RNA–Protein interactions for RNA: ENSMUST00000013771.14

Trim54-201, Transcript of Tripartite motif-containing protein 54, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Trim54, Length 1,434 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim54-201ENSMUST00000013771 SfnO70456 248 aaKnown RBP19.5■□□□□ 0.71
Trim54-201ENSMUST00000013771 Tmtc2Q56A06 836 aa19.5■□□□□ 0.71
Trim54-201ENSMUST00000013771 Jakmip3Q5DTN8 844 aa19.5■□□□□ 0.71
Trim54-201ENSMUST00000013771 Actn1Q7TPR4 892 aaKnown RBP19.5■□□□□ 0.71
Trim54-201ENSMUST00000013771 Ppfibp1Q8C8U0 969 aaKnown RBP19.5■□□□□ 0.71
Trim54-201ENSMUST00000013771 Ccdc15Q8C9M2 810 aa19.5■□□□□ 0.71
Trim54-201ENSMUST00000013771 Tmem191cQ9JJB1 302 aa19.5■□□□□ 0.71
Trim54-201ENSMUST00000013771 Mlh1Q9JK91 760 aa19.5■□□□□ 0.71
Trim54-201ENSMUST00000013771 Mad1l1Q9WTX8 717 aaKnown RBP19.5■□□□□ 0.71
Trim54-201ENSMUST00000013771 Ces1hD3Z298 562 aa19.49■□□□□ 0.71
Trim54-201ENSMUST00000013771 Nlrx1Q3TL44 975 aa19.49■□□□□ 0.71
Trim54-201ENSMUST00000013771 NcaphQ8C156 731 aa19.49■□□□□ 0.71
Trim54-201ENSMUST00000013771 Fermt2Q8CIB5 680 aa19.49■□□□□ 0.71
Trim54-201ENSMUST00000013771 Acat1Q8QZT1 424 aa19.49■□□□□ 0.71
Trim54-201ENSMUST00000013771 Trpv6Q91WD2 767 aa19.49■□□□□ 0.71
Trim54-201ENSMUST00000013771 PrelpQ9JK53 378 aa19.49■□□□□ 0.71
Trim54-201ENSMUST00000013771 Tbkbp1A2A9T0 611 aa19.48■□□□□ 0.71
Trim54-201ENSMUST00000013771 Taf1bP97358 586 aa19.48■□□□□ 0.71
Trim54-201ENSMUST00000013771 Syce2Q505B8 171 aa19.48■□□□□ 0.71
Trim54-201ENSMUST00000013771 ScapQ6GQT6 1276 aa19.48■□□□□ 0.71
Trim54-201ENSMUST00000013771 Crb2Q80YA8 1282 aa19.48■□□□□ 0.71
Trim54-201ENSMUST00000013771 Atp2a1Q8R429 994 aa19.48■□□□□ 0.71
Trim54-201ENSMUST00000013771 Rbm10Q99KG3 930 aaKnown RBP19.48■□□□□ 0.71
Trim54-201ENSMUST00000013771 Galntl5Q9D4M9 431 aa19.48■□□□□ 0.71
Trim54-201ENSMUST00000013771 Gm4758L7N258 96 aa19.47■□□□□ 0.71
Trim54-201ENSMUST00000013771 GnaqP21279 359 aa19.47■□□□□ 0.71
Trim54-201ENSMUST00000013771 Gtf2a2Q80ZM7 109 aa19.47■□□□□ 0.71
Trim54-201ENSMUST00000013771 Cep55Q8BT07 462 aa19.47■□□□□ 0.71
Trim54-201ENSMUST00000013771 Ccdc158Q8CDI6 1109 aa19.47■□□□□ 0.71
Trim54-201ENSMUST00000013771 Celf3Q8CIN6 465 aa19.47■□□□□ 0.71
Trim54-201ENSMUST00000013771 Dcaf8Q8N7N5 591 aa19.47■□□□□ 0.71
Trim54-201ENSMUST00000013771 Lzts2Q91YU6 671 aa19.47■□□□□ 0.71
Trim54-201ENSMUST00000013771 Atp6ap2Q9CYN9 350 aa19.47■□□□□ 0.71
Trim54-201ENSMUST00000013771 Pus10Q9D3U0 527 aa19.47■□□□□ 0.71
Trim54-201ENSMUST00000013771 Trpm5Q9JJH7 1158 aa19.47■□□□□ 0.71
Trim54-201ENSMUST00000013771 Irgm2A0A140LIF8 407 aa19.46■□□□□ 0.71
Trim54-201ENSMUST00000013771 DgkhD3YXJ0 1156 aa19.46■□□□□ 0.71
Trim54-201ENSMUST00000013771 Gm10093D3YYI8 482 aa19.46■□□□□ 0.71
Trim54-201ENSMUST00000013771 Hdac1O09106 482 aaKnown RBP19.46■□□□□ 0.71
Trim54-201ENSMUST00000013771 Pdia3P27773 505 aaKnown RBP19.46■□□□□ 0.71
Trim54-201ENSMUST00000013771 Kcnn2P58390 839 aa19.46■□□□□ 0.71
Trim54-201ENSMUST00000013771 RubcnlQ3TD16 648 aa19.46■□□□□ 0.71
Trim54-201ENSMUST00000013771 Cwf19l2Q8BG79 887 aaKnown RBP19.46■□□□□ 0.71
Trim54-201ENSMUST00000013771 Dis3lQ8C0S1 1053 aa19.46■□□□□ 0.71
Trim54-201ENSMUST00000013771 Atg13Q91YI1 516 aa19.46■□□□□ 0.71
Trim54-201ENSMUST00000013771 Cul5Q9D5V5 780 aa19.46■□□□□ 0.71
Trim54-201ENSMUST00000013771 Calm1P0DP26 149 aaKnown RBP19.45■□□□□ 0.7
Trim54-201ENSMUST00000013771 Calm2P0DP27 149 aaKnown RBP19.45■□□□□ 0.7
Trim54-201ENSMUST00000013771 Calm3P0DP28 149 aaKnown RBP19.45■□□□□ 0.7
Trim54-201ENSMUST00000013771 RabggtbP53612 339 aa19.45■□□□□ 0.7
Trim54-201ENSMUST00000013771 Sox1P53783 391 aa19.45■□□□□ 0.7
Trim54-201ENSMUST00000013771 Gdf10P97737 476 aa19.45■□□□□ 0.7
Trim54-201ENSMUST00000013771 ZbbxQ0P5X5 716 aa19.45■□□□□ 0.7
Trim54-201ENSMUST00000013771 Smarcc2Q6PDG5 1213 aa19.45■□□□□ 0.7
Trim54-201ENSMUST00000013771 SltmQ8CH25 1031 aaKnown RBP19.45■□□□□ 0.7
Trim54-201ENSMUST00000013771 Adcy3Q8VHH7 1145 aa19.45■□□□□ 0.7
Trim54-201ENSMUST00000013771 Grin3bQ91ZU9 1003 aa19.45■□□□□ 0.7
Trim54-201ENSMUST00000013771 Tas1r1Q99PG6 842 aa19.45■□□□□ 0.7
Trim54-201ENSMUST00000013771 Susd3Q9D176 269 aa19.45■□□□□ 0.7
Trim54-201ENSMUST00000013771 Nek4Q9Z1J2 792 aa19.45■□□□□ 0.7
Trim54-201ENSMUST00000013771 Cep290Q6A078 2472 aa19.45■□□□□ 0.7
Trim54-201ENSMUST00000013771 Dnai2A2AC93 623 aa19.44■□□□□ 0.7
Trim54-201ENSMUST00000013771 Gucy1a2F8VQK3 730 aa19.44■□□□□ 0.7
Trim54-201ENSMUST00000013771 Rnf207Q3V3A7 635 aa19.44■□□□□ 0.7
Trim54-201ENSMUST00000013771 Carmil2Q3V3V9 1296 aa19.44■□□□□ 0.7
Trim54-201ENSMUST00000013771 Galnt17Q7TT15 598 aa19.44■□□□□ 0.7
Trim54-201ENSMUST00000013771 Bmp3Q8BHE5 468 aa19.44■□□□□ 0.7
Trim54-201ENSMUST00000013771 Triml1Q8BVP1 470 aa19.44■□□□□ 0.7
Trim54-201ENSMUST00000013771 Prrg2Q8R182 198 aa19.44■□□□□ 0.7
Trim54-201ENSMUST00000013771 Ddx39aQ8VDW0 427 aaKnown RBP19.44■□□□□ 0.7
Trim54-201ENSMUST00000013771 Nxf1Q99JX7 618 aaKnown RBP19.44■□□□□ 0.7
Trim54-201ENSMUST00000013771 Rassf3Q99P51 232 aa19.44■□□□□ 0.7
Trim54-201ENSMUST00000013771 Pgap3A2A559 320 aa19.43■□□□□ 0.7
Trim54-201ENSMUST00000013771 Rnf20Q5DTM8 973 aa19.43■□□□□ 0.7
Trim54-201ENSMUST00000013771 Gm11487Q5RIS0 354 aa19.43■□□□□ 0.7
Trim54-201ENSMUST00000013771 Dalrd3Q6PJN8 538 aa19.43■□□□□ 0.7
Trim54-201ENSMUST00000013771 ClmnQ8C5W0 1052 aa19.43■□□□□ 0.7
Trim54-201ENSMUST00000013771 Cdan1Q8CC12 1239 aa19.43■□□□□ 0.7
Trim54-201ENSMUST00000013771 Agbl3Q8CDP0 1006 aa19.43■□□□□ 0.7
Trim54-201ENSMUST00000013771 Gpr108Q91WD0 569 aa19.43■□□□□ 0.7
Trim54-201ENSMUST00000013771 Ttc9bQ9D6E4 239 aa19.43■□□□□ 0.7
Trim54-201ENSMUST00000013771 Cnpy3Q9DAU1 276 aa19.43■□□□□ 0.7
Trim54-201ENSMUST00000013771 Cep350E9Q309 3095 aa19.43■□□□□ 0.7
Trim54-201ENSMUST00000013771 Cnnm3Q32NY4 713 aa19.42■□□□□ 0.7
Trim54-201ENSMUST00000013771 PtprcapQ64697 197 aa19.42■□□□□ 0.7
Trim54-201ENSMUST00000013771 Crtc1Q68ED7 630 aa19.42■□□□□ 0.7
Trim54-201ENSMUST00000013771 Tnpo1Q8BFY9 898 aaKnown RBP19.42■□□□□ 0.7
Trim54-201ENSMUST00000013771 DymQ8CHY3 669 aa19.42■□□□□ 0.7
Trim54-201ENSMUST00000013771 Adam33Q923W9 797 aa19.42■□□□□ 0.7
Trim54-201ENSMUST00000013771 Col25a1Q99MQ5 666 aa19.42■□□□□ 0.7
Trim54-201ENSMUST00000013771 1700129C05RikQ9CQ77 218 aa19.42■□□□□ 0.7
Trim54-201ENSMUST00000013771 Lrrc46Q9DAP0 323 aa19.42■□□□□ 0.7
Trim54-201ENSMUST00000013771 Eif4e3Q9DBB5 207 aa19.42■□□□□ 0.7
Trim54-201ENSMUST00000013771 Slc5a4aQ9ET37 656 aa19.42■□□□□ 0.7
Trim54-201ENSMUST00000013771 Acox2Q9QXD1 681 aa19.42■□□□□ 0.7
Trim54-201ENSMUST00000013771 Pmfbp1Q9WVQ0 1022 aa19.42■□□□□ 0.7
Trim54-201ENSMUST00000013771 Klhl34A2AI76 644 aa19.42■□□□□ 0.7
Trim54-201ENSMUST00000013771 Gm4788E9Q8B5 879 aa19.42■□□□□ 0.7
Trim54-201ENSMUST00000013771 Axin1O35625 863 aa19.42■□□□□ 0.7
Trim54-201ENSMUST00000013771 P01644 108 aa19.42■□□□□ 0.7
Retrieved 100 of 22,080 RNA–protein pairs in 31.2 ms