RNA–Protein interactions for RNA: ENST00000221232.9

CNOT3-201, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNOT3, Length 2,852 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-201ENST00000221232 TRIM37O94972 964 aa16.26■□□□□ 0.19
CNOT3-201ENST00000221232 EIF4A3P38919 411 aaKnown RBP16.26■□□□□ 0.19
CNOT3-201ENST00000221232 STAT3P40763 770 aa16.26■□□□□ 0.19
CNOT3-201ENST00000221232 ARID5AQ03989 594 aa16.26■□□□□ 0.19
CNOT3-201ENST00000221232 SPA17Q15506 151 aa16.26■□□□□ 0.19
CNOT3-201ENST00000221232 CENPPQ6IPU0 288 aa16.26■□□□□ 0.19
CNOT3-201ENST00000221232 C15orf52Q6ZUT6 534 aaKnown RBP16.26■□□□□ 0.19
CNOT3-201ENST00000221232 HDXQ7Z353 690 aa16.26■□□□□ 0.19
CNOT3-201ENST00000221232 TRAPPC11Q7Z392 1133 aa16.26■□□□□ 0.19
CNOT3-201ENST00000221232 RAD54LQ92698 747 aa16.26■□□□□ 0.19
CNOT3-201ENST00000221232 PSTPIP2Q9H939 334 aa16.26■□□□□ 0.19
CNOT3-201ENST00000221232 MYO1AQ9UBC5 1043 aa16.26■□□□□ 0.19
CNOT3-201ENST00000221232 GAKO14976 1311 aa16.26■□□□□ 0.19
CNOT3-201ENST00000221232 ERLIN1O75477 346 aa16.26■□□□□ 0.19
CNOT3-201ENST00000221232 MOCS3O95396 460 aa16.26■□□□□ 0.19
CNOT3-201ENST00000221232 LMAN1P49257 510 aa16.26■□□□□ 0.19
CNOT3-201ENST00000221232 ZNF543Q08ER8 600 aa16.26■□□□□ 0.19
CNOT3-201ENST00000221232 KIF5AQ12840 1032 aa16.26■□□□□ 0.19
CNOT3-201ENST00000221232 UNC13DQ70J99 1090 aa16.26■□□□□ 0.19
CNOT3-201ENST00000221232 MSANTD4Q8NCY6 345 aa16.26■□□□□ 0.19
CNOT3-201ENST00000221232 FAM163AQ96GL9 167 aaPredicted RBP16.26■□□□□ 0.19
CNOT3-201ENST00000221232 NUP58Q9BVL2 599 aa16.26■□□□□ 0.19
CNOT3-201ENST00000221232 DBNDD1Q9H9R9 158 aa16.26■□□□□ 0.19
CNOT3-201ENST00000221232 ARHGAP20Q9P2F6 1191 aa16.26■□□□□ 0.19
CNOT3-201ENST00000221232 PCDHA12Q9UN75 941 aa16.26■□□□□ 0.19
CNOT3-201ENST00000221232 L1RE1Q9UN81 338 aa16.26■□□□□ 0.19
CNOT3-201ENST00000221232 KIAA1024Q9UPX6 916 aa16.26■□□□□ 0.19
CNOT3-201ENST00000221232 PDE2AO00408 941 aaPredicted RBP16.25■□□□□ 0.19
CNOT3-201ENST00000221232 TRAF5O00463 557 aa16.25■□□□□ 0.19
CNOT3-201ENST00000221232 AKR1B10O60218 316 aa16.25■□□□□ 0.19
CNOT3-201ENST00000221232 C2orf54Q08AI8 447 aa16.25■□□□□ 0.19
CNOT3-201ENST00000221232 MEA1Q16626 185 aa16.25■□□□□ 0.19
CNOT3-201ENST00000221232 KIAA0825Q8IV33 1275 aa16.25■□□□□ 0.19
CNOT3-201ENST00000221232 HAS1Q92839 578 aa16.25■□□□□ 0.19
CNOT3-201ENST00000221232 ZFP91Q96JP5 570 aaPredicted RBP16.25■□□□□ 0.19
CNOT3-201ENST00000221232 UBXN6Q9BZV1 441 aa16.25■□□□□ 0.19
CNOT3-201ENST00000221232 PLEKHA4Q9H4M7 779 aa16.25■□□□□ 0.19
CNOT3-201ENST00000221232 PNMA6FA0A0J9YX94 578 aa16.25■□□□□ 0.19
CNOT3-201ENST00000221232 LRRC53A6NM62 1247 aa16.25■□□□□ 0.19
CNOT3-201ENST00000221232 PSMD14O00487 310 aa16.25■□□□□ 0.19
CNOT3-201ENST00000221232 NAP1L1P55209 391 aaKnown RBP16.25■□□□□ 0.19
CNOT3-201ENST00000221232 CASP8Q14790 479 aa16.25■□□□□ 0.19
CNOT3-201ENST00000221232 ASPRV1Q53RT3 343 aa16.25■□□□□ 0.19
CNOT3-201ENST00000221232 CDC42EP5Q6NZY7 148 aa16.25■□□□□ 0.19
CNOT3-201ENST00000221232 CERKQ8TCT0 537 aa16.25■□□□□ 0.19
CNOT3-201ENST00000221232 MAGEF1Q9HAY2 307 aa16.25■□□□□ 0.19
CNOT3-201ENST00000221232 EHD2Q9NZN4 543 aa16.25■□□□□ 0.19
CNOT3-201ENST00000221232 ADAM21Q9UKJ8 722 aa16.25■□□□□ 0.19
CNOT3-201ENST00000221232 RAB21Q9UL25 225 aa16.25■□□□□ 0.19
CNOT3-201ENST00000221232 FAM170AA1A519 330 aa16.24■□□□□ 0.19
CNOT3-201ENST00000221232 LRRIQ3A6PVS8 624 aaPredicted RBP16.24■□□□□ 0.19
CNOT3-201ENST00000221232 MAP2K7O14733 419 aa16.24■□□□□ 0.19
CNOT3-201ENST00000221232 SHMT1P34896 483 aa16.24■□□□□ 0.19
CNOT3-201ENST00000221232 HNRNPH2P55795 449 aaKnown RBP16.24■□□□□ 0.19
CNOT3-201ENST00000221232 GABPAQ06546 454 aa16.24■□□□□ 0.19
CNOT3-201ENST00000221232 TMC4Q7Z404 712 aa16.24■□□□□ 0.19
CNOT3-201ENST00000221232 SRCAPQ6ZRS2 3230 aa16.24■□□□□ 0.19
CNOT3-201ENST00000221232 BTAF1O14981 1849 aa16.24■□□□□ 0.19
CNOT3-201ENST00000221232 CACNA2D4Q7Z3S7 1137 aa16.24■□□□□ 0.19
CNOT3-201ENST00000221232 IFIH1Q9BYX4 1025 aaKnown RBP16.24■□□□□ 0.19
CNOT3-201ENST00000221232 RAB34Q9BZG1 259 aa16.24■□□□□ 0.19
CNOT3-201ENST00000221232 CAPN6Q9Y6Q1 641 aa16.24■□□□□ 0.19
CNOT3-201ENST00000221232 MEIS1O00470 390 aa16.24■□□□□ 0.19
CNOT3-201ENST00000221232 NCK2O43639 380 aa16.24■□□□□ 0.19
CNOT3-201ENST00000221232 BUB1O43683 1085 aa16.24■□□□□ 0.19
CNOT3-201ENST00000221232 FXR2P51116 673 aaKnown RBP eCLIP16.24■□□□□ 0.19
CNOT3-201ENST00000221232 FAM193AP78312 1265 aa16.24■□□□□ 0.19
CNOT3-201ENST00000221232 TUBB2AQ13885 445 aa16.24■□□□□ 0.19
CNOT3-201ENST00000221232 SAMD1Q6SPF0 538 aaPredicted RBP16.24■□□□□ 0.19
CNOT3-201ENST00000221232 CUL5Q93034 780 aa16.24■□□□□ 0.19
CNOT3-201ENST00000221232 SECISBP2LQ93073 1101 aaKnown RBP16.24■□□□□ 0.19
CNOT3-201ENST00000221232 TUBB2BQ9BVA1 445 aa16.24■□□□□ 0.19
CNOT3-201ENST00000221232 PANK4Q9NVE7 773 aa16.24■□□□□ 0.19
CNOT3-201ENST00000221232 FAN1Q9Y2M0 1017 aa16.24■□□□□ 0.19
CNOT3-201ENST00000221232 PCDHA13Q9Y5I0 950 aa16.24■□□□□ 0.19
CNOT3-201ENST00000221232 POTEB3A0JP26 581 aa16.23■□□□□ 0.19
CNOT3-201ENST00000221232 POTECB2RU33 542 aa16.23■□□□□ 0.19
CNOT3-201ENST00000221232 EIF3CLB5ME19 914 aaKnown RBP16.23■□□□□ 0.19
CNOT3-201ENST00000221232 GFPT1Q06210 699 aaPredicted RBP16.23■□□□□ 0.19
CNOT3-201ENST00000221232 IKQ13123 557 aaPredicted RBP16.23■□□□□ 0.19
CNOT3-201ENST00000221232 SKIDA1Q1XH10 827 aa16.23■□□□□ 0.19
CNOT3-201ENST00000221232 USH1GQ495M9 461 aa16.23■□□□□ 0.19
CNOT3-201ENST00000221232 CCDC40Q4G0X9 1142 aa16.23■□□□□ 0.19
CNOT3-201ENST00000221232 TDRD12Q587J7 1177 aaKnown RBP16.23■□□□□ 0.19
CNOT3-201ENST00000221232 POTEBQ6S5H4 581 aa16.23■□□□□ 0.19
CNOT3-201ENST00000221232 ERGIC2Q96RQ1 377 aa16.23■□□□□ 0.19
CNOT3-201ENST00000221232 EIF3CQ99613 913 aaKnown RBP16.23■□□□□ 0.19
CNOT3-201ENST00000221232 RIC8AQ9NPQ8 531 aa16.23■□□□□ 0.19
CNOT3-201ENST00000221232 POTEB2H3BUK9 544 aa16.23■□□□□ 0.19
CNOT3-201ENST00000221232 POLRMTO00411 1230 aaKnown RBP16.23■□□□□ 0.19
CNOT3-201ENST00000221232 KIF11P52732 1056 aa16.23■□□□□ 0.19
CNOT3-201ENST00000221232 SLC30A10Q6XR72 485 aa16.23■□□□□ 0.19
CNOT3-201ENST00000221232 CERS3Q8IU89 383 aa16.23■□□□□ 0.19
CNOT3-201ENST00000221232 SIK3Q9Y2K2 1263 aa16.23■□□□□ 0.19
CNOT3-201ENST00000221232 ESYT2A0FGR8 921 aa16.22■□□□□ 0.19
CNOT3-201ENST00000221232 MRPL12P52815 198 aaKnown RBP16.22■□□□□ 0.19
CNOT3-201ENST00000221232 RASSF7Q02833 373 aa16.22■□□□□ 0.19
CNOT3-201ENST00000221232 COASYQ13057 564 aa16.22■□□□□ 0.19
CNOT3-201ENST00000221232 EZH2Q15910 746 aaKnown RBP16.22■□□□□ 0.19
CNOT3-201ENST00000221232 HERC4Q5GLZ8 1057 aaPredicted RBP16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms