RNA–Protein interactions for RNA: ENST00000212355.8

TGFBR3-201, Transcript of transforming growth factor beta receptor 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TGFBR3, Length 6,465 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-201ENST00000212355 H2AFZP0C0S5 128 aa14.82□□□□□ -0.04
TGFBR3-201ENST00000212355 PHBP35232 272 aa14.82□□□□□ -0.04
TGFBR3-201ENST00000212355 EIF4A3P38919 411 aaKnown RBP14.82□□□□□ -0.04
TGFBR3-201ENST00000212355 RBM6P78332 1123 aaKnown RBP14.82□□□□□ -0.04
TGFBR3-201ENST00000212355 CEP128Q6ZU80 1094 aa14.82□□□□□ -0.04
TGFBR3-201ENST00000212355 H2AFVQ71UI9 128 aa14.82□□□□□ -0.04
TGFBR3-201ENST00000212355 PRPF38AQ8NAV1 312 aaKnown RBP14.82□□□□□ -0.04
TGFBR3-201ENST00000212355 IFT122Q9HBG6 1241 aa14.82□□□□□ -0.04
TGFBR3-201ENST00000212355 MLXIPLQ9NP71 852 aa14.82□□□□□ -0.04
TGFBR3-201ENST00000212355 HOXB7P09629 217 aa14.82□□□□□ -0.04
TGFBR3-201ENST00000212355 CYP2D6P10635 497 aa14.82□□□□□ -0.04
TGFBR3-201ENST00000212355 TCP11X2Q5H9J9 407 aa14.82□□□□□ -0.04
TGFBR3-201ENST00000212355 RAB3IPQ96QF0 476 aaPredicted RBP14.82□□□□□ -0.04
TGFBR3-201ENST00000212355 CSRNP1Q96S65 589 aa14.82□□□□□ -0.04
TGFBR3-201ENST00000212355 GCNT4Q9P109 453 aa14.82□□□□□ -0.04
TGFBR3-201ENST00000212355 MAPK4P31152 587 aa14.82□□□□□ -0.04
TGFBR3-201ENST00000212355 NSFP46459 744 aaKnown RBP14.82□□□□□ -0.04
TGFBR3-201ENST00000212355 HADHQ16836 314 aaKnown RBP14.82□□□□□ -0.04
TGFBR3-201ENST00000212355 SUPT20HQ8NEM7 779 aa14.82□□□□□ -0.04
TGFBR3-201ENST00000212355 FAM71BQ8TC56 605 aa14.82□□□□□ -0.04
TGFBR3-201ENST00000212355 ZWILCHQ9H900 591 aa14.82□□□□□ -0.04
TGFBR3-201ENST00000212355 PIH1D3Q9NQM4 214 aaKnown RBP14.82□□□□□ -0.04
TGFBR3-201ENST00000212355 ACTN1P12814 892 aa14.82□□□□□ -0.04
TGFBR3-201ENST00000212355 ZMYM1Q5SVZ6 1142 aa14.82□□□□□ -0.04
TGFBR3-201ENST00000212355 CCDC51Q96ER9 411 aa14.82□□□□□ -0.04
TGFBR3-201ENST00000212355 INTS9Q9NV88 658 aaKnown RBP14.82□□□□□ -0.04
TGFBR3-201ENST00000212355 SRP68Q9UHB9 627 aaKnown RBP14.82□□□□□ -0.04
TGFBR3-201ENST00000212355 TSR3Q9UJK0 312 aaKnown RBP14.82□□□□□ -0.04
TGFBR3-201ENST00000212355 SPECC1L-ADORA2AF8WAN1 911 aa14.81□□□□□ -0.04
TGFBR3-201ENST00000212355 TRPA1O75762 1119 aa14.81□□□□□ -0.04
TGFBR3-201ENST00000212355 TRIM37O94972 964 aa14.81□□□□□ -0.04
TGFBR3-201ENST00000212355 ZNF449Q6P9G9 518 aa14.81□□□□□ -0.04
TGFBR3-201ENST00000212355 HSPH1Q92598 858 aa14.81□□□□□ -0.04
TGFBR3-201ENST00000212355 FAM196BA6NMK8 535 aa14.81□□□□□ -0.04
TGFBR3-201ENST00000212355 RAD17O75943 681 aa14.81□□□□□ -0.04
TGFBR3-201ENST00000212355 PDE8BO95263 885 aa14.81□□□□□ -0.04
TGFBR3-201ENST00000212355 PLCG1P19174 1290 aa14.81□□□□□ -0.04
TGFBR3-201ENST00000212355 SCYL3Q8IZE3 742 aa14.81□□□□□ -0.04
TGFBR3-201ENST00000212355 TTC30BQ8N4P2 665 aa14.81□□□□□ -0.04
TGFBR3-201ENST00000212355 CHURC1Q8WUH1 139 aa14.81□□□□□ -0.04
TGFBR3-201ENST00000212355 BASP1P80723 227 aaKnown RBP14.81□□□□□ -0.04
TGFBR3-201ENST00000212355 BRDTQ58F21 947 aaPredicted RBP14.81□□□□□ -0.04
TGFBR3-201ENST00000212355 HABP4Q5JVS0 413 aaKnown RBP14.81□□□□□ -0.04
TGFBR3-201ENST00000212355 HIPK4Q8NE63 616 aa14.81□□□□□ -0.04
TGFBR3-201ENST00000212355 MORC4Q8TE76 937 aa14.81□□□□□ -0.04
TGFBR3-201ENST00000212355 UGGT1Q9NYU2 1555 aa14.81□□□□□ -0.04
TGFBR3-201ENST00000212355 MYOM2P54296 1465 aa14.81□□□□□ -0.04
TGFBR3-201ENST00000212355 GOLGA8MH3BSY2 632 aa14.81□□□□□ -0.04
TGFBR3-201ENST00000212355 DKC1O60832 514 aaKnown RBP eCLIP14.81□□□□□ -0.046e-7■■■■■ 75.9
TGFBR3-201ENST00000212355 P4HA1P13674 534 aa14.81□□□□□ -0.04
TGFBR3-201ENST00000212355 KIF23Q02241 960 aaPredicted RBP14.81□□□□□ -0.04
TGFBR3-201ENST00000212355 SNCBQ16143 134 aa14.81□□□□□ -0.04
TGFBR3-201ENST00000212355 ZNF394Q53GI3 561 aa14.81□□□□□ -0.04
TGFBR3-201ENST00000212355 ARHGAP24Q8N264 748 aa14.81□□□□□ -0.04
TGFBR3-201ENST00000212355 EXT2Q93063 718 aa14.81□□□□□ -0.04
TGFBR3-201ENST00000212355 RRP15Q9Y3B9 282 aaKnown RBP14.81□□□□□ -0.04
TGFBR3-201ENST00000212355 UNC13AQ9UPW8 1703 aa14.81□□□□□ -0.04
TGFBR3-201ENST00000212355 TFAMQ00059 246 aaKnown RBP14.81□□□□□ -0.04
TGFBR3-201ENST00000212355 PASD1Q8IV76 773 aa14.81□□□□□ -0.04
TGFBR3-201ENST00000212355 CSADQ9Y600 493 aa14.81□□□□□ -0.04
TGFBR3-201ENST00000212355 MAP3K15Q6ZN16 1313 aa14.8□□□□□ -0.04
TGFBR3-201ENST00000212355 CLCN6P51797 869 aa14.8□□□□□ -0.04
TGFBR3-201ENST00000212355 MTERF2Q49AM1 385 aa14.8□□□□□ -0.04
TGFBR3-201ENST00000212355 SGO2Q562F6 1265 aa14.8□□□□□ -0.04
TGFBR3-201ENST00000212355 PIGOQ8TEQ8 1089 aa14.8□□□□□ -0.04
TGFBR3-201ENST00000212355 P3H4Q92791 437 aa14.8□□□□□ -0.04
TGFBR3-201ENST00000212355 VCXQ9H320 206 aa14.8□□□□□ -0.04
TGFBR3-201ENST00000212355 ESYT2A0FGR8 921 aa14.8□□□□□ -0.04
TGFBR3-201ENST00000212355 PPFIA4O75335 1185 aa14.8□□□□□ -0.04
TGFBR3-201ENST00000212355 SLC39A14Q15043 492 aa14.8□□□□□ -0.04
TGFBR3-201ENST00000212355 C10orf76Q5T2E6 689 aa14.8□□□□□ -0.04
TGFBR3-201ENST00000212355 SMIM5Q71RC9 77 aa14.8□□□□□ -0.04
TGFBR3-201ENST00000212355 ZBTB8OSQ8IWT0 167 aa14.8□□□□□ -0.04
TGFBR3-201ENST00000212355 RYBPQ8N488 228 aaPredicted RBP14.8□□□□□ -0.04
TGFBR3-201ENST00000212355 P2RX5Q93086 422 aa14.8□□□□□ -0.04
TGFBR3-201ENST00000212355 MRFAP1L1Q96HT8 127 aa14.8□□□□□ -0.04
TGFBR3-201ENST00000212355 GOLPH3LQ9H4A5 285 aa14.8□□□□□ -0.04
TGFBR3-201ENST00000212355 KIF9Q9HAQ2 790 aa14.8□□□□□ -0.04
TGFBR3-201ENST00000212355 SLAIN2Q9P270 581 aa14.8□□□□□ -0.04
TGFBR3-201ENST00000212355 TOM1L1O75674 476 aa14.8□□□□□ -0.04
TGFBR3-201ENST00000212355 ALDH1B1P30837 517 aa14.8□□□□□ -0.04
TGFBR3-201ENST00000212355 GRK7Q8WTQ7 553 aa14.8□□□□□ -0.04
TGFBR3-201ENST00000212355 GLT8D2Q9H1C3 349 aa14.8□□□□□ -0.04
TGFBR3-201ENST00000212355 NOVA2Q9UNW9 492 aaKnown RBP14.8□□□□□ -0.04
TGFBR3-201ENST00000212355 KDM6BO15054 1643 aa14.8□□□□□ -0.04
TGFBR3-201ENST00000212355 PPEF1O14829 653 aaPredicted RBP14.8□□□□□ -0.04
TGFBR3-201ENST00000212355 DDAH1O94760 285 aa14.8□□□□□ -0.04
TGFBR3-201ENST00000212355 PRR29P0C7W0 189 aa14.8□□□□□ -0.04
TGFBR3-201ENST00000212355 LONP1P36776 959 aaKnown RBP14.8□□□□□ -0.04
TGFBR3-201ENST00000212355 PAGE5Q96GU1 130 aa14.8□□□□□ -0.04
TGFBR3-201ENST00000212355 CDC23Q9UJX2 597 aa14.8□□□□□ -0.04
TGFBR3-201ENST00000212355 ACSL3O95573 720 aa14.8□□□□□ -0.04
TGFBR3-201ENST00000212355 KRT1P04264 644 aa14.8□□□□□ -0.04
TGFBR3-201ENST00000212355 CALN1Q9BXU9 219 aa14.8□□□□□ -0.04
TGFBR3-201ENST00000212355 NUCKS1Q9H1E3 243 aaKnown RBP14.8□□□□□ -0.04
TGFBR3-201ENST00000212355 ABCB6Q9NP58 842 aa14.8□□□□□ -0.04
TGFBR3-201ENST00000212355 GDAQ9Y2T3 454 aa14.8□□□□□ -0.04
TGFBR3-201ENST00000212355 MRPL11Q9Y3B7 192 aaKnown RBP14.8□□□□□ -0.04
TGFBR3-201ENST00000212355 PCDHA13Q9Y5I0 950 aa14.8□□□□□ -0.04
TGFBR3-201ENST00000212355 COL4A3BPQ9Y5P4 624 aa14.8□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms