RNA–Protein interactions for RNA: ENSMUST00000035164.9

Topbp1-201, Transcript of DNA topoisomerase 2-binding protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Topbp1, Length 5,224 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Topbp1-201ENSMUST00000035164 Hsd17b1P51656 344 aa12.42□□□□□ -0.42
Topbp1-201ENSMUST00000035164 GscQ02591 256 aa12.42□□□□□ -0.42
Topbp1-201ENSMUST00000035164 Nlrp4cQ3TKR3 982 aa12.42□□□□□ -0.42
Topbp1-201ENSMUST00000035164 Ccdc92bQ5SUE3 299 aa12.42□□□□□ -0.42
Topbp1-201ENSMUST00000035164 PolrmtQ8BKF1 1207 aaKnown RBP12.42□□□□□ -0.42
Topbp1-201ENSMUST00000035164 4921504E06RikQ8CET2 560 aa12.42□□□□□ -0.42
Topbp1-201ENSMUST00000035164 Pfkfb3A7UAK5 555 aa12.42□□□□□ -0.42
Topbp1-201ENSMUST00000035164 Celf1P28659 486 aaKnown RBP12.42□□□□□ -0.42
Topbp1-201ENSMUST00000035164 VrtnQ3SYK4 740 aa12.42□□□□□ -0.42
Topbp1-201ENSMUST00000035164 Git1Q68FF6 770 aa12.42□□□□□ -0.42
Topbp1-201ENSMUST00000035164 Gimap8Q75N62 688 aa12.42□□□□□ -0.42
Topbp1-201ENSMUST00000035164 SfpqQ8VIJ6 699 aaKnown RBP12.42□□□□□ -0.42
Topbp1-201ENSMUST00000035164 Gucy2fQ5SDA5 1108 aa12.41□□□□□ -0.42
Topbp1-201ENSMUST00000035164 Pramel6Q810Y9 485 aa12.41□□□□□ -0.42
Topbp1-201ENSMUST00000035164 Smim5Q8BT42 78 aa12.41□□□□□ -0.42
Topbp1-201ENSMUST00000035164 CoasyQ9DBL7 563 aa12.41□□□□□ -0.42
Topbp1-201ENSMUST00000035164 Serpina16D3Z660 418 aa12.41□□□□□ -0.42
Topbp1-201ENSMUST00000035164 Ap1b1O35643 943 aaKnown RBP12.41□□□□□ -0.42
Topbp1-201ENSMUST00000035164 Prl2c2P04095 224 aa12.41□□□□□ -0.42
Topbp1-201ENSMUST00000035164 Rc3h1Q4VGL6 1130 aaKnown RBP12.41□□□□□ -0.42
Topbp1-201ENSMUST00000035164 Kcna6Q61923 529 aa12.41□□□□□ -0.42
Topbp1-201ENSMUST00000035164 Myo6Q64331 1265 aa12.41□□□□□ -0.42
Topbp1-201ENSMUST00000035164 Adat2Q6P6J0 191 aa12.41□□□□□ -0.42
Topbp1-201ENSMUST00000035164 Shtn1Q8K2Q9 631 aa12.41□□□□□ -0.42
Topbp1-201ENSMUST00000035164 Trap1Q9CQN1 706 aaKnown RBP12.41□□□□□ -0.42
Topbp1-201ENSMUST00000035164 Serpinb12Q9D7P9 423 aa12.41□□□□□ -0.42
Topbp1-201ENSMUST00000035164 Trim80Q3V061 624 aa12.41□□□□□ -0.42
Topbp1-201ENSMUST00000035164 EregQ61521 162 aa12.41□□□□□ -0.42
Topbp1-201ENSMUST00000035164 Camsap3Q80VC9 1252 aa12.41□□□□□ -0.42
Topbp1-201ENSMUST00000035164 Epha10Q8BYG9 1007 aa12.41□□□□□ -0.42
Topbp1-201ENSMUST00000035164 Gpcpd1Q8C0L9 675 aa12.41□□□□□ -0.42
Topbp1-201ENSMUST00000035164 Eif3hQ91WK2 352 aaKnown RBP12.41□□□□□ -0.42
Topbp1-201ENSMUST00000035164 Eif4enif1Q9EST3 983 aaKnown RBP12.41□□□□□ -0.42
Topbp1-201ENSMUST00000035164 Cyth1Q9QX11 398 aa12.41□□□□□ -0.42
Topbp1-201ENSMUST00000035164 DexiQ9WUQ7 95 aa12.41□□□□□ -0.42
Topbp1-201ENSMUST00000035164 Stat2Q9WVL2 923 aa12.41□□□□□ -0.42
Topbp1-201ENSMUST00000035164 CluhQ5SW19 1315 aa12.41□□□□□ -0.42
Topbp1-201ENSMUST00000035164 CltcQ68FD5 1675 aaKnown RBP12.41□□□□□ -0.42
Topbp1-201ENSMUST00000035164 Zfyve27Q3TXX3 415 aa12.41□□□□□ -0.42
Topbp1-201ENSMUST00000035164 Pacsin1Q61644 441 aa12.41□□□□□ -0.42
Topbp1-201ENSMUST00000035164 Krt77Q6IFZ6 572 aa12.41□□□□□ -0.42
Topbp1-201ENSMUST00000035164 Celf4Q7TSY6 486 aa12.41□□□□□ -0.42
Topbp1-201ENSMUST00000035164 Rab44Q8CB87 725 aa12.41□□□□□ -0.42
Topbp1-201ENSMUST00000035164 Vmn1r218Q8R261 298 aa12.41□□□□□ -0.42
Topbp1-201ENSMUST00000035164 Pspc1Q8R326 523 aaKnown RBP12.41□□□□□ -0.42
Topbp1-201ENSMUST00000035164 Plagl2Q925T4 496 aa12.41□□□□□ -0.42
Topbp1-201ENSMUST00000035164 Lrp2bpQ9D4C6 346 aa12.41□□□□□ -0.42
Topbp1-201ENSMUST00000035164 Ccdc182Q9D9C6 152 aa12.41□□□□□ -0.42
Topbp1-201ENSMUST00000035164 Nwd1A6H603 1563 aa12.41□□□□□ -0.42
Topbp1-201ENSMUST00000035164 Folh1O35409 752 aa12.4□□□□□ -0.42
Topbp1-201ENSMUST00000035164 PcQ05920 1178 aa12.4□□□□□ -0.42
Topbp1-201ENSMUST00000035164 Vps41Q5KU39 853 aa12.4□□□□□ -0.42
Topbp1-201ENSMUST00000035164 Foxo6Q70KY4 559 aa12.4□□□□□ -0.42
Topbp1-201ENSMUST00000035164 Bank1Q80VH0 783 aa12.4□□□□□ -0.42
Topbp1-201ENSMUST00000035164 Kiaa1024Q8K3V7 917 aa12.4□□□□□ -0.42
Topbp1-201ENSMUST00000035164 MymkQ9D1N4 221 aa12.4□□□□□ -0.42
Topbp1-201ENSMUST00000035164 Gm6121L7MUF1 212 aa12.4□□□□□ -0.42
Topbp1-201ENSMUST00000035164 BC051142Q3V0M8 400 aa12.4□□□□□ -0.42
Topbp1-201ENSMUST00000035164 Klra4Q60651 263 aa12.4□□□□□ -0.42
Topbp1-201ENSMUST00000035164 Snx24Q9CRB0 169 aa12.4□□□□□ -0.42
Topbp1-201ENSMUST00000035164 H2afzP0C0S6 128 aa12.4□□□□□ -0.42
Topbp1-201ENSMUST00000035164 Gjb6P70689 261 aa12.4□□□□□ -0.42
Topbp1-201ENSMUST00000035164 H2afvQ3THW5 128 aa12.4□□□□□ -0.42
Topbp1-201ENSMUST00000035164 Aak1Q3UHJ0 959 aa12.4□□□□□ -0.42
Topbp1-201ENSMUST00000035164 MaeaQ4VC33 396 aa12.4□□□□□ -0.42
Topbp1-201ENSMUST00000035164 Gm5169Q5M8P2 212 aa12.4□□□□□ -0.42
Topbp1-201ENSMUST00000035164 Ccdc87Q8CDL9 855 aa12.4□□□□□ -0.42
Topbp1-201ENSMUST00000035164 Ccdc28aQ8CEI3 192 aa12.4□□□□□ -0.42
Topbp1-201ENSMUST00000035164 Mmgt1Q8K273 131 aaKnown RBP12.4□□□□□ -0.42
Topbp1-201ENSMUST00000035164 Herc3A6H6S0 1050 aa12.4□□□□□ -0.43
Topbp1-201ENSMUST00000035164 Cep126Q0VBV7 1103 aa12.4□□□□□ -0.43
Topbp1-201ENSMUST00000035164 Nlrx1Q3TL44 975 aa12.4□□□□□ -0.43
Topbp1-201ENSMUST00000035164 Cyfip2Q5SQX6 1253 aa12.4□□□□□ -0.43
Topbp1-201ENSMUST00000035164 PicalmQ7M6Y3 660 aaKnown RBP12.4□□□□□ -0.43
Topbp1-201ENSMUST00000035164 Yars2Q8BYL4 472 aaKnown RBP12.4□□□□□ -0.43
Topbp1-201ENSMUST00000035164 Lrrc14Q8VC16 493 aa12.4□□□□□ -0.43
Topbp1-201ENSMUST00000035164 Ces1Q8VCC2 565 aa12.4□□□□□ -0.43
Topbp1-201ENSMUST00000035164 Camta1A2A891 1682 aa12.39□□□□□ -0.43
Topbp1-201ENSMUST00000035164 Nup153E9Q3G8 1462 aaKnown RBP12.39□□□□□ -0.43
Topbp1-201ENSMUST00000035164 RpsaP14206 295 aaKnown RBP12.39□□□□□ -0.43
Topbp1-201ENSMUST00000035164 Myo19Q5SV80 963 aa12.39□□□□□ -0.43
Topbp1-201ENSMUST00000035164 Actn1Q7TPR4 892 aaKnown RBP12.39□□□□□ -0.43
Topbp1-201ENSMUST00000035164 Acbd3Q8BMP6 525 aa12.39□□□□□ -0.43
Topbp1-201ENSMUST00000035164 Znrd1-asQ8R0E5 213 aa12.39□□□□□ -0.43
Topbp1-201ENSMUST00000035164 Thoc1Q8R3N6 657 aaKnown RBP12.39□□□□□ -0.43
Topbp1-201ENSMUST00000035164 Trub2Q91WG3 331 aaKnown RBP12.39□□□□□ -0.43
Topbp1-201ENSMUST00000035164 Cd2apQ9JLQ0 637 aa12.39□□□□□ -0.43
Topbp1-201ENSMUST00000035164 Kif1aP33173 1695 aa12.39□□□□□ -0.43
Topbp1-201ENSMUST00000035164 Diaph2O70566 1098 aa12.39□□□□□ -0.43
Topbp1-201ENSMUST00000035164 Nr2f2P43135 414 aa12.39□□□□□ -0.43
Topbp1-201ENSMUST00000035164 Meis1Q60954 390 aa12.39□□□□□ -0.43
Topbp1-201ENSMUST00000035164 StilQ60988 1262 aa12.39□□□□□ -0.43
Topbp1-201ENSMUST00000035164 Nlrp4fQ66X05 959 aa12.39□□□□□ -0.43
Topbp1-201ENSMUST00000035164 Ube2sQ921J4 223 aa12.39□□□□□ -0.43
Topbp1-201ENSMUST00000035164 Rreb1Q3UH06 1700 aaKnown RBP12.39□□□□□ -0.43
Topbp1-201ENSMUST00000035164 Znf667Q2TL60 609 aa12.39□□□□□ -0.43
Topbp1-201ENSMUST00000035164 Prpf38aQ4FK66 312 aaKnown RBP12.39□□□□□ -0.43
Topbp1-201ENSMUST00000035164 Sema4bQ62179 823 aa12.39□□□□□ -0.43
Topbp1-201ENSMUST00000035164 AbraQ8BUZ1 375 aa12.39□□□□□ -0.43
Topbp1-201ENSMUST00000035164 Sde2Q8K1J5 448 aaKnown RBP12.39□□□□□ -0.43
Retrieved 100 of 22,080 RNA–protein pairs in 18.4 ms