RNA–Protein interactions for RNA: ENSMUST00000172711.1

Trim40-203, Transcript of Tripartite motif-containing protein 40, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Trim40, Length 1,539 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim40-203ENSMUST00000172711 Wnt8bQ9WUD6 350 aa9.4□□□□□ -0.91
Trim40-203ENSMUST00000172711 C87977A2A958 498 aa9.39□□□□□ -0.91
Trim40-203ENSMUST00000172711 Klhl34A2AI76 644 aa9.39□□□□□ -0.91
Trim40-203ENSMUST00000172711 DgkhD3YXJ0 1156 aa9.39□□□□□ -0.91
Trim40-203ENSMUST00000172711 Cyp3a59D3Z2W7 503 aa9.39□□□□□ -0.91
Trim40-203ENSMUST00000172711 Vwa3bJ9JI28 736 aa9.39□□□□□ -0.91
Trim40-203ENSMUST00000172711 Dnajc2P54103 621 aaKnown RBP9.39□□□□□ -0.91
Trim40-203ENSMUST00000172711 Kcna2P63141 499 aa9.39□□□□□ -0.91
Trim40-203ENSMUST00000172711 Scg2Q03517 617 aa9.39□□□□□ -0.91
Trim40-203ENSMUST00000172711 Rgl1Q60695 768 aa9.39□□□□□ -0.91
Trim40-203ENSMUST00000172711 Arhgef2Q60875 985 aa9.39□□□□□ -0.91
Trim40-203ENSMUST00000172711 Ccdc85bQ6PDY0 202 aa9.39□□□□□ -0.91
Trim40-203ENSMUST00000172711 Atg4cQ811C2 458 aa9.39□□□□□ -0.91
Trim40-203ENSMUST00000172711 Terb1Q8C0V1 768 aa9.39□□□□□ -0.91
Trim40-203ENSMUST00000172711 Adcy3Q8VHH7 1145 aa9.39□□□□□ -0.91
Trim40-203ENSMUST00000172711 Arhgap8Q9CXP4 425 aa9.39□□□□□ -0.91
Trim40-203ENSMUST00000172711 Gcc1Q9D4H2 778 aa9.39□□□□□ -0.91
Trim40-203ENSMUST00000172711 DgkeQ9R1C6 564 aa9.39□□□□□ -0.91
Trim40-203ENSMUST00000172711 Fem1bQ9Z2G0 627 aa9.39□□□□□ -0.91
Trim40-203ENSMUST00000172711 Zfp804bA0A0G2JGH6 1343 aa9.39□□□□□ -0.91
Trim40-203ENSMUST00000172711 Wdr19Q3UGF1 1341 aa9.39□□□□□ -0.91
Trim40-203ENSMUST00000172711 Tbkbp1A2A9T0 611 aa9.38□□□□□ -0.91
Trim40-203ENSMUST00000172711 Cypt3B1AY64 174 aa9.38□□□□□ -0.91
Trim40-203ENSMUST00000172711 Zkscan2G3X952 960 aa9.38□□□□□ -0.91
Trim40-203ENSMUST00000172711 Cyp2d34L7N463 504 aa9.38□□□□□ -0.91
Trim40-203ENSMUST00000172711 Ppef2O35385 757 aa9.38□□□□□ -0.91
Trim40-203ENSMUST00000172711 P04214 136 aa9.38□□□□□ -0.91
Trim40-203ENSMUST00000172711 Mboat4P0C7A3 435 aa9.38□□□□□ -0.91
Trim40-203ENSMUST00000172711 TbcaP48428 108 aaKnown RBP9.38□□□□□ -0.91
Trim40-203ENSMUST00000172711 Col9a1Q05722 921 aa9.38□□□□□ -0.91
Trim40-203ENSMUST00000172711 Wwc1Q5SXA9 1104 aa9.38□□□□□ -0.91
Trim40-203ENSMUST00000172711 GcgrQ61606 485 aa9.38□□□□□ -0.91
Trim40-203ENSMUST00000172711 Hoxa13Q62424 386 aa9.38□□□□□ -0.91
Trim40-203ENSMUST00000172711 Churc1Q6DG52 112 aa9.38□□□□□ -0.91
Trim40-203ENSMUST00000172711 Dalrd3Q6PJN8 538 aa9.38□□□□□ -0.91
Trim40-203ENSMUST00000172711 Sh3tc2Q80VA5 1289 aa9.38□□□□□ -0.91
Trim40-203ENSMUST00000172711 Bcas3Q8CCN5 928 aa9.38□□□□□ -0.91
Trim40-203ENSMUST00000172711 Q8K2W9 541 aa9.38□□□□□ -0.91
Trim40-203ENSMUST00000172711 Ddx41Q91VN6 622 aaKnown RBP9.38□□□□□ -0.91
Trim40-203ENSMUST00000172711 Baz2aQ91YE5 1889 aaKnown RBP9.38□□□□□ -0.91
Trim40-203ENSMUST00000172711 Necab2Q91ZP9 389 aa9.38□□□□□ -0.91
Trim40-203ENSMUST00000172711 Coa7Q921H9 231 aa9.38□□□□□ -0.91
Trim40-203ENSMUST00000172711 Slc5a5Q99PN0 618 aa9.38□□□□□ -0.91
Trim40-203ENSMUST00000172711 Six6os1Q9CTN5 574 aa9.38□□□□□ -0.91
Trim40-203ENSMUST00000172711 Serpinb3bQ9D1Q5 387 aa9.38□□□□□ -0.91
Trim40-203ENSMUST00000172711 Zbtb43Q9DAI4 467 aa9.38□□□□□ -0.91
Trim40-203ENSMUST00000172711 Mkrn2Q9ERV1 416 aaKnown RBP9.38□□□□□ -0.91
Trim40-203ENSMUST00000172711 Ak2Q9WTP6 239 aa9.38□□□□□ -0.91
Trim40-203ENSMUST00000172711 Mfap1aC0HKD8 439 aaKnown RBP9.37□□□□□ -0.91
Trim40-203ENSMUST00000172711 Mfap1bC0HKD9 439 aaKnown RBP9.37□□□□□ -0.91
Trim40-203ENSMUST00000172711 Axin1O35625 863 aa9.37□□□□□ -0.91
Trim40-203ENSMUST00000172711 MecomP14404 1042 aa9.37□□□□□ -0.91
Trim40-203ENSMUST00000172711 EporP14753 507 aa9.37□□□□□ -0.91
Trim40-203ENSMUST00000172711 Taf1bP97358 586 aa9.37□□□□□ -0.91
Trim40-203ENSMUST00000172711 Brd9Q3UQU0 596 aaKnown RBP9.37□□□□□ -0.91
Trim40-203ENSMUST00000172711 LrmpQ60664 539 aa9.37□□□□□ -0.91
Trim40-203ENSMUST00000172711 Fbxo11Q7TPD1 930 aaKnown RBP9.37□□□□□ -0.91
Trim40-203ENSMUST00000172711 Olfr1494Q8VGP8 315 aa9.37□□□□□ -0.91
Trim40-203ENSMUST00000172711 Pus10Q9D3U0 527 aa9.37□□□□□ -0.91
Trim40-203ENSMUST00000172711 Tfap4Q9JIZ5 338 aa9.37□□□□□ -0.91
Trim40-203ENSMUST00000172711 Ccdc88cQ6VGS5 2009 aa9.36□□□□□ -0.91
Trim40-203ENSMUST00000172711 Phlpp2Q8BXA7 1320 aa9.36□□□□□ -0.91
Trim40-203ENSMUST00000172711 Ugt1a5B2RT14 529 aa9.36□□□□□ -0.91
Trim40-203ENSMUST00000172711 Ptpn11P35235 597 aa9.36□□□□□ -0.91
Trim40-203ENSMUST00000172711 PfkmP47857 780 aaKnown RBP9.36□□□□□ -0.91
Trim40-203ENSMUST00000172711 Wdr5P61965 334 aa9.36□□□□□ -0.91
Trim40-203ENSMUST00000172711 Cyp2e1Q05421 493 aa9.36□□□□□ -0.91
Trim40-203ENSMUST00000172711 Spink5Q148R4 1017 aa9.36□□□□□ -0.91
Trim40-203ENSMUST00000172711 Lca5Q80ST9 704 aa9.36□□□□□ -0.91
Trim40-203ENSMUST00000172711 Cwf19l2Q8BG79 887 aaKnown RBP9.36□□□□□ -0.91
Trim40-203ENSMUST00000172711 Usp20Q8C6M1 916 aa9.36□□□□□ -0.91
Trim40-203ENSMUST00000172711 Mrpl11Q9CQF0 192 aaKnown RBP9.36□□□□□ -0.91
Trim40-203ENSMUST00000172711 Plod3Q9R0E1 741 aa9.36□□□□□ -0.91
Trim40-203ENSMUST00000172711 Col4a3Q9QZS0 1669 aa9.36□□□□□ -0.91
Trim40-203ENSMUST00000172711 Usp42B2RQC2 1324 aaKnown RBP9.36□□□□□ -0.91
Trim40-203ENSMUST00000172711 Smim22J3QP37 91 aa9.36□□□□□ -0.91
Trim40-203ENSMUST00000172711 P01644 108 aa9.36□□□□□ -0.91
Trim40-203ENSMUST00000172711 P01645 108 aa9.36□□□□□ -0.91
Trim40-203ENSMUST00000172711 P01646 108 aa9.36□□□□□ -0.91
Trim40-203ENSMUST00000172711 P01647 108 aa9.36□□□□□ -0.91
Trim40-203ENSMUST00000172711 Ifnar1P33896 590 aa9.36□□□□□ -0.91
Trim40-203ENSMUST00000172711 Mphosph8Q3TYA6 858 aaKnown RBP9.36□□□□□ -0.91
Trim40-203ENSMUST00000172711 Nsrp1Q5NCR9 542 aa9.36□□□□□ -0.91
Trim40-203ENSMUST00000172711 Foxd4Q60688 444 aa9.36□□□□□ -0.91
Trim40-203ENSMUST00000172711 Map3k11Q80XI6 850 aa9.36□□□□□ -0.91
Trim40-203ENSMUST00000172711 Bmp3Q8BHE5 468 aa9.36□□□□□ -0.91
Trim40-203ENSMUST00000172711 PisdQ8BSF4 406 aa9.36□□□□□ -0.91
Trim40-203ENSMUST00000172711 Rassf8Q8CJ96 419 aa9.36□□□□□ -0.91
Trim40-203ENSMUST00000172711 Dcaf8Q8N7N5 591 aa9.36□□□□□ -0.91
Trim40-203ENSMUST00000172711 Prrg2Q8R182 198 aa9.36□□□□□ -0.91
Trim40-203ENSMUST00000172711 Oit3Q8R4V5 546 aa9.36□□□□□ -0.91
Trim40-203ENSMUST00000172711 Tekt1Q9DAJ2 418 aa9.36□□□□□ -0.91
Trim40-203ENSMUST00000172711 Wdr46Q9Z0H1 622 aaKnown RBP9.36□□□□□ -0.91
Trim40-203ENSMUST00000172711 Homer1Q9Z2Y3 366 aa9.36□□□□□ -0.91
Trim40-203ENSMUST00000172711 Brd1E9PZ26 1189 aaKnown RBP9.35□□□□□ -0.91
Trim40-203ENSMUST00000172711 Olfr67F8VPJ8 320 aa9.35□□□□□ -0.91
Trim40-203ENSMUST00000172711 PtprcP06800 1291 aa9.35□□□□□ -0.91
Trim40-203ENSMUST00000172711 Ca3P16015 260 aa9.35□□□□□ -0.91
Trim40-203ENSMUST00000172711 Ephb3P54754 993 aaKnown RBP9.35□□□□□ -0.91
Trim40-203ENSMUST00000172711 Bmp1P98063 991 aa9.35□□□□□ -0.91
Retrieved 100 of 22,080 RNA–protein pairs in 37.7 ms