RNA–Protein interactions for RNA: ENST00000216099.12

APOBEC3D-201, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3D, humanhuman

APPRIS P1 TSL 2 BASIC

Gene APOBEC3D, Length 2,528 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3D-201ENST00000216099 INTUQ9ULD6 942 aa11.94□□□□□ -0.5
APOBEC3D-201ENST00000216099 MYH7BA7E2Y1 1941 aa11.94□□□□□ -0.5
APOBEC3D-201ENST00000216099 VWA3AA6NCI4 1184 aa11.93□□□□□ -0.5
APOBEC3D-201ENST00000216099 CBFA2T2O43439 604 aa11.93□□□□□ -0.5
APOBEC3D-201ENST00000216099 GOLGA8HP0CJ92 632 aa11.93□□□□□ -0.5
APOBEC3D-201ENST00000216099 MCM7P33993 719 aa11.93□□□□□ -0.5
APOBEC3D-201ENST00000216099 ZNF76P36508 570 aa11.93□□□□□ -0.5
APOBEC3D-201ENST00000216099 CDKN1CP49918 316 aaPredicted RBP11.93□□□□□ -0.5
APOBEC3D-201ENST00000216099 NAPAP54920 295 aa11.93□□□□□ -0.5
APOBEC3D-201ENST00000216099 NCOA4Q13772 614 aa11.93□□□□□ -0.5
APOBEC3D-201ENST00000216099 DHX58Q96C10 678 aa11.93□□□□□ -0.5
APOBEC3D-201ENST00000216099 PAGE5Q96GU1 130 aa11.93□□□□□ -0.5
APOBEC3D-201ENST00000216099 PURBQ96QR8 312 aaKnown RBP11.93□□□□□ -0.5
APOBEC3D-201ENST00000216099 SOCS7O14512 581 aa11.93□□□□□ -0.5
APOBEC3D-201ENST00000216099 MAPK8P45983 427 aa11.93□□□□□ -0.5
APOBEC3D-201ENST00000216099 FOXK1P85037 733 aa11.93□□□□□ -0.5
APOBEC3D-201ENST00000216099 DPYDQ12882 1025 aa11.93□□□□□ -0.5
APOBEC3D-201ENST00000216099 EZH2Q15910 746 aaKnown RBP11.93□□□□□ -0.5
APOBEC3D-201ENST00000216099 IL17AQ16552 155 aa11.93□□□□□ -0.5
APOBEC3D-201ENST00000216099 IQUBQ8NA54 791 aa11.93□□□□□ -0.5
APOBEC3D-201ENST00000216099 C1orf131Q8NDD1 294 aaKnown RBP11.93□□□□□ -0.5
APOBEC3D-201ENST00000216099 ENOX1Q8TC92 643 aaKnown RBP11.93□□□□□ -0.5
APOBEC3D-201ENST00000216099 GTF3C2Q8WUA4 911 aaPredicted RBP11.93□□□□□ -0.5
APOBEC3D-201ENST00000216099 GSDMAQ96QA5 445 aa11.93□□□□□ -0.5
APOBEC3D-201ENST00000216099 DYTNA2CJ06 578 aa11.92□□□□□ -0.5
APOBEC3D-201ENST00000216099 MAP3K13O43283 966 aa11.92□□□□□ -0.5
APOBEC3D-201ENST00000216099 KIF20AO95235 890 aa11.92□□□□□ -0.5
APOBEC3D-201ENST00000216099 CHRNA5P30532 468 aa11.92□□□□□ -0.5
APOBEC3D-201ENST00000216099 ZNF543Q08ER8 600 aa11.92□□□□□ -0.5
APOBEC3D-201ENST00000216099 SOGA3Q5TF21 947 aa11.92□□□□□ -0.5
APOBEC3D-201ENST00000216099 ISM2Q6H9L7 571 aa11.92□□□□□ -0.5
APOBEC3D-201ENST00000216099 LRRC8AQ8IWT6 810 aa11.92□□□□□ -0.5
APOBEC3D-201ENST00000216099 PDILTQ8N807 584 aa11.92□□□□□ -0.5
APOBEC3D-201ENST00000216099 CACTINQ8WUQ7 758 aaKnown RBP11.92□□□□□ -0.5
APOBEC3D-201ENST00000216099 GTPBP4Q9BZE4 634 aaKnown RBP11.92□□□□□ -0.5
APOBEC3D-201ENST00000216099 XPO4Q9C0E2 1151 aaKnown RBP11.92□□□□□ -0.5
APOBEC3D-201ENST00000216099 IFNKQ9P0W0 207 aa11.92□□□□□ -0.5
APOBEC3D-201ENST00000216099 RGS17Q9UGC6 210 aaPredicted RBP11.92□□□□□ -0.5
APOBEC3D-201ENST00000216099 ATRNL1Q5VV63 1379 aa11.92□□□□□ -0.5
APOBEC3D-201ENST00000216099 BRCA1P38398 1863 aaKnown RBP11.92□□□□□ -0.5
APOBEC3D-201ENST00000216099 FAM163BP0C2L3 166 aa11.92□□□□□ -0.5
APOBEC3D-201ENST00000216099 SKIP12755 728 aa11.92□□□□□ -0.5
APOBEC3D-201ENST00000216099 TXLNAP40222 546 aa11.92□□□□□ -0.5
APOBEC3D-201ENST00000216099 NONOQ15233 471 aaKnown RBP eCLIP11.92□□□□□ -0.5
APOBEC3D-201ENST00000216099 NBPF20Q3BBV1 942 aa11.92□□□□□ -0.5
APOBEC3D-201ENST00000216099 GPATCH4Q5T3I0 446 aaKnown RBP11.92□□□□□ -0.5
APOBEC3D-201ENST00000216099 PDXDC2PQ6P474 469 aa11.92□□□□□ -0.5
APOBEC3D-201ENST00000216099 SMCO2A6NFE2 343 aa11.91□□□□□ -0.5
APOBEC3D-201ENST00000216099 FAM196BA6NMK8 535 aa11.91□□□□□ -0.5
APOBEC3D-201ENST00000216099 ARMCX6Q7L4S7 300 aa11.91□□□□□ -0.5
APOBEC3D-201ENST00000216099 RASGRP2Q7LDG7 609 aa11.91□□□□□ -0.5
APOBEC3D-201ENST00000216099 CCDC150Q8NCX0 1101 aa11.91□□□□□ -0.5
APOBEC3D-201ENST00000216099 RASGRP4Q8TDF6 673 aa11.91□□□□□ -0.5
APOBEC3D-201ENST00000216099 SCYL1Q96KG9 808 aa11.91□□□□□ -0.5
APOBEC3D-201ENST00000216099 PIGSQ96S52 555 aa11.91□□□□□ -0.5
APOBEC3D-201ENST00000216099 KCNQ5Q9NR82 932 aa11.91□□□□□ -0.5
APOBEC3D-201ENST00000216099 PI4KBQ9UBF8 816 aa11.91□□□□□ -0.5
APOBEC3D-201ENST00000216099 FAM198AQ9UFP1 575 aa11.91□□□□□ -0.5
APOBEC3D-201ENST00000216099 NFIAQ12857 509 aa11.91□□□□□ -0.5
APOBEC3D-201ENST00000216099 DTHD1Q6ZMT9 781 aa11.91□□□□□ -0.5
APOBEC3D-201ENST00000216099 GRAMD1CQ8IYS0 662 aa11.91□□□□□ -0.5
APOBEC3D-201ENST00000216099 LRRC47Q8N1G4 583 aaKnown RBP11.91□□□□□ -0.5
APOBEC3D-201ENST00000216099 MKL1Q969V6 931 aa11.91□□□□□ -0.5
APOBEC3D-201ENST00000216099 INO80BQ9C086 356 aaPredicted RBP11.91□□□□□ -0.5
APOBEC3D-201ENST00000216099 BRINP2Q9C0B6 783 aa11.91□□□□□ -0.5
APOBEC3D-201ENST00000216099 CCSER1Q9C0I3 900 aa11.91□□□□□ -0.5
APOBEC3D-201ENST00000216099 KCND1Q9NSA2 647 aa11.91□□□□□ -0.5
APOBEC3D-201ENST00000216099 FAM221BA6H8Z2 402 aa11.9□□□□□ -0.5
APOBEC3D-201ENST00000216099 ENTPD3O75355 529 aa11.9□□□□□ -0.5
APOBEC3D-201ENST00000216099 ZNF18P17022 549 aa11.9□□□□□ -0.5
APOBEC3D-201ENST00000216099 EN1Q05925 392 aaPredicted RBP11.9□□□□□ -0.5
APOBEC3D-201ENST00000216099 LRMPQ12912 555 aa11.9□□□□□ -0.5
APOBEC3D-201ENST00000216099 NR6A1Q15406 480 aa11.9□□□□□ -0.5
APOBEC3D-201ENST00000216099 OCLNQ16625 522 aa11.9□□□□□ -0.5
APOBEC3D-201ENST00000216099 INF2Q27J81 1249 aa11.9□□□□□ -0.5
APOBEC3D-201ENST00000216099 DPY19L2Q6NUT2 758 aa11.9□□□□□ -0.5
APOBEC3D-201ENST00000216099 POTEAQ6S8J7 498 aa11.9□□□□□ -0.5
APOBEC3D-201ENST00000216099 KIAA0825Q8IV33 1275 aa11.9□□□□□ -0.5
APOBEC3D-201ENST00000216099 MTMR8Q96EF0 704 aa11.9□□□□□ -0.5
APOBEC3D-201ENST00000216099 AK8Q96MA6 479 aa11.9□□□□□ -0.5
APOBEC3D-201ENST00000216099 NYAP2Q9P242 653 aa11.9□□□□□ -0.5
APOBEC3D-201ENST00000216099 VTI1BQ9UEU0 232 aa11.9□□□□□ -0.5
APOBEC3D-201ENST00000216099 FER1L6Q2WGJ9 1857 aa11.9□□□□□ -0.5
APOBEC3D-201ENST00000216099 PNMA6FA0A0J9YX94 578 aa11.9□□□□□ -0.5
APOBEC3D-201ENST00000216099 XRCC5P13010 732 aaKnown RBP11.9□□□□□ -0.5
APOBEC3D-201ENST00000216099 AOC3Q16853 763 aa11.9□□□□□ -0.5
APOBEC3D-201ENST00000216099 TATDN1Q6P1N9 297 aa11.9□□□□□ -0.5
APOBEC3D-201ENST00000216099 NEK8Q86SG6 692 aa11.9□□□□□ -0.5
APOBEC3D-201ENST00000216099 REXO1Q8N1G1 1221 aaKnown RBP11.9□□□□□ -0.5
APOBEC3D-201ENST00000216099 DCAF4Q8WV16 495 aa11.9□□□□□ -0.5
APOBEC3D-201ENST00000216099 CPVLQ9H3G5 476 aa11.9□□□□□ -0.5
APOBEC3D-201ENST00000216099 DNAJC18Q9H819 358 aa11.9□□□□□ -0.5
APOBEC3D-201ENST00000216099 PPCSQ9HAB8 311 aa11.9□□□□□ -0.5
APOBEC3D-201ENST00000216099 MAGEF1Q9HAY2 307 aa11.9□□□□□ -0.5
APOBEC3D-201ENST00000216099 FANCLQ9NW38 375 aa11.9□□□□□ -0.5
APOBEC3D-201ENST00000216099 MYL1P05976 194 aa11.89□□□□□ -0.51
APOBEC3D-201ENST00000216099 KCNJ6P48051 423 aa11.89□□□□□ -0.51
APOBEC3D-201ENST00000216099 HOMER1Q86YM7 354 aa11.89□□□□□ -0.51
APOBEC3D-201ENST00000216099 ATL2Q8NHH9 583 aa11.89□□□□□ -0.51
APOBEC3D-201ENST00000216099 VPS33BQ9H267 617 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms