RNA–Protein interactions for RNA: ENST00000187762.6

TMEM38A-201, Transcript of transmembrane protein 38A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM38A, Length 2,649 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM38A-201ENST00000187762 ARMC3Q5W041 872 aa16.38■□□□□ 0.21
TMEM38A-201ENST00000187762 C8orf74Q6P047 294 aa16.38■□□□□ 0.21
TMEM38A-201ENST00000187762 L3MBTL3Q96JM7 780 aaPredicted RBP16.38■□□□□ 0.21
TMEM38A-201ENST00000187762 RNF41Q9H4P4 317 aaPredicted RBP16.38■□□□□ 0.21
TMEM38A-201ENST00000187762 SMARCAL1Q9NZC9 954 aa16.38■□□□□ 0.21
TMEM38A-201ENST00000187762 NOP53Q9NZM5 478 aaKnown RBP16.38■□□□□ 0.21
TMEM38A-201ENST00000187762 NFU1Q9UMS0 254 aa16.38■□□□□ 0.21
TMEM38A-201ENST00000187762 PCDHGC5Q9Y5F6 944 aa16.38■□□□□ 0.21
TMEM38A-201ENST00000187762 LOC102724428A0A0B4J2F2 783 aa16.37■□□□□ 0.21
TMEM38A-201ENST00000187762 NEFHP12036 1026 aa16.37■□□□□ 0.21
TMEM38A-201ENST00000187762 CARSP49589 748 aaKnown RBP16.37■□□□□ 0.21
TMEM38A-201ENST00000187762 SIK1P57059 783 aa16.37■□□□□ 0.21
TMEM38A-201ENST00000187762 PPARDQ03181 441 aa16.37■□□□□ 0.21
TMEM38A-201ENST00000187762 DPYDQ12882 1025 aa16.37■□□□□ 0.21
TMEM38A-201ENST00000187762 CWF19L1Q69YN2 538 aaKnown RBP16.37■□□□□ 0.21
TMEM38A-201ENST00000187762 SLC12A6Q9UHW9 1150 aa16.37■□□□□ 0.21
TMEM38A-201ENST00000187762 BAZ2BQ9UIF8 2168 aaKnown RBP16.37■□□□□ 0.21
TMEM38A-201ENST00000187762 CACNA1SQ13698 1873 aa16.37■□□□□ 0.21
TMEM38A-201ENST00000187762 WNT7AO00755 349 aa16.37■□□□□ 0.21
TMEM38A-201ENST00000187762 BACH1O14867 736 aa16.37■□□□□ 0.21
TMEM38A-201ENST00000187762 PLEKHA8P1O95397 391 aa16.37■□□□□ 0.21
TMEM38A-201ENST00000187762 CASP1P29466 404 aa16.37■□□□□ 0.21
TMEM38A-201ENST00000187762 BLMHQ13867 455 aa16.37■□□□□ 0.21
TMEM38A-201ENST00000187762 PARP10Q53GL7 1025 aa16.37■□□□□ 0.21
TMEM38A-201ENST00000187762 MFN1Q8IWA4 741 aa16.37■□□□□ 0.21
TMEM38A-201ENST00000187762 IFT20Q8IY31 132 aa16.37■□□□□ 0.21
TMEM38A-201ENST00000187762 RPUSD2Q8IZ73 545 aaKnown RBP16.37■□□□□ 0.21
TMEM38A-201ENST00000187762 LUC7L2Q9Y383 392 aaKnown RBP16.37■□□□□ 0.21
TMEM38A-201ENST00000187762 LAMB2P55268 1798 aa16.37■□□□□ 0.21
TMEM38A-201ENST00000187762 AFMP43652 599 aa16.36■□□□□ 0.21
TMEM38A-201ENST00000187762 UBXN1Q04323 297 aa16.36■□□□□ 0.21
TMEM38A-201ENST00000187762 TSR1Q2NL82 804 aaKnown RBP16.36■□□□□ 0.21
TMEM38A-201ENST00000187762 ENAHQ8N8S7 591 aaPredicted RBP16.36■□□□□ 0.21
TMEM38A-201ENST00000187762 ESR2Q92731 530 aa16.36■□□□□ 0.21
TMEM38A-201ENST00000187762 TMBIM4Q9HC24 238 aa16.36■□□□□ 0.21
TMEM38A-201ENST00000187762 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP16.36■□□□□ 0.214e-6■■■■□ 23.7
TMEM38A-201ENST00000187762 SRPRBQ9Y5M8 271 aaKnown RBP16.36■□□□□ 0.21
TMEM38A-201ENST00000187762 A0A1B0GUL6 1792 aa16.36■□□□□ 0.21
TMEM38A-201ENST00000187762 A0A087X0B3 334 aa16.36■□□□□ 0.21
TMEM38A-201ENST00000187762 CYLC1P35663 651 aaPredicted RBP16.36■□□□□ 0.21
TMEM38A-201ENST00000187762 SPAG1Q07617 926 aa16.36■□□□□ 0.21
TMEM38A-201ENST00000187762 PAK2Q13177 524 aa16.36■□□□□ 0.21
TMEM38A-201ENST00000187762 PKN1Q16512 942 aa16.36■□□□□ 0.21
TMEM38A-201ENST00000187762 GKAP1Q5VSY0 366 aaPredicted RBP16.36■□□□□ 0.21
TMEM38A-201ENST00000187762 ARMC9Q7Z3E5 817 aa16.36■□□□□ 0.21
TMEM38A-201ENST00000187762 MAATS1Q7Z4T9 603 aa16.36■□□□□ 0.21
TMEM38A-201ENST00000187762 TMTC2Q8N394 836 aa16.36■□□□□ 0.21
TMEM38A-201ENST00000187762 CCDC63Q8NA47 563 aa16.36■□□□□ 0.21
TMEM38A-201ENST00000187762 AGAP11Q8TF27 550 aa16.36■□□□□ 0.21
TMEM38A-201ENST00000187762 PAIP2Q9BPZ3 127 aaKnown RBP16.36■□□□□ 0.21
TMEM38A-201ENST00000187762 RIOK1Q9BRS2 568 aaKnown RBP16.36■□□□□ 0.21
TMEM38A-201ENST00000187762 GDF3Q9NR23 364 aa16.36■□□□□ 0.21
TMEM38A-201ENST00000187762 SLC5A4Q9NY91 659 aa16.36■□□□□ 0.21
TMEM38A-201ENST00000187762 EHD2Q9NZN4 543 aa16.36■□□□□ 0.21
TMEM38A-201ENST00000187762 A6NHS1 94 aa16.35■□□□□ 0.21
TMEM38A-201ENST00000187762 DIAPH2O60879 1101 aa16.35■□□□□ 0.21
TMEM38A-201ENST00000187762 CLTAP09496 248 aa16.35■□□□□ 0.21
TMEM38A-201ENST00000187762 GUCY2FP51841 1108 aa16.35■□□□□ 0.21
TMEM38A-201ENST00000187762 EPSTI1Q96J88 318 aa16.35■□□□□ 0.21
TMEM38A-201ENST00000187762 NDST4Q9H3R1 872 aa16.35■□□□□ 0.21
TMEM38A-201ENST00000187762 DUOX1Q9NRD9 1551 aa16.35■□□□□ 0.21
TMEM38A-201ENST00000187762 CASZ1Q86V15 1759 aa16.35■□□□□ 0.21
TMEM38A-201ENST00000187762 GLI1P08151 1106 aa16.35■□□□□ 0.21
TMEM38A-201ENST00000187762 PRLRP16471 622 aa16.35■□□□□ 0.21
TMEM38A-201ENST00000187762 TMOD1P28289 359 aa16.35■□□□□ 0.21
TMEM38A-201ENST00000187762 PAPOLAP51003 745 aaKnown RBP16.35■□□□□ 0.21
TMEM38A-201ENST00000187762 DDB1Q16531 1140 aa16.35■□□□□ 0.21
TMEM38A-201ENST00000187762 CDC37Q16543 378 aaPredicted RBP16.35■□□□□ 0.21
TMEM38A-201ENST00000187762 TCP11X2Q5H9J9 407 aa16.35■□□□□ 0.21
TMEM38A-201ENST00000187762 SMIM5Q71RC9 77 aa16.35■□□□□ 0.21
TMEM38A-201ENST00000187762 PNMA8AQ86V59 439 aaPredicted RBP16.35■□□□□ 0.21
TMEM38A-201ENST00000187762 ZNF579Q8NAF0 562 aaKnown RBP16.35■□□□□ 0.21
TMEM38A-201ENST00000187762 KLHL23Q8NBE8 558 aa16.35■□□□□ 0.21
TMEM38A-201ENST00000187762 ZNF384Q8TF68 577 aa16.35■□□□□ 0.21
TMEM38A-201ENST00000187762 PLAAQ9Y263 795 aa16.35■□□□□ 0.21
TMEM38A-201ENST00000187762 RTL9Q8NET4 1388 aa16.34■□□□□ 0.21
TMEM38A-201ENST00000187762 KCNJ18B7U540 433 aa16.34■□□□□ 0.21
TMEM38A-201ENST00000187762 ADAMTS2O95450 1211 aa16.34■□□□□ 0.21
TMEM38A-201ENST00000187762 PYGLP06737 847 aa16.34■□□□□ 0.21
TMEM38A-201ENST00000187762 KCNJ12Q14500 433 aa16.34■□□□□ 0.21
TMEM38A-201ENST00000187762 ERFEQ4G0M1 354 aa16.34■□□□□ 0.21
TMEM38A-201ENST00000187762 NFRKBQ6P4R8 1299 aa16.34■□□□□ 0.21
TMEM38A-201ENST00000187762 SMCR8Q8TEV9 937 aaPredicted RBP16.34■□□□□ 0.21
TMEM38A-201ENST00000187762 IFT81Q8WYA0 676 aa16.34■□□□□ 0.21
TMEM38A-201ENST00000187762 CNKSR1Q969H4 720 aa16.34■□□□□ 0.21
TMEM38A-201ENST00000187762 ZSCAN10Q96SZ4 725 aaPredicted RBP16.34■□□□□ 0.21
TMEM38A-201ENST00000187762 RNF26Q9BY78 433 aaPredicted RBP16.34■□□□□ 0.21
TMEM38A-201ENST00000187762 RBM12Q9NTZ6 932 aaKnown RBP16.34■□□□□ 0.21
TMEM38A-201ENST00000187762 GTF3C5Q9Y5Q8 519 aaPredicted RBP16.34■□□□□ 0.21
TMEM38A-201ENST00000187762 V9GY48 417 aaPredicted RBP16.34■□□□□ 0.21
TMEM38A-201ENST00000187762 MYH13Q9UKX3 1938 aa16.34■□□□□ 0.21
TMEM38A-201ENST00000187762 ZNF804BA4D1E1 1349 aa16.34■□□□□ 0.21
TMEM38A-201ENST00000187762 ESYT3A0FGR9 886 aa16.34■□□□□ 0.21
TMEM38A-201ENST00000187762 GOLGA6L10A6NI86 522 aa16.34■□□□□ 0.21
TMEM38A-201ENST00000187762 FERP16591 822 aa16.34■□□□□ 0.21
TMEM38A-201ENST00000187762 MARCH10Q8NA82 808 aaPredicted RBP16.34■□□□□ 0.21
TMEM38A-201ENST00000187762 ZNF526Q8TF50 670 aaPredicted RBP16.34■□□□□ 0.21
TMEM38A-201ENST00000187762 RAPGEF5Q92565 580 aa16.34■□□□□ 0.21
TMEM38A-201ENST00000187762 TMX4Q9H1E5 349 aaPredicted RBP16.34■□□□□ 0.21
TMEM38A-201ENST00000187762 ZSCAN5CA6NGD5 496 aaPredicted RBP16.33■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 91.2 ms