RNA–Protein interactions for RNA: ENST00000640501.1

PNKP-231, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 151 nt, Biotype non stop decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-231ENST00000640501 RASGRP2Q7LDG7 609 aa9.31□□□□□ -0.92
PNKP-231ENST00000640501 MCF2L2Q86YR7 1114 aa9.31□□□□□ -0.92
PNKP-231ENST00000640501 TRMT44Q8IYL2 757 aaKnown RBP9.31□□□□□ -0.92
PNKP-231ENST00000640501 ADSSL1Q8N142 457 aa9.31□□□□□ -0.92
PNKP-231ENST00000640501 TRIM47Q96LD4 638 aa9.31□□□□□ -0.92
PNKP-231ENST00000640501 TRIM9Q9C026 710 aa9.31□□□□□ -0.92
PNKP-231ENST00000640501 AS3MTQ9HBK9 375 aa9.31□□□□□ -0.92
PNKP-231ENST00000640501 MAP3K20Q9NYL2 800 aaKnown RBP9.31□□□□□ -0.92
PNKP-231ENST00000640501 LIMA1Q9UHB6 759 aaKnown RBP9.31□□□□□ -0.92
PNKP-231ENST00000640501 PRR12Q9ULL5 1215 aa9.31□□□□□ -0.92
PNKP-231ENST00000640501 PCDHAC2Q9Y5I4 1007 aa9.31□□□□□ -0.92
PNKP-231ENST00000640501 CNTNAP1P78357 1384 aa9.31□□□□□ -0.92
PNKP-231ENST00000640501 AKR1B15C9JRZ8 316 aaPredicted RBP9.3□□□□□ -0.92
PNKP-231ENST00000640501 GCOM1H8Y6P7 765 aaPredicted RBP9.3□□□□□ -0.92
PNKP-231ENST00000640501 DYNC1I1O14576 645 aa9.3□□□□□ -0.92
PNKP-231ENST00000640501 N4BP3O15049 544 aa9.3□□□□□ -0.92
PNKP-231ENST00000640501 WDR46O15213 610 aaKnown RBP9.3□□□□□ -0.92
PNKP-231ENST00000640501 PPP1R11O60927 126 aaPredicted RBP9.3□□□□□ -0.92
PNKP-231ENST00000640501 ZBTB7AO95365 584 aa9.3□□□□□ -0.92
PNKP-231ENST00000640501 POLR2MP0CAP2 368 aa9.3□□□□□ -0.92
PNKP-231ENST00000640501 TNNT1P13805 278 aa9.3□□□□□ -0.92
PNKP-231ENST00000640501 CCNE1P24864 410 aa9.3□□□□□ -0.92
PNKP-231ENST00000640501 CDC25AP30304 524 aa9.3□□□□□ -0.92
PNKP-231ENST00000640501 CCT6AP40227 531 aaKnown RBP9.3□□□□□ -0.92
PNKP-231ENST00000640501 ZNF280AP59817 542 aaPredicted RBP9.3□□□□□ -0.92
PNKP-231ENST00000640501 CCZ1BP86790 482 aa9.3□□□□□ -0.92
PNKP-231ENST00000640501 CCZ1P86791 482 aaPredicted RBP9.3□□□□□ -0.92
PNKP-231ENST00000640501 ARHGAP4P98171 946 aa9.3□□□□□ -0.92
PNKP-231ENST00000640501 MAP3K10Q02779 954 aa9.3□□□□□ -0.92
PNKP-231ENST00000640501 FMR1Q06787 632 aaKnown RBP eCLIP9.3□□□□□ -0.92
PNKP-231ENST00000640501 LRMPQ12912 555 aa9.3□□□□□ -0.92
PNKP-231ENST00000640501 NR1I3Q14994 352 aa9.3□□□□□ -0.92
PNKP-231ENST00000640501 USH1GQ495M9 461 aa9.3□□□□□ -0.92
PNKP-231ENST00000640501 NAALADL2Q58DX5 795 aa9.3□□□□□ -0.92
PNKP-231ENST00000640501 KRT26Q7Z3Y9 468 aa9.3□□□□□ -0.92
PNKP-231ENST00000640501 MTERF4Q7Z6M4 381 aaKnown RBP9.3□□□□□ -0.92
PNKP-231ENST00000640501 APOBEC3FQ8IUX4 373 aaKnown RBP9.3□□□□□ -0.92
PNKP-231ENST00000640501 CCDC65Q8IXS2 484 aa9.3□□□□□ -0.92
PNKP-231ENST00000640501 RAD54LQ92698 747 aa9.3□□□□□ -0.92
PNKP-231ENST00000640501 STAMQ92783 540 aa9.3□□□□□ -0.92
PNKP-231ENST00000640501 ZBED3Q96IU2 234 aaPredicted RBP9.3□□□□□ -0.92
PNKP-231ENST00000640501 MBOAT7Q96N66 472 aa9.3□□□□□ -0.92
PNKP-231ENST00000640501 PANX2Q96RD6 677 aa9.3□□□□□ -0.92
PNKP-231ENST00000640501 BAG1Q99933 345 aaPredicted RBP9.3□□□□□ -0.92
PNKP-231ENST00000640501 HSD3B7Q9H2F3 369 aa9.3□□□□□ -0.92
PNKP-231ENST00000640501 SAMSN1Q9NSI8 373 aaKnown RBP9.3□□□□□ -0.92
PNKP-231ENST00000640501 PPP1R1BQ9UD71 204 aaPredicted RBP9.3□□□□□ -0.92
PNKP-231ENST00000640501 ZBTB12Q9Y330 459 aaPredicted RBP9.3□□□□□ -0.92
PNKP-231ENST00000640501 ATAD5Q96QE3 1844 aa9.3□□□□□ -0.92
PNKP-231ENST00000640501 MYH7BA7E2Y1 1941 aa9.29□□□□□ -0.92
PNKP-231ENST00000640501 LRRC10BA6NIK2 292 aa9.29□□□□□ -0.92
PNKP-231ENST00000640501 PP2D1A8MPX8 630 aa9.29□□□□□ -0.92
PNKP-231ENST00000640501 KCNJ18B7U540 433 aa9.29□□□□□ -0.92
PNKP-231ENST00000640501 USP17L15C9J2P7 530 aa9.29□□□□□ -0.92
PNKP-231ENST00000640501 USP17L13C9JLJ4 530 aa9.29□□□□□ -0.92
PNKP-231ENST00000640501 USP17L11C9JVI0 530 aa9.29□□□□□ -0.92
PNKP-231ENST00000640501 USP17L18D6R9N7 530 aa9.29□□□□□ -0.92
PNKP-231ENST00000640501 USP17L22D6RA61 530 aa9.29□□□□□ -0.92
PNKP-231ENST00000640501 USP17L17D6RBQ6 530 aa9.29□□□□□ -0.92
PNKP-231ENST00000640501 USP17L19D6RCP7 530 aa9.29□□□□□ -0.92
PNKP-231ENST00000640501 USP17L20D6RJB6 530 aa9.29□□□□□ -0.92
PNKP-231ENST00000640501 WNT10BO00744 389 aa9.29□□□□□ -0.92
PNKP-231ENST00000640501 MEIS2O14770 477 aa9.29□□□□□ -0.92
PNKP-231ENST00000640501 ADAMTS3O15072 1205 aa9.29□□□□□ -0.92
PNKP-231ENST00000640501 SLC37A4O43826 429 aa9.29□□□□□ -0.92
PNKP-231ENST00000640501 CTNND1O60716 968 aaKnown RBP9.29□□□□□ -0.92
PNKP-231ENST00000640501 KRT18P05783 430 aaKnown RBP9.29□□□□□ -0.92
PNKP-231ENST00000640501 CYP3A4P08684 503 aa9.29□□□□□ -0.92
PNKP-231ENST00000640501 MUTP22033 750 aa9.29□□□□□ -0.92
PNKP-231ENST00000640501 CIITAP33076 1130 aa9.29□□□□□ -0.92
PNKP-231ENST00000640501 PRCPP42785 496 aa9.29□□□□□ -0.92
PNKP-231ENST00000640501 STX17P56962 302 aa9.29□□□□□ -0.92
PNKP-231ENST00000640501 SETQ01105 290 aaPredicted RBP9.29□□□□□ -0.92
PNKP-231ENST00000640501 LRRC63Q05C16 580 aa9.29□□□□□ -0.92
PNKP-231ENST00000640501 USP17L24Q0WX57 530 aa9.29□□□□□ -0.92
PNKP-231ENST00000640501 KCNJ12Q14500 433 aa9.29□□□□□ -0.92
PNKP-231ENST00000640501 TMEM119Q4V9L6 283 aa9.29□□□□□ -0.92
PNKP-231ENST00000640501 TCP11X2Q5H9J9 407 aa9.29□□□□□ -0.92
PNKP-231ENST00000640501 HYIQ5T013 277 aa9.29□□□□□ -0.92
PNKP-231ENST00000640501 FAM83BQ5T0W9 1011 aa9.29□□□□□ -0.92
PNKP-231ENST00000640501 FKBP15Q5T1M5 1219 aa9.29□□□□□ -0.92
PNKP-231ENST00000640501 CEP135Q66GS9 1140 aa9.29□□□□□ -0.92
PNKP-231ENST00000640501 USP17L6PQ6QN14 398 aa9.29□□□□□ -0.92
PNKP-231ENST00000640501 SIAH1Q8IUQ4 282 aa9.29□□□□□ -0.92
PNKP-231ENST00000640501 CCAR2Q8N163 923 aaKnown RBP9.29□□□□□ -0.92
PNKP-231ENST00000640501 CSGALNACT2Q8N6G5 542 aa9.29□□□□□ -0.92
PNKP-231ENST00000640501 MYRIPQ8NFW9 859 aa9.29□□□□□ -0.92
PNKP-231ENST00000640501 KIF18AQ8NI77 898 aa9.29□□□□□ -0.92
PNKP-231ENST00000640501 P2RX5Q93086 422 aa9.29□□□□□ -0.92
PNKP-231ENST00000640501 NUP58Q9BVL2 599 aa9.29□□□□□ -0.92
PNKP-231ENST00000640501 RANBP17Q9H2T7 1088 aaKnown RBP9.29□□□□□ -0.92
PNKP-231ENST00000640501 KCNMB3Q9NPA1 279 aa9.29□□□□□ -0.92
PNKP-231ENST00000640501 ADD3Q9UEY8 706 aaKnown RBP9.29□□□□□ -0.92
PNKP-231ENST00000640501 BCS1LQ9Y276 419 aa9.29□□□□□ -0.92
PNKP-231ENST00000640501 PPP2R3BQ9Y5P8 575 aa9.29□□□□□ -0.92
PNKP-231ENST00000640501 UQCRHLA0A096LP55 91 aa9.28□□□□□ -0.92
PNKP-231ENST00000640501 A0A1W2PQC6 194 aa9.28□□□□□ -0.92
PNKP-231ENST00000640501 GNA14O95837 355 aa9.28□□□□□ -0.92
PNKP-231ENST00000640501 UQCRHP07919 91 aa9.28□□□□□ -0.92
PNKP-231ENST00000640501 CD44P16070 742 aaKnown RBP9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms