RNA–Protein interactions for RNA: ENSMUST00000115537.1

Col28a1-201, Transcript of Collagen alpha-1(XXVIII) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col28a1, Length 4,230 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col28a1-201ENSMUST00000115537 Pramel6Q810Y9 485 aa9.67□□□□□ -0.86
Col28a1-201ENSMUST00000115537 P3h4Q8K2B0 443 aa9.67□□□□□ -0.86
Col28a1-201ENSMUST00000115537 Vmn1r218Q8R261 298 aa9.67□□□□□ -0.86
Col28a1-201ENSMUST00000115537 Pcdhb22Q91XZ8 794 aa9.67□□□□□ -0.86
Col28a1-201ENSMUST00000115537 Abcf2Q99LE6 628 aaKnown RBP9.67□□□□□ -0.86
Col28a1-201ENSMUST00000115537 Smtnl1Q99LM3 459 aa9.67□□□□□ -0.86
Col28a1-201ENSMUST00000115537 Trim42Q9D2H5 723 aa9.67□□□□□ -0.86
Col28a1-201ENSMUST00000115537 Tlr9Q9EQU3 1032 aa9.67□□□□□ -0.86
Col28a1-201ENSMUST00000115537 Sipa1l2Q80TE4 1722 aa9.66□□□□□ -0.86
Col28a1-201ENSMUST00000115537 Ltbp4Q8K4G1 1666 aa9.66□□□□□ -0.86
Col28a1-201ENSMUST00000115537 Zdbf2Q5SS00 2493 aaKnown RBP9.66□□□□□ -0.86
Col28a1-201ENSMUST00000115537 Acad12D3Z7X0 555 aa9.66□□□□□ -0.86
Col28a1-201ENSMUST00000115537 Parp2O88554 559 aa9.66□□□□□ -0.86
Col28a1-201ENSMUST00000115537 Gdap1O88741 358 aa9.66□□□□□ -0.86
Col28a1-201ENSMUST00000115537 Gap43P06837 227 aa9.66□□□□□ -0.86
Col28a1-201ENSMUST00000115537 PpardP35396 440 aa9.66□□□□□ -0.86
Col28a1-201ENSMUST00000115537 Zfp781Q0P5U5 243 aa9.66□□□□□ -0.86
Col28a1-201ENSMUST00000115537 GmncQ3URY2 333 aa9.66□□□□□ -0.86
Col28a1-201ENSMUST00000115537 Lrrfip1Q3UZ39 729 aaKnown RBP9.66□□□□□ -0.86
Col28a1-201ENSMUST00000115537 CrkQ64010 304 aa9.66□□□□□ -0.86
Col28a1-201ENSMUST00000115537 Klhl29Q80T74 875 aa9.66□□□□□ -0.86
Col28a1-201ENSMUST00000115537 Phc3Q8CHP6 981 aa9.66□□□□□ -0.86
Col28a1-201ENSMUST00000115537 Spon1Q8VCC9 807 aa9.66□□□□□ -0.86
Col28a1-201ENSMUST00000115537 Ddx47Q9CWX9 455 aaKnown RBP9.66□□□□□ -0.86
Col28a1-201ENSMUST00000115537 Mphosph6Q9D1Q1 161 aa9.66□□□□□ -0.86
Col28a1-201ENSMUST00000115537 Diaph2O70566 1098 aa9.66□□□□□ -0.86
Col28a1-201ENSMUST00000115537 Ccdc51Q3URS9 406 aa9.66□□□□□ -0.86
Col28a1-201ENSMUST00000115537 Eps8l2Q99K30 729 aa9.66□□□□□ -0.86
Col28a1-201ENSMUST00000115537 HgsQ99LI8 775 aa9.66□□□□□ -0.86
Col28a1-201ENSMUST00000115537 Zfyve9A2A8R0 1397 aa9.66□□□□□ -0.86
Col28a1-201ENSMUST00000115537 MthfslL7N466 203 aa9.66□□□□□ -0.86
Col28a1-201ENSMUST00000115537 Becn2P0DM65 447 aa9.66□□□□□ -0.86
Col28a1-201ENSMUST00000115537 Aimp1P31230 310 aaKnown RBP9.66□□□□□ -0.86
Col28a1-201ENSMUST00000115537 Gas8Q60779 478 aa9.66□□□□□ -0.86
Col28a1-201ENSMUST00000115537 Atg9aQ68FE2 551 aa9.66□□□□□ -0.86
Col28a1-201ENSMUST00000115537 Anks6Q6GQX6 883 aa9.66□□□□□ -0.86
Col28a1-201ENSMUST00000115537 Ttc26Q8BS45 554 aa9.66□□□□□ -0.86
Col28a1-201ENSMUST00000115537 Ythdf3Q8BYK6 585 aaKnown RBP9.66□□□□□ -0.86
Col28a1-201ENSMUST00000115537 Kiaa1024Q8K3V7 917 aa9.66□□□□□ -0.86
Col28a1-201ENSMUST00000115537 Dnajc28Q8VCE1 385 aa9.66□□□□□ -0.86
Col28a1-201ENSMUST00000115537 Psmd2Q8VDM4 908 aa9.66□□□□□ -0.86
Col28a1-201ENSMUST00000115537 Ivns1abpQ920Q8 642 aa9.66□□□□□ -0.86
Col28a1-201ENSMUST00000115537 CutaQ9CQ89 177 aa9.66□□□□□ -0.86
Col28a1-201ENSMUST00000115537 Sos2Q02384 1333 aa9.66□□□□□ -0.86
Col28a1-201ENSMUST00000115537 Sik3Q6P4S6 1311 aa9.66□□□□□ -0.86
Col28a1-201ENSMUST00000115537 Npc1l1Q6T3U4 1333 aa9.66□□□□□ -0.86
Col28a1-201ENSMUST00000115537 Gm28360A0A087WR25 190 aa9.65□□□□□ -0.86
Col28a1-201ENSMUST00000115537 Zfand4D3Z3C6 739 aa9.65□□□□□ -0.86
Col28a1-201ENSMUST00000115537 Ssrp1Q08943 708 aaKnown RBP9.65□□□□□ -0.86
Col28a1-201ENSMUST00000115537 Gm2163Q6PCY5 473 aa9.65□□□□□ -0.86
Col28a1-201ENSMUST00000115537 Mrps5Q99N87 432 aaKnown RBP9.65□□□□□ -0.86
Col28a1-201ENSMUST00000115537 Mcur1Q9CXD6 340 aa9.65□□□□□ -0.86
Col28a1-201ENSMUST00000115537 Tfcp2Q9ERA0 502 aa9.65□□□□□ -0.86
Col28a1-201ENSMUST00000115537 Ankrd63A2ARS0 390 aa9.65□□□□□ -0.86
Col28a1-201ENSMUST00000115537 Ccdc170D3YXL0 722 aa9.65□□□□□ -0.86
Col28a1-201ENSMUST00000115537 Serpinb6eI7HJI3 429 aa9.65□□□□□ -0.86
Col28a1-201ENSMUST00000115537 CflarO35732 481 aa9.65□□□□□ -0.86
Col28a1-201ENSMUST00000115537 Usp53P15975 1069 aa9.65□□□□□ -0.86
Col28a1-201ENSMUST00000115537 Pde6bP23440 856 aa9.65□□□□□ -0.86
Col28a1-201ENSMUST00000115537 Arhgef16Q3U5C8 713 aa9.65□□□□□ -0.86
Col28a1-201ENSMUST00000115537 C87499Q3UX49 493 aa9.65□□□□□ -0.86
Col28a1-201ENSMUST00000115537 Senp6Q6P7W0 1132 aa9.65□□□□□ -0.86
Col28a1-201ENSMUST00000115537 Kdm1aQ6ZQ88 853 aa9.65□□□□□ -0.86
Col28a1-201ENSMUST00000115537 Tbc1d23Q8K0F1 684 aa9.65□□□□□ -0.86
Col28a1-201ENSMUST00000115537 Trappc12Q8K2L8 797 aa9.65□□□□□ -0.86
Col28a1-201ENSMUST00000115537 HibchQ8QZS1 385 aa9.65□□□□□ -0.86
Col28a1-201ENSMUST00000115537 Lman1lQ8VCD3 505 aa9.65□□□□□ -0.86
Col28a1-201ENSMUST00000115537 Haus2Q9CQS9 234 aa9.65□□□□□ -0.86
Col28a1-201ENSMUST00000115537 Tmed5Q9CXE7 229 aa9.65□□□□□ -0.86
Col28a1-201ENSMUST00000115537 Dynll2Q9D0M5 89 aa9.65□□□□□ -0.86
Col28a1-201ENSMUST00000115537 Tmod4Q9JLH8 345 aa9.65□□□□□ -0.86
Col28a1-201ENSMUST00000115537 Ano3A2AHL1 981 aa9.65□□□□□ -0.86
Col28a1-201ENSMUST00000115537 Etnk2A7MCT6 385 aa9.65□□□□□ -0.86
Col28a1-201ENSMUST00000115537 Apba1B2RUJ5 842 aa9.65□□□□□ -0.86
Col28a1-201ENSMUST00000115537 Rb1P13405 921 aa9.65□□□□□ -0.86
Col28a1-201ENSMUST00000115537 Fdx1P46656 188 aa9.65□□□□□ -0.86
Col28a1-201ENSMUST00000115537 Mybl1P51960 751 aa9.65□□□□□ -0.86
Col28a1-201ENSMUST00000115537 Epha2Q03145 977 aa9.65□□□□□ -0.86
Col28a1-201ENSMUST00000115537 Trpc6Q61143 930 aa9.65□□□□□ -0.86
Col28a1-201ENSMUST00000115537 Ddx3xQ62167 662 aaKnown RBP9.65□□□□□ -0.86
Col28a1-201ENSMUST00000115537 GnptabQ69ZN6 1235 aa9.65□□□□□ -0.86
Col28a1-201ENSMUST00000115537 Exoc3Q6KAR6 755 aa9.65□□□□□ -0.86
Col28a1-201ENSMUST00000115537 CntrobQ8CB62 887 aa9.65□□□□□ -0.86
Col28a1-201ENSMUST00000115537 Zcchc8Q9CYA6 709 aaKnown RBP9.65□□□□□ -0.86
Col28a1-201ENSMUST00000115537 Znf394Q9Z1D9 521 aa9.65□□□□□ -0.86
Col28a1-201ENSMUST00000115537 HelbQ6NVF4 1074 aa9.64□□□□□ -0.87
Col28a1-201ENSMUST00000115537 Papd7Q6PB75 542 aa9.64□□□□□ -0.87
Col28a1-201ENSMUST00000115537 Nod2Q8K3Z0 1020 aa9.64□□□□□ -0.87
Col28a1-201ENSMUST00000115537 Atp1a1Q8VDN2 1023 aaKnown RBP9.64□□□□□ -0.87
Col28a1-201ENSMUST00000115537 Pcdha5Q91Y15 934 aa9.64□□□□□ -0.87
Col28a1-201ENSMUST00000115537 Mis18aQ9CZJ6 204 aa9.64□□□□□ -0.87
Col28a1-201ENSMUST00000115537 Spc24Q9D083 201 aa9.64□□□□□ -0.87
Col28a1-201ENSMUST00000115537 Capn15Q9JLG8 1095 aa9.64□□□□□ -0.87
Col28a1-201ENSMUST00000115537 Krt90E9Q1Z0 538 aa9.64□□□□□ -0.87
Col28a1-201ENSMUST00000115537 Dnajb6O54946 365 aa9.64□□□□□ -0.87
Col28a1-201ENSMUST00000115537 Pde8aO88502 823 aa9.64□□□□□ -0.87
Col28a1-201ENSMUST00000115537 Serpina1bP22599 413 aa9.64□□□□□ -0.87
Col28a1-201ENSMUST00000115537 Hmgb1P63158 215 aaKnown RBP9.64□□□□□ -0.87
Col28a1-201ENSMUST00000115537 Meis3P97368 378 aa9.64□□□□□ -0.87
Col28a1-201ENSMUST00000115537 Lrrn2Q6PHP6 730 aa9.64□□□□□ -0.87
Retrieved 100 of 22,080 RNA–protein pairs in 17.4 ms