RNA–Protein interactions for RNA: ENST00000216727.8

PABPN1-201, Transcript of poly(A) binding protein nuclear 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PABPN1, Length 2,001 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-201ENST00000216727 TEPSINQ96N21 525 aa33.22■■■□□ 2.91
PABPN1-201ENST00000216727 SGIP1Q9BQI5 828 aa33.22■■■□□ 2.91
PABPN1-201ENST00000216727 FEM1BQ9UK73 627 aa33.22■■■□□ 2.91
PABPN1-201ENST00000216727 PAXBP1Q9Y5B6 917 aa33.22■■■□□ 2.91
PABPN1-201ENST00000216727 KIF2AO00139 706 aaPredicted RBP33.21■■■□□ 2.91
PABPN1-201ENST00000216727 N4BP3O15049 544 aa33.21■■■□□ 2.91
PABPN1-201ENST00000216727 GTF2F1P35269 517 aaKnown RBP eCLIP33.21■■■□□ 2.911e-11■■■■■ 33.7
PABPN1-201ENST00000216727 P2RX5Q93086 422 aa33.21■■■□□ 2.91
PABPN1-201ENST00000216727 LENG9Q96B70 501 aa33.21■■■□□ 2.91
PABPN1-201ENST00000216727 BAG1Q99933 345 aaPredicted RBP33.21■■■□□ 2.91
PABPN1-201ENST00000216727 FRMD4AQ9P2Q2 1039 aaPredicted RBP33.21■■■□□ 2.91
PABPN1-201ENST00000216727 PPP1R13BQ96KQ4 1090 aa33.21■■■□□ 2.91
PABPN1-201ENST00000216727 TRIM47Q96LD4 638 aa33.21■■■□□ 2.91
PABPN1-201ENST00000216727 BCS1LQ9Y276 419 aa33.21■■■□□ 2.91
PABPN1-201ENST00000216727 FCER1AP12319 257 aa33.2■■■□□ 2.91
PABPN1-201ENST00000216727 CCT6AP40227 531 aaKnown RBP33.2■■■□□ 2.91
PABPN1-201ENST00000216727 PRR16Q569H4 304 aa33.2■■■□□ 2.91
PABPN1-201ENST00000216727 CEP135Q66GS9 1140 aa33.2■■■□□ 2.91
PABPN1-201ENST00000216727 FAM20AQ96MK3 541 aa33.2■■■□□ 2.91
PABPN1-201ENST00000216727 PANX2Q96RD6 677 aa33.2■■■□□ 2.91
PABPN1-201ENST00000216727 AKR1B15C9JRZ8 316 aaPredicted RBP33.19■■■□□ 2.9
PABPN1-201ENST00000216727 TAL1P17542 331 aaPredicted RBP33.19■■■□□ 2.9
PABPN1-201ENST00000216727 ADKP55263 362 aaKnown RBP33.19■■■□□ 2.9
PABPN1-201ENST00000216727 KIAA0895Q8NCT3 520 aa33.19■■■□□ 2.9
PABPN1-201ENST00000216727 GINM1Q9NU53 330 aa33.19■■■□□ 2.9
PABPN1-201ENST00000216727 DYNC1I1O14576 645 aa33.19■■■□□ 2.9
PABPN1-201ENST00000216727 HOXA13P31271 388 aaPredicted RBP33.19■■■□□ 2.9
PABPN1-201ENST00000216727 PPFIBP1Q86W92 1011 aa33.19■■■□□ 2.9
PABPN1-201ENST00000216727 KIFC2Q96AC6 838 aa33.19■■■□□ 2.9
PABPN1-201ENST00000216727 DUSP9Q99956 384 aaKnown RBP33.19■■■□□ 2.9
PABPN1-201ENST00000216727 FAM86B1E9PN63 330 aa33.18■■■□□ 2.9
PABPN1-201ENST00000216727 EGFRP00533 1210 aa33.18■■■□□ 2.9
PABPN1-201ENST00000216727 FAM86B2P0C5J1 330 aa33.18■■■□□ 2.9
PABPN1-201ENST00000216727 SPIRE1Q08AE8 756 aa33.18■■■□□ 2.9
PABPN1-201ENST00000216727 DDX12PQ92771 950 aa33.18■■■□□ 2.9
PABPN1-201ENST00000216727 SRRTQ9BXP5 876 aaKnown RBP33.18■■■□□ 2.9
PABPN1-201ENST00000216727 GLIS2Q9BZE0 524 aaPredicted RBP33.18■■■□□ 2.9
PABPN1-201ENST00000216727 EHHADHQ08426 723 aa33.18■■■□□ 2.9
PABPN1-201ENST00000216727 PSMD2Q13200 908 aa33.18■■■□□ 2.9
PABPN1-201ENST00000216727 VPS16Q9H269 839 aa33.18■■■□□ 2.9
PABPN1-201ENST00000216727 TAB2Q9NYJ8 693 aa33.18■■■□□ 2.9
PABPN1-201ENST00000216727 STK24Q9Y6E0 443 aa33.18■■■□□ 2.9
PABPN1-201ENST00000216727 FZD9O00144 591 aa33.17■■■□□ 2.9
PABPN1-201ENST00000216727 ZYXQ15942 572 aaKnown RBP33.17■■■□□ 2.9
PABPN1-201ENST00000216727 HAUS3Q68CZ6 603 aa33.17■■■□□ 2.9
PABPN1-201ENST00000216727 ZBTB4Q9P1Z0 1013 aaPredicted RBP33.17■■■□□ 2.9
PABPN1-201ENST00000216727 MRPL11Q9Y3B7 192 aaKnown RBP33.17■■■□□ 2.9
PABPN1-201ENST00000216727 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP33.17■■■□□ 2.98e-11■■■□□ 16.3
PABPN1-201ENST00000216727 TUBB4AP04350 444 aa33.16■■■□□ 2.9
PABPN1-201ENST00000216727 DYMQ7RTS9 669 aa33.16■■■□□ 2.9
PABPN1-201ENST00000216727 CSGALNACT2Q8N6G5 542 aa33.16■■■□□ 2.9
PABPN1-201ENST00000216727 ATAD5Q96QE3 1844 aa33.16■■■□□ 2.9
PABPN1-201ENST00000216727 SMCHD1A6NHR9 2005 aa33.16■■■□□ 2.9
PABPN1-201ENST00000216727 GMPSP49915 693 aaPredicted RBP33.16■■■□□ 2.9
PABPN1-201ENST00000216727 RBL2Q08999 1139 aa33.16■■■□□ 2.9
PABPN1-201ENST00000216727 CCDC174Q6PII3 467 aa33.16■■■□□ 2.9
PABPN1-201ENST00000216727 MICALL2Q8IY33 904 aa33.16■■■□□ 2.9
PABPN1-201ENST00000216727 GCOM1H8Y6P7 765 aaPredicted RBP33.15■■■□□ 2.9
PABPN1-201ENST00000216727 POLR2MP0CAP2 368 aa33.15■■■□□ 2.9
PABPN1-201ENST00000216727 ANKRD40Q6AI12 368 aa33.15■■■□□ 2.9
PABPN1-201ENST00000216727 CENPPQ6IPU0 288 aa33.15■■■□□ 2.9
PABPN1-201ENST00000216727 MAGEC2Q9UBF1 373 aaPredicted RBP33.15■■■□□ 2.9
PABPN1-201ENST00000216727 KIAA1024Q9UPX6 916 aa33.15■■■□□ 2.9
PABPN1-201ENST00000216727 RIOK3O14730 519 aaKnown RBP33.14■■■□□ 2.9
PABPN1-201ENST00000216727 PTGER2P43116 358 aa33.14■■■□□ 2.9
PABPN1-201ENST00000216727 R3HDM1Q15032 1099 aaKnown RBP33.14■■■□□ 2.9
PABPN1-201ENST00000216727 GUF1Q8N442 669 aaKnown RBP33.14■■■□□ 2.9
PABPN1-201ENST00000216727 DNAJC19Q96DA6 116 aa33.14■■■□□ 2.9
PABPN1-201ENST00000216727 CCDC51Q96ER9 411 aa33.14■■■□□ 2.9
PABPN1-201ENST00000216727 ZNF341Q9BYN7 854 aa33.14■■■□□ 2.9
PABPN1-201ENST00000216727 SLC39A2Q9NP94 309 aa33.14■■■□□ 2.9
PABPN1-201ENST00000216727 ABCB11O95342 1321 aa33.14■■■□□ 2.9
PABPN1-201ENST00000216727 TRIM14Q14142 442 aa33.14■■■□□ 2.9
PABPN1-201ENST00000216727 CNGA4Q8IV77 575 aa33.14■■■□□ 2.9
PABPN1-201ENST00000216727 FAM114A1Q8IWE2 563 aa33.14■■■□□ 2.9
PABPN1-201ENST00000216727 ERMNQ8TAM6 284 aa33.14■■■□□ 2.9
PABPN1-201ENST00000216727 NAA15Q9BXJ9 866 aaKnown RBP33.14■■■□□ 2.9
PABPN1-201ENST00000216727 BMP2KQ9NSY1 1161 aaPredicted RBP33.14■■■□□ 2.9
PABPN1-201ENST00000216727 CFBP00751 764 aa33.13■■■□□ 2.89
PABPN1-201ENST00000216727 LPAR1Q92633 364 aa33.13■■■□□ 2.89
PABPN1-201ENST00000216727 HPS3Q969F9 1004 aa33.13■■■□□ 2.89
PABPN1-201ENST00000216727 FEZ1Q99689 392 aa33.13■■■□□ 2.89
PABPN1-201ENST00000216727 DEFB129Q9H1M3 183 aa33.13■■■□□ 2.89
PABPN1-201ENST00000216727 LGALS16A8MUM7 142 aa33.12■■■□□ 2.89
PABPN1-201ENST00000216727 MSH4O15457 936 aa33.12■■■□□ 2.89
PABPN1-201ENST00000216727 ZSCAN12O43309 604 aa33.12■■■□□ 2.89
PABPN1-201ENST00000216727 MFAP3LO75121 409 aa33.12■■■□□ 2.89
PABPN1-201ENST00000216727 GYPCP04921 128 aa33.12■■■□□ 2.89
PABPN1-201ENST00000216727 CNOT7Q9UIV1 285 aaKnown RBP33.12■■■□□ 2.89
PABPN1-201ENST00000216727 POTEB3A0JP26 581 aa33.12■■■□□ 2.89
PABPN1-201ENST00000216727 POTECB2RU33 542 aa33.12■■■□□ 2.89
PABPN1-201ENST00000216727 CTNND1O60716 968 aaKnown RBP33.12■■■□□ 2.89
PABPN1-201ENST00000216727 TPM1P09493 284 aa33.12■■■□□ 2.89
PABPN1-201ENST00000216727 STAT3P40763 770 aa33.12■■■□□ 2.89
PABPN1-201ENST00000216727 RASSF7Q02833 373 aa33.12■■■□□ 2.89
PABPN1-201ENST00000216727 FOXR2Q6PJQ5 311 aa33.12■■■□□ 2.89
PABPN1-201ENST00000216727 POTEBQ6S5H4 581 aa33.12■■■□□ 2.89
PABPN1-201ENST00000216727 CCDC84Q86UT8 332 aaPredicted RBP33.12■■■□□ 2.89
PABPN1-201ENST00000216727 FBXO28Q9NVF7 368 aa33.12■■■□□ 2.89
PABPN1-201ENST00000216727 SCAF8Q9UPN6 1271 aaKnown RBP33.12■■■□□ 2.89
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms