.52■□□□□ 0.23
UBE2D4-201ENST00000222402 FBXO11Q86XK2 927 aa16.52■□□□□ 0.23
UBE2D4-201ENST00000222402 POLD4Q9HCU8 107 aa16.52■□□□□ 0.23
UBE2D4-201ENST00000222402 PKD2L1Q9P0L9 805 aa16.52■□□□□ 0.23
UBE2D4-201ENST00000222402 STRCP1A6NGW2 1772 aa16.52■□□□□ 0.23
UBE2D4-201ENST00000222402 NWD2Q9ULI1 1742 aa16.52■□□□□ 0.23
UBE2D4-201ENST00000222402 POTEB3A0JP26 581 aa16.51■□□□□ 0.23
UBE2D4-201ENST00000222402 POTECB2RU33 542 aa16.51■□□□□ 0.23
UBE2D4-201ENST00000222402 ABL1P00519 1130 aa16.51■□□□□ 0.23
UBE2D4-201ENST00000222402 POTEBQ6S5H4 581 aa16.51■□□□□ 0.23
UBE2D4-201ENST00000222402 VEZTQ9HBM0 779 aa16.51■□□□□ 0.23
UBE2D4-201ENST00000222402 ARMCX3Q9UH62 379 aaPredicted RBP16.51■□□□□ 0.23
UBE2D4-201ENST00000222402 ADAM21Q9UKJ8 722 aa16.51■□□□□ 0.23
UBE2D4-201ENST00000222402 NR2F2P24468 414 aa16.51■□□□□ 0.23
UBE2D4-201ENST00000222402 AFAP1L1Q8TED9 768 aa16.51■□□□□ 0.23
UBE2D4-201ENST00000222402 ANKS1AQ92625 1134 aa16.51■□□□□ 0.23
UBE2D4-201ENST00000222402 PNKPQ96T60 521 aa16.51■□□□□ 0.23
UBE2D4-201ENST00000222402 GOLGA6BA6NDN3 693 aa16.51■□□□□ 0.23
UBE2D4-201ENST00000222402 EIF3CLB5ME19 914 aaKnown RBP16.51■□□□□ 0.23
UBE2D4-201ENST00000222402 EPB41P11171 864 aaKnown RBP16.51■□□□□ 0.23
UBE2D4-201ENST00000222402 TCP1P17987 556 aaKnown RBP16.51■□□□□ 0.23
UBE2D4-201ENST00000222402 ZNF543Q08ER8 600 aa16.51■□□□□ 0.23
UBE2D4-201ENST00000222402 COASYQ13057 564 aa16.51■□□□□ 0.23
UBE2D4-201ENST00000222402 CDC37Q16543 378 aaPredicted RBP16.51■□□□□ 0.23
UBE2D4-201ENST00000222402 KIAA0753Q2KHM9 967 aa16.51■□□□□ 0.23
UBE2D4-201ENST00000222402 HS2ST1Q7LGA3 356 aa16.51■□□□□ 0.23
UBE2D4-201ENST00000222402 MAATS1Q7Z4T9 603 aa16.51■□□□□ 0.23
UBE2D4-201ENST00000222402 MMS19Q96T76 1030 aa16.51■□□□□ 0.23
UBE2D4-201ENST00000222402 EIF3CQ99613 913 aaKnown RBP16.51■□□□□ 0.23
UBE2D4-201ENST00000222402 EMILIN3Q9NT22 766 aa16.51■□□□□ 0.23
UBE2D4-201ENST00000222402 BAZ2AQ9UIF9 1905 aaKnown RBP16.5■□□□□ 0.23
UBE2D4-201ENST00000222402 PBX1P40424 430 aa16.5■□□□□ 0.23
UBE2D4-201ENST00000222402 IFI16Q16666 785 aaKnown RBP16.5■□□□□ 0.23
UBE2D4-201ENST00000222402 C4orf32Q8N8J7 132 aa16.5■□□□□ 0.23
UBE2D4-201ENST00000222402 AMNQ9BXJ7 453 aa16.5■□□□□ 0.23
UBE2D4-201ENST00000222402 ANO3Q9BYT9 981 aa16.5■□□□□ 0.23
UBE2D4-201ENST00000222402 JRKLQ9Y4A0 524 aa16.5■□□□□ 0.23
UBE2D4-201ENST00000222402 ZNF185O15231 689 aa16.5■□□□□ 0.23
UBE2D4-201ENST00000222402 GNA14O95837 355 aa16.5■□□□□ 0.23
UBE2D4-201ENST00000222402 PSMD2Q13200 908 aa16.5■□□□□ 0.23
UBE2D4-201ENST00000222402 ODF2Q5BJF6 829 aa16.5■□□□□ 0.23
UBE2D4-201ENST00000222402 NUCKS1Q9H1E3 243 aaKnown RBP16.5■□□□□ 0.23
UBE2D4-201ENST00000222402 PRDM4Q9UKN5 801 aa16.5■□□□□ 0.23
UBE2D4-201ENST00000222402 MAPK8IP2Q13387 824 aaPredicted RBP16.5■□□□□ 0.23
UBE2D4-201ENST00000222402 CFAP221Q4G0U5 840 aa16.5■□□□□ 0.23
UBE2D4-201ENST00000222402 TPH2Q8IWU9 490 aa16.5■□□□□ 0.23
UBE2D4-201ENST00000222402 GSPT2Q8IYD1 628 aaKnown RBP16.5■□□□□ 0.23
UBE2D4-201ENST00000222402 SLFN12Q8IYM2 578 aa16.5■□□□□ 0.23
UBE2D4-201ENST00000222402 DUSP10Q9Y6W6 482 aa16.5■□□□□ 0.23
UBE2D4-201ENST00000222402 SEMA3FQ13275 785 aa16.49■□□□□ 0.23
UBE2D4-201ENST00000222402 GRB10Q13322 594 aa16.49■□□□□ 0.23
UBE2D4-201ENST00000222402 QRICH1Q2TAL8 776 aa16.49■□□□□ 0.23
UBE2D4-201ENST00000222402 STXBP4Q6ZWJ1 553 aa16.49■□□□□ 0.23
UBE2D4-201ENST00000222402 APTXQ7Z2E3 356 aaKnown RBP16.49■□□□□ 0.23
UBE2D4-201ENST00000222402 TBC1D5Q92609 795 aa16.49■□□□□ 0.23
UBE2D4-201ENST00000222402 LACRTQ9GZZ8 138 aa16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms