RNA–Protein interactions for RNA: ENSMUST00000165165.2

Col6a5-201, Transcript of Collagen alpha-5(VI) chain, mousemouse

TSL 5 BASIC

Gene Col6a5, Length 8,046 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a5-201ENSMUST00000165165 Nfe2l2Q60795 597 aa10.07□□□□□ -0.8
Col6a5-201ENSMUST00000165165 Ahcyl2Q68FL4 613 aaKnown RBP10.07□□□□□ -0.8
Col6a5-201ENSMUST00000165165 E330017A01RikQ8BU47 192 aa10.07□□□□□ -0.8
Col6a5-201ENSMUST00000165165 Zscan12Q9Z1D7 501 aa10.07□□□□□ -0.8
Col6a5-201ENSMUST00000165165 BicraF8VPZ9 1578 aa10.06□□□□□ -0.8
Col6a5-201ENSMUST00000165165 SympkQ80X82 1284 aa10.06□□□□□ -0.8
Col6a5-201ENSMUST00000165165 Cdca7lQ922M5 438 aa10.06□□□□□ -0.8
Col6a5-201ENSMUST00000165165 DohhA0A1Y7VJ29 135 aa10.06□□□□□ -0.8
Col6a5-201ENSMUST00000165165 Ccdc78D3Z5T1 437 aa10.06□□□□□ -0.8
Col6a5-201ENSMUST00000165165 Casp14O89094 257 aa10.06□□□□□ -0.8
Col6a5-201ENSMUST00000165165 Nom1Q3UFM5 854 aaKnown RBP10.06□□□□□ -0.8
Col6a5-201ENSMUST00000165165 Krt87Q6IMF0 495 aa10.06□□□□□ -0.8
Col6a5-201ENSMUST00000165165 NemfQ8CCP0 1064 aaKnown RBP10.06□□□□□ -0.8
Col6a5-201ENSMUST00000165165 Ifit3bE9PV48 403 aa10.06□□□□□ -0.8
Col6a5-201ENSMUST00000165165 Pou5f1P20263 352 aaKnown RBP10.06□□□□□ -0.8
Col6a5-201ENSMUST00000165165 Trim75Q3UWZ0 467 aa10.06□□□□□ -0.8
Col6a5-201ENSMUST00000165165 HiraQ61666 1015 aa10.06□□□□□ -0.8
Col6a5-201ENSMUST00000165165 Agr3Q8R3W7 165 aa10.06□□□□□ -0.8
Col6a5-201ENSMUST00000165165 Sdr42e1Q9D665 394 aa10.06□□□□□ -0.8
Col6a5-201ENSMUST00000165165 Kif23E9Q5G3 953 aa10.06□□□□□ -0.8
Col6a5-201ENSMUST00000165165 Prmt9Q3U3W5 846 aa10.06□□□□□ -0.8
Col6a5-201ENSMUST00000165165 Trmt10cQ3UFY8 414 aaKnown RBP10.06□□□□□ -0.8
Col6a5-201ENSMUST00000165165 Armc2Q3URY6 854 aa10.06□□□□□ -0.8
Col6a5-201ENSMUST00000165165 Dmc1Q61880 340 aa10.06□□□□□ -0.8
Col6a5-201ENSMUST00000165165 Kbtbd3Q8BHI4 607 aa10.06□□□□□ -0.8
Col6a5-201ENSMUST00000165165 Aox4Q3TYQ9 1336 aa10.06□□□□□ -0.8
Col6a5-201ENSMUST00000165165 Ccdc24E9PUW8 296 aa10.06□□□□□ -0.8
Col6a5-201ENSMUST00000165165 Axin2O88566 840 aa10.06□□□□□ -0.8
Col6a5-201ENSMUST00000165165 Syt2P46097 422 aa10.06□□□□□ -0.8
Col6a5-201ENSMUST00000165165 Iqcb1Q8BP00 598 aa10.06□□□□□ -0.8
Col6a5-201ENSMUST00000165165 HnmtQ91VF2 295 aa10.06□□□□□ -0.8
Col6a5-201ENSMUST00000165165 GckrQ91X44 587 aa10.06□□□□□ -0.8
Col6a5-201ENSMUST00000165165 PawrQ925B0 333 aa10.06□□□□□ -0.8
Col6a5-201ENSMUST00000165165 ErmapQ9JLN5 566 aa10.06□□□□□ -0.8
Col6a5-201ENSMUST00000165165 RecqlQ9Z129 648 aa10.06□□□□□ -0.8
Col6a5-201ENSMUST00000165165 Plekhg4A0A1L1SU27 1217 aa10.06□□□□□ -0.8
Col6a5-201ENSMUST00000165165 Akr1b7P21300 316 aa10.06□□□□□ -0.8
Col6a5-201ENSMUST00000165165 Gtpbp6Q3U6U5 514 aa10.06□□□□□ -0.8
Col6a5-201ENSMUST00000165165 Snrnp27Q8K194 155 aa10.06□□□□□ -0.8
Col6a5-201ENSMUST00000165165 Gm21497A0A087WRK3 222 aa10.05□□□□□ -0.8
Col6a5-201ENSMUST00000165165 Krt72Q6IME9 520 aa10.05□□□□□ -0.8
Col6a5-201ENSMUST00000165165 Krt75Q8BGZ7 551 aa10.05□□□□□ -0.8
Col6a5-201ENSMUST00000165165 Myh11O08638 1972 aa10.05□□□□□ -0.8
Col6a5-201ENSMUST00000165165 Rbbp7Q60973 425 aaKnown RBP10.05□□□□□ -0.8
Col6a5-201ENSMUST00000165165 Ppp1r13bQ62415 1087 aa10.05□□□□□ -0.8
Col6a5-201ENSMUST00000165165 Arhgap26Q6ZQ82 814 aa10.05□□□□□ -0.8
Col6a5-201ENSMUST00000165165 PaoxQ8C0L6 504 aa10.05□□□□□ -0.8
Col6a5-201ENSMUST00000165165 Fam163aQ8CAA5 168 aa10.05□□□□□ -0.8
Col6a5-201ENSMUST00000165165 Prdm2A2A7B5 1709 aaKnown RBP10.05□□□□□ -0.8
Col6a5-201ENSMUST00000165165 MpndQ3TV65 487 aa10.05□□□□□ -0.8
Col6a5-201ENSMUST00000165165 Oxr1Q4KMM3 866 aa10.05□□□□□ -0.8
Col6a5-201ENSMUST00000165165 BcrQ6PAJ1 1270 aa10.05□□□□□ -0.8
Col6a5-201ENSMUST00000165165 Dnajc17Q91WT4 303 aa10.05□□□□□ -0.8
Col6a5-201ENSMUST00000165165 A2mQ6GQT1 1474 aa10.05□□□□□ -0.8
Col6a5-201ENSMUST00000165165 Ier5O89113 308 aa10.05□□□□□ -0.8
Col6a5-201ENSMUST00000165165 Dynlt1P51807 113 aa10.05□□□□□ -0.8
Col6a5-201ENSMUST00000165165 Utp18Q5SSI6 552 aaKnown RBP10.05□□□□□ -0.8
Col6a5-201ENSMUST00000165165 Ccdc90bQ8C3X2 256 aa10.05□□□□□ -0.8
Col6a5-201ENSMUST00000165165 Ccdc87Q8CDL9 855 aa10.05□□□□□ -0.8
Col6a5-201ENSMUST00000165165 Ipo11Q8K2V6 975 aa10.05□□□□□ -0.8
Col6a5-201ENSMUST00000165165 Dmap1Q9JI44 468 aa10.05□□□□□ -0.8
Col6a5-201ENSMUST00000165165 Fgd6Q69ZL1 1399 aa10.05□□□□□ -0.8
Col6a5-201ENSMUST00000165165 Exosc10P56960 887 aaKnown RBP10.05□□□□□ -0.8
Col6a5-201ENSMUST00000165165 Gabpb1Q00420 383 aa10.05□□□□□ -0.8
Col6a5-201ENSMUST00000165165 Zfp956Q3UZY6 572 aa10.05□□□□□ -0.8
Col6a5-201ENSMUST00000165165 Tmem232Q5K6N0 675 aa10.05□□□□□ -0.8
Col6a5-201ENSMUST00000165165 Rapgef6Q5NCJ1 1609 aa10.05□□□□□ -0.8
Col6a5-201ENSMUST00000165165 AmphQ7TQF7 686 aa10.05□□□□□ -0.8
Col6a5-201ENSMUST00000165165 Gimap5Q8BWF2 308 aa10.05□□□□□ -0.8
Col6a5-201ENSMUST00000165165 Gm11549A0A286YD83 63 aa10.05□□□□□ -0.8
Col6a5-201ENSMUST00000165165 Mettl17Q3U2U7 461 aa10.05□□□□□ -0.8
Col6a5-201ENSMUST00000165165 Ccdc84Q4VA36 332 aaKnown RBP10.05□□□□□ -0.8
Col6a5-201ENSMUST00000165165 Vps54Q5SPW0 977 aa10.05□□□□□ -0.8
Col6a5-201ENSMUST00000165165 Swi5Q8K3D3 89 aa10.05□□□□□ -0.8
Col6a5-201ENSMUST00000165165 Krt17Q9QWL7 433 aa10.05□□□□□ -0.8
Col6a5-201ENSMUST00000165165 Olfr310B2RVZ1 332 aa10.04□□□□□ -0.8
Col6a5-201ENSMUST00000165165 Gm8922F6XVS9 199 aa10.04□□□□□ -0.8
Col6a5-201ENSMUST00000165165 VdrP48281 422 aa10.04□□□□□ -0.8
Col6a5-201ENSMUST00000165165 Rbm46P86049 533 aa10.04□□□□□ -0.8
Col6a5-201ENSMUST00000165165 Ovgp1Q62010 721 aa10.04□□□□□ -0.8
Col6a5-201ENSMUST00000165165 Tbc1d30Q69ZT9 766 aa10.04□□□□□ -0.8
Col6a5-201ENSMUST00000165165 Nup107Q8BH74 926 aa10.04□□□□□ -0.8
Col6a5-201ENSMUST00000165165 Trip4Q9QXN3 581 aa10.04□□□□□ -0.8
Col6a5-201ENSMUST00000165165 Pik3c2gO70167 1506 aa10.04□□□□□ -0.8
Col6a5-201ENSMUST00000165165 Mmrn1B2RPV6 1210 aa10.04□□□□□ -0.8
Col6a5-201ENSMUST00000165165 Gimd1E9PW74 217 aa10.04□□□□□ -0.8
Col6a5-201ENSMUST00000165165 Zfp558E9Q1J0 407 aa10.04□□□□□ -0.8
Col6a5-201ENSMUST00000165165 Calb1P12658 261 aa10.04□□□□□ -0.8
Col6a5-201ENSMUST00000165165 Map2k2Q63932 401 aa10.04□□□□□ -0.8
Col6a5-201ENSMUST00000165165 GlyctkQ8QZY2 523 aa10.04□□□□□ -0.8
Col6a5-201ENSMUST00000165165 Stx18Q8VDS8 334 aa10.04□□□□□ -0.8
Col6a5-201ENSMUST00000165165 Q922C1 641 aa10.04□□□□□ -0.8
Col6a5-201ENSMUST00000165165 RtcbQ99LF4 505 aaKnown RBP10.04□□□□□ -0.8
Col6a5-201ENSMUST00000165165 Klc4Q9DBS5 619 aa10.04□□□□□ -0.8
Col6a5-201ENSMUST00000165165 Caskin1Q6P9K8 1431 aa10.04□□□□□ -0.8
Col6a5-201ENSMUST00000165165 Pagr1bF6V0H0 108 aa10.04□□□□□ -0.8
Col6a5-201ENSMUST00000165165 Tom1l2Q5SRX1 507 aa10.04□□□□□ -0.8
Col6a5-201ENSMUST00000165165 Bfsp2Q6NVD9 416 aa10.04□□□□□ -0.8
Col6a5-201ENSMUST00000165165 Otub1Q7TQI3 271 aa10.04□□□□□ -0.8
Col6a5-201ENSMUST00000165165 Pagr1aQ99L02 253 aa10.04□□□□□ -0.8
Retrieved 100 of 22,080 RNA–protein pairs in 91.4 ms