RNA–Protein interactions for RNA: ENSMUST00000053440.7

Ccdc40-202, Transcript of Coiled-coil domain-containing protein 40, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ccdc40, Length 3,524 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40-202ENSMUST00000053440 NfrkbQ6PIJ4 1296 aaKnown RBP10.83□□□□□ -0.68
Ccdc40-202ENSMUST00000053440 Pm20d1Q8C165 503 aa10.83□□□□□ -0.68
Ccdc40-202ENSMUST00000053440 TbcbQ9D1E6 244 aa10.83□□□□□ -0.68
Ccdc40-202ENSMUST00000053440 Bcl2l12Q9D3J3 255 aa10.83□□□□□ -0.68
Ccdc40-202ENSMUST00000053440 DgkiD3YWQ0 1071 aa10.82□□□□□ -0.68
Ccdc40-202ENSMUST00000053440 Rsbn1lD3Z0K6 821 aa10.82□□□□□ -0.68
Ccdc40-202ENSMUST00000053440 Rasa2P58069 847 aa10.82□□□□□ -0.68
Ccdc40-202ENSMUST00000053440 Tlr8P58682 1032 aa10.82□□□□□ -0.68
Ccdc40-202ENSMUST00000053440 Trim43aQ3TL54 445 aa10.82□□□□□ -0.68
Ccdc40-202ENSMUST00000053440 Rnf207Q3V3A7 635 aa10.82□□□□□ -0.68
Ccdc40-202ENSMUST00000053440 Pacsin1Q61644 441 aa10.82□□□□□ -0.68
Ccdc40-202ENSMUST00000053440 Znf771Q8BJ90 317 aa10.82□□□□□ -0.68
Ccdc40-202ENSMUST00000053440 Def6Q8C2K1 630 aa10.82□□□□□ -0.68
Ccdc40-202ENSMUST00000053440 Cdk17Q8K0D0 523 aa10.82□□□□□ -0.68
Ccdc40-202ENSMUST00000053440 Rnf34Q99KR6 376 aa10.82□□□□□ -0.68
Ccdc40-202ENSMUST00000053440 Coro7Q9D2V7 922 aa10.82□□□□□ -0.68
Ccdc40-202ENSMUST00000053440 AvenQ9D9K3 342 aa10.82□□□□□ -0.68
Ccdc40-202ENSMUST00000053440 Nfu1Q9QZ23 255 aa10.82□□□□□ -0.68
Ccdc40-202ENSMUST00000053440 Akr1b10G5E895 316 aa10.82□□□□□ -0.68
Ccdc40-202ENSMUST00000053440 Kcnma1Q08460 1209 aa10.82□□□□□ -0.68
Ccdc40-202ENSMUST00000053440 Slc2a13Q3UHK1 637 aa10.82□□□□□ -0.68
Ccdc40-202ENSMUST00000053440 Lrrc43Q3V0L5 667 aa10.82□□□□□ -0.68
Ccdc40-202ENSMUST00000053440 Ggt6Q6PDE7 497 aa10.82□□□□□ -0.68
Ccdc40-202ENSMUST00000053440 KhnynQ80U38 671 aa10.82□□□□□ -0.68
Ccdc40-202ENSMUST00000053440 Traf3ip3Q8C0G2 513 aa10.82□□□□□ -0.68
Ccdc40-202ENSMUST00000053440 Csgalnact2Q8C1F4 542 aa10.82□□□□□ -0.68
Ccdc40-202ENSMUST00000053440 Cdan1Q8CC12 1239 aa10.82□□□□□ -0.68
Ccdc40-202ENSMUST00000053440 Spata2Q8K004 515 aa10.82□□□□□ -0.68
Ccdc40-202ENSMUST00000053440 Ces1Q8VCC2 565 aa10.82□□□□□ -0.68
Ccdc40-202ENSMUST00000053440 Ube2sQ921J4 223 aa10.82□□□□□ -0.68
Ccdc40-202ENSMUST00000053440 Ears2Q9CXJ1 523 aa10.82□□□□□ -0.68
Ccdc40-202ENSMUST00000053440 Nxnl2Q9D531 156 aa10.82□□□□□ -0.68
Ccdc40-202ENSMUST00000053440 Dydc1Q9D9T0 175 aa10.82□□□□□ -0.68
Ccdc40-202ENSMUST00000053440 Jag1Q9QXX0 1218 aa10.82□□□□□ -0.68
Ccdc40-202ENSMUST00000053440 E9QMW4 1145 aa10.81□□□□□ -0.68
Ccdc40-202ENSMUST00000053440 MybP06876 636 aa10.81□□□□□ -0.68
Ccdc40-202ENSMUST00000053440 GscQ02591 256 aa10.81□□□□□ -0.68
Ccdc40-202ENSMUST00000053440 Fam183bQ5NC57 135 aa10.81□□□□□ -0.68
Ccdc40-202ENSMUST00000053440 Tsg101Q61187 391 aa10.81□□□□□ -0.68
Ccdc40-202ENSMUST00000053440 Ublcp1Q8BGR9 318 aa10.81□□□□□ -0.68
Ccdc40-202ENSMUST00000053440 Klhl7Q8BUL5 586 aa10.81□□□□□ -0.68
Ccdc40-202ENSMUST00000053440 Gpcpd1Q8C0L9 675 aa10.81□□□□□ -0.68
Ccdc40-202ENSMUST00000053440 Dnajc19Q9CQV7 116 aa10.81□□□□□ -0.68
Ccdc40-202ENSMUST00000053440 Mkrn1Q9QXP6 481 aa10.81□□□□□ -0.68
Ccdc40-202ENSMUST00000053440 Copb2O55029 905 aa10.81□□□□□ -0.68
Ccdc40-202ENSMUST00000053440 Gna15P30678 374 aa10.81□□□□□ -0.68
Ccdc40-202ENSMUST00000053440 Tmed8Q3UHI4 326 aa10.81□□□□□ -0.68
Ccdc40-202ENSMUST00000053440 Eme2Q56A04 373 aa10.81□□□□□ -0.68
Ccdc40-202ENSMUST00000053440 Ces1eQ64176 562 aa10.81□□□□□ -0.68
Ccdc40-202ENSMUST00000053440 Rexo1Q7TT28 1213 aa10.81□□□□□ -0.68
Ccdc40-202ENSMUST00000053440 GopcQ8BH60 463 aa10.81□□□□□ -0.68
Ccdc40-202ENSMUST00000053440 LgsnQ8CIX8 563 aa10.81□□□□□ -0.68
Ccdc40-202ENSMUST00000053440 Lzts2Q91YU6 671 aa10.81□□□□□ -0.68
Ccdc40-202ENSMUST00000053440 Krt34Q9D646 392 aa10.81□□□□□ -0.68
Ccdc40-202ENSMUST00000053440 CoasyQ9DBL7 563 aa10.81□□□□□ -0.68
Ccdc40-202ENSMUST00000053440 Akap8Q9DBR0 687 aaKnown RBP10.81□□□□□ -0.68
Ccdc40-202ENSMUST00000053440 Ybx3Q9JKB3 361 aaKnown RBP10.81□□□□□ -0.68
Ccdc40-202ENSMUST00000053440 Trim10Q9WUH5 489 aa10.81□□□□□ -0.68
Ccdc40-202ENSMUST00000053440 Orc1Q9Z1N2 840 aaKnown RBP10.81□□□□□ -0.68
Ccdc40-202ENSMUST00000053440 Hnrnph3D3Z3N4 346 aaKnown RBP10.81□□□□□ -0.68
Ccdc40-202ENSMUST00000053440 P4hbP09103 509 aaKnown RBP10.81□□□□□ -0.68
Ccdc40-202ENSMUST00000053440 Hsd17b1P51656 344 aa10.81□□□□□ -0.68
Ccdc40-202ENSMUST00000053440 Setd4P58467 439 aa10.81□□□□□ -0.68
Ccdc40-202ENSMUST00000053440 Sap30bpQ02614 308 aa10.81□□□□□ -0.68
Ccdc40-202ENSMUST00000053440 Tcerg1lQ3B807 590 aa10.81□□□□□ -0.68
Ccdc40-202ENSMUST00000053440 Zmym1Q3TJB1 983 aa10.81□□□□□ -0.68
Ccdc40-202ENSMUST00000053440 Psg29Q3URN6 468 aa10.81□□□□□ -0.68
Ccdc40-202ENSMUST00000053440 Acbd5Q5XG73 508 aa10.81□□□□□ -0.68
Ccdc40-202ENSMUST00000053440 Krt87Q6IMF0 495 aa10.81□□□□□ -0.68
Ccdc40-202ENSMUST00000053440 AopepQ8BXQ6 817 aa10.81□□□□□ -0.68
Ccdc40-202ENSMUST00000053440 IntS13Q8QZV7 732 aa10.81□□□□□ -0.68
Ccdc40-202ENSMUST00000053440 Klhl20Q8VCK5 604 aa10.81□□□□□ -0.68
Ccdc40-202ENSMUST00000053440 Smtnl1Q99LM3 459 aa10.81□□□□□ -0.68
Ccdc40-202ENSMUST00000053440 Lrrc57Q9D1G5 239 aa10.81□□□□□ -0.68
Ccdc40-202ENSMUST00000053440 Dydc2Q9D3X8 139 aa10.81□□□□□ -0.68
Ccdc40-202ENSMUST00000053440 GakQ99KY4 1305 aa10.81□□□□□ -0.68
Ccdc40-202ENSMUST00000053440 Gdf10P97737 476 aa10.8□□□□□ -0.68
Ccdc40-202ENSMUST00000053440 Fam107bQ3TGF2 131 aa10.8□□□□□ -0.68
Ccdc40-202ENSMUST00000053440 Ttbk2Q3UVR3 1243 aa10.8□□□□□ -0.68
Ccdc40-202ENSMUST00000053440 KynuQ9CXF0 464 aa10.8□□□□□ -0.68
Ccdc40-202ENSMUST00000053440 Nol7Q9D7Z3 254 aaKnown RBP10.8□□□□□ -0.68
Ccdc40-202ENSMUST00000053440 Sept14Q9DA97 430 aa10.8□□□□□ -0.68
Ccdc40-202ENSMUST00000053440 Mrpl12Q9DB15 201 aaKnown RBP10.8□□□□□ -0.68
Ccdc40-202ENSMUST00000053440 Tbx18Q9EPZ6 613 aa10.8□□□□□ -0.68
Ccdc40-202ENSMUST00000053440 Plch1Q4KWH5 1682 aa10.8□□□□□ -0.68
Ccdc40-202ENSMUST00000053440 Rbbp6P97868 1790 aaKnown RBP10.8□□□□□ -0.68
Ccdc40-202ENSMUST00000053440 Vmn2r78K7N6U5 853 aa10.8□□□□□ -0.68
Ccdc40-202ENSMUST00000053440 Guca2bO09051 106 aa10.8□□□□□ -0.68
Ccdc40-202ENSMUST00000053440 Sema3fO88632 785 aa10.8□□□□□ -0.68
Ccdc40-202ENSMUST00000053440 PltpP55065 493 aa10.8□□□□□ -0.68
Ccdc40-202ENSMUST00000053440 Dennd2aQ8C4S8 1000 aa10.8□□□□□ -0.68
Ccdc40-202ENSMUST00000053440 Zfp446Q8C9M8 523 aa10.8□□□□□ -0.68
Ccdc40-202ENSMUST00000053440 Six6os1Q9CTN5 574 aa10.8□□□□□ -0.68
Ccdc40-202ENSMUST00000053440 Ccdc89Q9DA73 370 aa10.8□□□□□ -0.68
Ccdc40-202ENSMUST00000053440 Zfp408H7BX78 710 aa10.8□□□□□ -0.68
Ccdc40-202ENSMUST00000053440 Krt18P05784 423 aa10.8□□□□□ -0.68
Ccdc40-202ENSMUST00000053440 Actn1Q7TPR4 892 aaKnown RBP10.8□□□□□ -0.68
Ccdc40-202ENSMUST00000053440 Bbs7Q8K2G4 715 aa10.8□□□□□ -0.68
Ccdc40-202ENSMUST00000053440 Rab3il1Q8VDV3 383 aa10.8□□□□□ -0.68
Ccdc40-202ENSMUST00000053440 Haus2Q9CQS9 234 aa10.8□□□□□ -0.68
Retrieved 100 of 22,080 RNA–protein pairs in 15 ms