RNA–Protein interactions for RNA: ENST00000216639.7

VRK1-201, Transcript of vaccinia related kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VRK1, Length 1,745 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-201ENST00000216639 LDHDQ86WU2 507 aa19.48■□□□□ 0.71
VRK1-201ENST00000216639 ETNPPLQ8TBG4 499 aa19.48■□□□□ 0.71
VRK1-201ENST00000216639 FBXO28Q9NVF7 368 aa19.48■□□□□ 0.71
VRK1-201ENST00000216639 GPRC5DQ9NZD1 345 aa19.48■□□□□ 0.71
VRK1-201ENST00000216639 PNMA2Q9UL42 364 aa19.48■□□□□ 0.71
VRK1-201ENST00000216639 PPP2R3BQ9Y5P8 575 aa19.48■□□□□ 0.71
VRK1-201ENST00000216639 BICDL2A1A5D9 508 aa19.48■□□□□ 0.71
VRK1-201ENST00000216639 ICAM1P05362 532 aa19.48■□□□□ 0.71
VRK1-201ENST00000216639 TAL1P17542 331 aaPredicted RBP19.48■□□□□ 0.71
VRK1-201ENST00000216639 CCZ1BP86790 482 aa19.48■□□□□ 0.71
VRK1-201ENST00000216639 CCZ1P86791 482 aaPredicted RBP19.48■□□□□ 0.71
VRK1-201ENST00000216639 NR1I3Q14994 352 aa19.48■□□□□ 0.71
VRK1-201ENST00000216639 SPECC1LQ69YQ0 1117 aa19.48■□□□□ 0.71
VRK1-201ENST00000216639 UNC13DQ70J99 1090 aa19.48■□□□□ 0.71
VRK1-201ENST00000216639 CCDC112Q8NEF3 446 aa19.48■□□□□ 0.71
VRK1-201ENST00000216639 NOC3LQ8WTT2 800 aaKnown RBP19.48■□□□□ 0.71
VRK1-201ENST00000216639 NUDT12Q9BQG2 462 aa19.48■□□□□ 0.71
VRK1-201ENST00000216639 BMP2KQ9NSY1 1161 aaPredicted RBP19.48■□□□□ 0.71
VRK1-201ENST00000216639 INTS13Q9NVM9 706 aa19.48■□□□□ 0.71
VRK1-201ENST00000216639 MAPK8IP1Q9UQF2 711 aa19.48■□□□□ 0.71
VRK1-201ENST00000216639 COBLL1Q53SF7 1204 aa19.47■□□□□ 0.71
VRK1-201ENST00000216639 ARMCX5Q6P1M9 558 aa19.47■□□□□ 0.71
VRK1-201ENST00000216639 SCYL3Q8IZE3 742 aa19.47■□□□□ 0.71
VRK1-201ENST00000216639 CCPG1Q9ULG6 757 aa19.47■□□□□ 0.71
VRK1-201ENST00000216639 RABGAP1Q9Y3P9 1069 aa19.47■□□□□ 0.71
VRK1-201ENST00000216639 MYMKA6NI61 221 aa19.46■□□□□ 0.71
VRK1-201ENST00000216639 FAM86B1E9PN63 330 aa19.46■□□□□ 0.71
VRK1-201ENST00000216639 FAM86B2P0C5J1 330 aa19.46■□□□□ 0.71
VRK1-201ENST00000216639 INPP5BP32019 993 aa19.46■□□□□ 0.71
VRK1-201ENST00000216639 GJA10Q969M2 543 aa19.46■□□□□ 0.71
VRK1-201ENST00000216639 LENG9Q96B70 501 aa19.46■□□□□ 0.71
VRK1-201ENST00000216639 PICK1Q9NRD5 415 aa19.46■□□□□ 0.71
VRK1-201ENST00000216639 ZNF112Q9UJU3 913 aa19.46■□□□□ 0.71
VRK1-201ENST00000216639 PSMD2Q13200 908 aa19.45■□□□□ 0.7
VRK1-201ENST00000216639 MCF2L2Q86YR7 1114 aa19.45■□□□□ 0.7
VRK1-201ENST00000216639 WDR18Q9BV38 432 aa19.45■□□□□ 0.7
VRK1-201ENST00000216639 TANGO6Q9C0B7 1094 aa19.45■□□□□ 0.7
VRK1-201ENST00000216639 ADD3Q9UEY8 706 aaKnown RBP19.45■□□□□ 0.7
VRK1-201ENST00000216639 LIMA1Q9UHB6 759 aaKnown RBP19.45■□□□□ 0.7
VRK1-201ENST00000216639 CTDP1Q9Y5B0 961 aaPredicted RBP19.45■□□□□ 0.7
VRK1-201ENST00000216639 KCNJ18B7U540 433 aa19.45■□□□□ 0.7
VRK1-201ENST00000216639 FDX1P10109 184 aa19.45■□□□□ 0.7
VRK1-201ENST00000216639 MTMR2Q13614 643 aa19.45■□□□□ 0.7
VRK1-201ENST00000216639 KCNJ12Q14500 433 aa19.45■□□□□ 0.7
VRK1-201ENST00000216639 APTXQ7Z2E3 356 aaKnown RBP19.45■□□□□ 0.7
VRK1-201ENST00000216639 TRIM47Q96LD4 638 aa19.45■□□□□ 0.7
VRK1-201ENST00000216639 THAP9Q9H5L6 903 aa19.45■□□□□ 0.7
VRK1-201ENST00000216639 KIAA1024Q9UPX6 916 aa19.45■□□□□ 0.7
VRK1-201ENST00000216639 DOCK1Q14185 1865 aa19.44■□□□□ 0.7
VRK1-201ENST00000216639 LRRC10BA6NIK2 292 aa19.44■□□□□ 0.7
VRK1-201ENST00000216639 MSH4O15457 936 aa19.44■□□□□ 0.7
VRK1-201ENST00000216639 CCNE1P24864 410 aa19.44■□□□□ 0.7
VRK1-201ENST00000216639 KCNJ6P48051 423 aa19.44■□□□□ 0.7
VRK1-201ENST00000216639 TCP11X2Q5H9J9 407 aa19.44■□□□□ 0.7
VRK1-201ENST00000216639 NCAPH2Q6IBW4 605 aa19.44■□□□□ 0.7
VRK1-201ENST00000216639 TRPM4Q8TD43 1214 aa19.44■□□□□ 0.7
VRK1-201ENST00000216639 DDX12PQ92771 950 aa19.44■□□□□ 0.7
VRK1-201ENST00000216639 P2RX5Q93086 422 aa19.44■□□□□ 0.7
VRK1-201ENST00000216639 WRNIP1Q96S55 665 aa19.44■□□□□ 0.7
VRK1-201ENST00000216639 MAGEC2Q9UBF1 373 aaPredicted RBP19.44■□□□□ 0.7
VRK1-201ENST00000216639 DICER1Q9UPY3 1922 aaKnown RBP19.44■□□□□ 0.7
VRK1-201ENST00000216639 FLOT1O75955 427 aa19.43■□□□□ 0.7
VRK1-201ENST00000216639 EEF1GP26641 437 aaKnown RBP19.43■□□□□ 0.7
VRK1-201ENST00000216639 TERF1P54274 439 aa19.43■□□□□ 0.7
VRK1-201ENST00000216639 SPIRE1Q08AE8 756 aa19.43■□□□□ 0.7
VRK1-201ENST00000216639 STK4Q13043 487 aa19.43■□□□□ 0.7
VRK1-201ENST00000216639 TBX2Q13207 712 aaPredicted RBP19.43■□□□□ 0.7
VRK1-201ENST00000216639 ECM1Q16610 540 aa19.43■□□□□ 0.7
VRK1-201ENST00000216639 DYMQ7RTS9 669 aa19.43■□□□□ 0.7
VRK1-201ENST00000216639 KCNK18Q7Z418 384 aa19.43■□□□□ 0.7
VRK1-201ENST00000216639 KCTD17Q8N5Z5 321 aa19.43■□□□□ 0.7
VRK1-201ENST00000216639 SAMD3Q8N6K7 520 aa19.43■□□□□ 0.7
VRK1-201ENST00000216639 TBC1D5Q92609 795 aa19.43■□□□□ 0.7
VRK1-201ENST00000216639 AGBL1Q96MI9 1066 aa19.43■□□□□ 0.7
VRK1-201ENST00000216639 GGA3Q9NZ52 723 aa19.43■□□□□ 0.7
VRK1-201ENST00000216639 R3HCC1Q9Y3T6 440 aaKnown RBP19.43■□□□□ 0.7
VRK1-201ENST00000216639 N4BP3O15049 544 aa19.42■□□□□ 0.7
VRK1-201ENST00000216639 COBLO75128 1261 aa19.42■□□□□ 0.7
VRK1-201ENST00000216639 ZBED4O75132 1171 aa19.42■□□□□ 0.7
VRK1-201ENST00000216639 IDEP14735 1019 aa19.42■□□□□ 0.7
VRK1-201ENST00000216639 VCAM1P19320 739 aa19.42■□□□□ 0.7
VRK1-201ENST00000216639 STAT3P40763 770 aa19.42■□□□□ 0.7
VRK1-201ENST00000216639 HSD17B4P51659 736 aa19.42■□□□□ 0.7
VRK1-201ENST00000216639 SETQ01105 290 aaPredicted RBP19.42■□□□□ 0.7
VRK1-201ENST00000216639 SPP2Q13103 211 aa19.42■□□□□ 0.7
VRK1-201ENST00000216639 KRT31Q15323 416 aa19.42■□□□□ 0.7
VRK1-201ENST00000216639 SUPT20HL1Q3ZLR7 823 aa19.42■□□□□ 0.7
VRK1-201ENST00000216639 FAM114A1Q8IWE2 563 aa19.42■□□□□ 0.7
VRK1-201ENST00000216639 ZNF280CQ8ND82 737 aa19.42■□□□□ 0.7
VRK1-201ENST00000216639 UIMC1Q96RL1 719 aa19.42■□□□□ 0.7
VRK1-201ENST00000216639 SLC38A10Q9HBR0 1119 aa19.42■□□□□ 0.7
VRK1-201ENST00000216639 KCND1Q9NSA2 647 aa19.42■□□□□ 0.7
VRK1-201ENST00000216639 EMILIN3Q9NT22 766 aa19.42■□□□□ 0.7
VRK1-201ENST00000216639 MAP3K20Q9NYL2 800 aaKnown RBP19.42■□□□□ 0.7
VRK1-201ENST00000216639 PPP1R9AQ9ULJ8 1098 aa19.42■□□□□ 0.7
VRK1-201ENST00000216639 ZNF536O15090 1300 aa19.42■□□□□ 0.7
VRK1-201ENST00000216639 IGLV3-22A0A075B6J6 115 aa19.42■□□□□ 0.7
VRK1-201ENST00000216639 POTEB3A0JP26 581 aa19.42■□□□□ 0.7
VRK1-201ENST00000216639 TRIM49BA6NDI0 452 aa19.42■□□□□ 0.7
VRK1-201ENST00000216639 POTECB2RU33 542 aa19.42■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms