RNA–Protein interactions for RNA: ENST00000219689.11

USP31-201, Transcript of ubiquitin specific peptidase 31, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP31, Length 10,699 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP31-201ENST00000219689 TEKT2Q9UIF3 430 aa11.98□□□□□ -0.49
USP31-201ENST00000219689 NESP48681 1621 aa11.98□□□□□ -0.49
USP31-201ENST00000219689 GNA11P29992 359 aa11.98□□□□□ -0.49
USP31-201ENST00000219689 YWHAGP61981 247 aaKnown RBP eCLIP11.98□□□□□ -0.49
USP31-201ENST00000219689 HDAC11Q96DB2 347 aa11.98□□□□□ -0.49
USP31-201ENST00000219689 MYL10Q9BUA6 226 aa11.98□□□□□ -0.49
USP31-201ENST00000219689 ANKRD2Q9GZV1 360 aa11.98□□□□□ -0.49
USP31-201ENST00000219689 RNPEPQ9H4A4 650 aa11.98□□□□□ -0.49
USP31-201ENST00000219689 FIS1Q9Y3D6 152 aa11.98□□□□□ -0.49
USP31-201ENST00000219689 PDHBP11177 359 aa11.98□□□□□ -0.49
USP31-201ENST00000219689 CCND1P24385 295 aa11.98□□□□□ -0.49
USP31-201ENST00000219689 ASPHQ12797 758 aa11.98□□□□□ -0.49
USP31-201ENST00000219689 NEK9Q8TD19 979 aa11.98□□□□□ -0.49
USP31-201ENST00000219689 SNX29Q8TEQ0 813 aa11.98□□□□□ -0.49
USP31-201ENST00000219689 MAGEB6P1A0A0J9YX57 407 aa11.97□□□□□ -0.49
USP31-201ENST00000219689 E9PMD0 336 aa11.97□□□□□ -0.49
USP31-201ENST00000219689 TXKP42681 527 aa11.97□□□□□ -0.49
USP31-201ENST00000219689 HDAC4P56524 1084 aa11.97□□□□□ -0.49
USP31-201ENST00000219689 SLC8A3P57103 927 aa11.97□□□□□ -0.49
USP31-201ENST00000219689 NME9Q86XW9 330 aa11.97□□□□□ -0.49
USP31-201ENST00000219689 TMEM87AQ8NBN3 555 aa11.97□□□□□ -0.49
USP31-201ENST00000219689 DNAJC9Q8WXX5 260 aa11.97□□□□□ -0.49
USP31-201ENST00000219689 MAN1B1Q9UKM7 699 aa11.97□□□□□ -0.49
USP31-201ENST00000219689 CAB39Q9Y376 341 aaPredicted RBP11.97□□□□□ -0.49
USP31-201ENST00000219689 CALCRLQ16602 461 aa11.97□□□□□ -0.49
USP31-201ENST00000219689 POMGNT1Q8WZA1 660 aa11.97□□□□□ -0.49
USP31-201ENST00000219689 SEC16BQ96JE7 1060 aa11.97□□□□□ -0.49
USP31-201ENST00000219689 N4BP1O75113 896 aaKnown RBP11.97□□□□□ -0.49
USP31-201ENST00000219689 CMA1P23946 247 aa11.97□□□□□ -0.49
USP31-201ENST00000219689 CRLF3Q8IUI8 442 aa11.97□□□□□ -0.49
USP31-201ENST00000219689 JPH4Q96JJ6 628 aa11.97□□□□□ -0.49
USP31-201ENST00000219689 ATP6V1G3Q96LB4 118 aa11.97□□□□□ -0.49
USP31-201ENST00000219689 BRD8Q9H0E9 1235 aa11.97□□□□□ -0.49
USP31-201ENST00000219689 NOD2Q9HC29 1040 aa11.97□□□□□ -0.49
USP31-201ENST00000219689 RAB20Q9NX57 234 aa11.97□□□□□ -0.49
USP31-201ENST00000219689 STX18Q9P2W9 335 aaKnown RBP11.97□□□□□ -0.49
USP31-201ENST00000219689 GNA14O95837 355 aa11.97□□□□□ -0.49
USP31-201ENST00000219689 ECE1P42892 770 aa11.97□□□□□ -0.49
USP31-201ENST00000219689 NANOGNBQ7Z5D8 188 aa11.97□□□□□ -0.49
USP31-201ENST00000219689 PBKQ96KB5 322 aa11.97□□□□□ -0.49
USP31-201ENST00000219689 ANP32DO95626 131 aa11.97□□□□□ -0.49
USP31-201ENST00000219689 SH2D3CQ8N5H7 860 aa11.97□□□□□ -0.49
USP31-201ENST00000219689 PAPOLBQ9NRJ5 636 aaKnown RBP11.97□□□□□ -0.49
USP31-201ENST00000219689 MAP4P27816 1152 aaKnown RBP11.97□□□□□ -0.49
USP31-201ENST00000219689 MDH1BQ5I0G3 518 aa11.97□□□□□ -0.49
USP31-201ENST00000219689 CHMP6Q96FZ7 201 aa11.97□□□□□ -0.49
USP31-201ENST00000219689 CLMNQ96JQ2 1002 aa11.97□□□□□ -0.49
USP31-201ENST00000219689 HIC2Q96JB3 615 aa11.97□□□□□ -0.49
USP31-201ENST00000219689 EPRSP07814 1512 aaKnown RBP11.97□□□□□ -0.49
USP31-201ENST00000219689 STAT1P42224 750 aa11.96□□□□□ -0.49
USP31-201ENST00000219689 KRT40Q6A162 431 aa11.96□□□□□ -0.49
USP31-201ENST00000219689 SFI1A8K8P3 1242 aa11.96□□□□□ -0.49
USP31-201ENST00000219689 H7C1D1 291 aa11.96□□□□□ -0.49
USP31-201ENST00000219689 NDUFA10O95299 355 aa11.96□□□□□ -0.49
USP31-201ENST00000219689 LSP1P33241 339 aa11.96□□□□□ -0.49
USP31-201ENST00000219689 DR1Q01658 176 aa11.96□□□□□ -0.49
USP31-201ENST00000219689 TBL3Q12788 808 aaKnown RBP11.96□□□□□ -0.49
USP31-201ENST00000219689 CYFIP2Q96F07 1278 aa11.96□□□□□ -0.49
USP31-201ENST00000219689 TMEM165Q9HC07 324 aa11.96□□□□□ -0.49
USP31-201ENST00000219689 PPP1R1BQ9UD71 204 aaPredicted RBP11.96□□□□□ -0.49
USP31-201ENST00000219689 FBLN1P23142 703 aa11.96□□□□□ -0.49
USP31-201ENST00000219689 PACS2Q86VP3 889 aa11.96□□□□□ -0.49
USP31-201ENST00000219689 OMA1Q96E52 524 aa11.96□□□□□ -0.49
USP31-201ENST00000219689 GPR101Q96P66 508 aaPredicted RBP11.96□□□□□ -0.49
USP31-201ENST00000219689 IQSEC3Q9UPP2 1182 aaPredicted RBP11.96□□□□□ -0.49
USP31-201ENST00000219689 TRPC6Q9Y210 931 aa11.96□□□□□ -0.49
USP31-201ENST00000219689 ATP11BQ9Y2G3 1177 aa11.96□□□□□ -0.49
USP31-201ENST00000219689 NSD2O96028 1365 aa11.96□□□□□ -0.49
USP31-201ENST00000219689 TRIM37O94972 964 aa11.96□□□□□ -0.49
USP31-201ENST00000219689 FOXD4Q12950 439 aaPredicted RBP11.96□□□□□ -0.49
USP31-201ENST00000219689 RARS2Q5T160 578 aaKnown RBP11.96□□□□□ -0.49
USP31-201ENST00000219689 MAEAQ7L5Y9 396 aa11.96□□□□□ -0.49
USP31-201ENST00000219689 ADCK1Q86TW2 530 aa11.96□□□□□ -0.49
USP31-201ENST00000219689 SERPINB10P48595 397 aa11.96□□□□□ -0.49
USP31-201ENST00000219689 RAPH1Q70E73 1250 aa11.96□□□□□ -0.49
USP31-201ENST00000219689 NOP56O00567 594 aaKnown RBP11.96□□□□□ -0.5
USP31-201ENST00000219689 MRPS35P82673 323 aaKnown RBP11.96□□□□□ -0.5
USP31-201ENST00000219689 MESDQ14696 234 aa11.96□□□□□ -0.5
USP31-201ENST00000219689 LDHAL6AQ6ZMR3 332 aa11.96□□□□□ -0.5
USP31-201ENST00000219689 FAM133AQ8N9E0 248 aa11.96□□□□□ -0.5
USP31-201ENST00000219689 TRIM15Q9C019 465 aa11.96□□□□□ -0.5
USP31-201ENST00000219689 CCDC90BQ9GZT6 254 aa11.96□□□□□ -0.5
USP31-201ENST00000219689 MCM8Q9UJA3 840 aa11.96□□□□□ -0.5
USP31-201ENST00000219689 SEC16AO15027 2179 aa11.96□□□□□ -0.5
USP31-201ENST00000219689 IGF2BP3O00425 579 aaKnown RBP eCLIP11.96□□□□□ -0.5
USP31-201ENST00000219689 SLC26A7Q8TE54 656 aa11.96□□□□□ -0.5
USP31-201ENST00000219689 PSPC1Q8WXF1 523 aaKnown RBP11.96□□□□□ -0.5
USP31-201ENST00000219689 PAWRQ96IZ0 340 aaKnown RBP11.96□□□□□ -0.5
USP31-201ENST00000219689 POLD4Q9HCU8 107 aa11.96□□□□□ -0.5
USP31-201ENST00000219689 TRMT112Q9UI30 125 aaKnown RBP11.96□□□□□ -0.5
USP31-201ENST00000219689 LSM1O15116 133 aaKnown RBP11.95□□□□□ -0.5
USP31-201ENST00000219689 SEC24DO94855 1032 aaPredicted RBP11.95□□□□□ -0.5
USP31-201ENST00000219689 HLA-DOAP06340 250 aa11.95□□□□□ -0.5
USP31-201ENST00000219689 DAB2IPQ5VWQ8 1189 aa11.95□□□□□ -0.5
USP31-201ENST00000219689 MIGA1Q8NAN2 632 aa11.95□□□□□ -0.5
USP31-201ENST00000219689 BBOF1Q8ND07 529 aa11.95□□□□□ -0.5
USP31-201ENST00000219689 MT-ND3P03897 115 aa11.95□□□□□ -0.5
USP31-201ENST00000219689 SLC12A1Q13621 1099 aa11.95□□□□□ -0.5
USP31-201ENST00000219689 TLK2Q86UE8 772 aa11.95□□□□□ -0.5
USP31-201ENST00000219689 DACH2Q96NX9 599 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms