RNA–Protein interactions for RNA: ENST00000640408.1

RTTN-218, Transcript of rotatin, humanhuman

TSL 5

Gene RTTN, Length 5,589 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTTN-218ENST00000640408 NCAPG2Q86XI2 1143 aa6.32□□□□□ -1.4
RTTN-218ENST00000640408 CTAGE4Q8IX94 777 aa6.32□□□□□ -1.4
RTTN-218ENST00000640408 MB21D2Q8IYB1 491 aaPredicted RBP6.32□□□□□ -1.4
RTTN-218ENST00000640408 ZKSCAN3Q9BRR0 538 aa6.32□□□□□ -1.4
RTTN-218ENST00000640408 CYP2D7A0A087X1C5 515 aa6.31□□□□□ -1.4
RTTN-218ENST00000640408 WTIPA6NIX2 430 aaPredicted RBP6.31□□□□□ -1.4
RTTN-218ENST00000640408 ATP8B1O43520 1251 aa6.31□□□□□ -1.4
RTTN-218ENST00000640408 PFKFB2O60825 505 aa6.31□□□□□ -1.4
RTTN-218ENST00000640408 MTMR2Q13614 643 aa6.31□□□□□ -1.4
RTTN-218ENST00000640408 MMS22LQ6ZRQ5 1243 aa6.31□□□□□ -1.4
RTTN-218ENST00000640408 METTL16Q86W50 562 aaKnown RBP6.31□□□□□ -1.4
RTTN-218ENST00000640408 REXO1Q8N1G1 1221 aaKnown RBP6.31□□□□□ -1.4
RTTN-218ENST00000640408 SLC44A5Q8NCS7 719 aa6.31□□□□□ -1.4
RTTN-218ENST00000640408 SHCBP1Q8NEM2 672 aa6.31□□□□□ -1.4
RTTN-218ENST00000640408 SOCS4Q8WXH5 440 aa6.31□□□□□ -1.4
RTTN-218ENST00000640408 CDK5RAP3Q96JB5 506 aa6.31□□□□□ -1.4
RTTN-218ENST00000640408 CFAP57Q96MR6 1250 aa6.31□□□□□ -1.4
RTTN-218ENST00000640408 RPAP3Q9H6T3 665 aaPredicted RBP6.31□□□□□ -1.4
RTTN-218ENST00000640408 GPHNQ9NQX3 736 aaPredicted RBP6.31□□□□□ -1.4
RTTN-218ENST00000640408 GCFC2P16383 781 aaKnown RBP6.31□□□□□ -1.4
RTTN-218ENST00000640408 CCT2P78371 535 aaKnown RBP6.31□□□□□ -1.4
RTTN-218ENST00000640408 ATP11AP98196 1134 aa6.31□□□□□ -1.4
RTTN-218ENST00000640408 AP3B2Q13367 1082 aa6.31□□□□□ -1.4
RTTN-218ENST00000640408 CCDC40Q4G0X9 1142 aa6.31□□□□□ -1.4
RTTN-218ENST00000640408 BRAPQ7Z569 592 aa6.31□□□□□ -1.4
RTTN-218ENST00000640408 FBXL16Q8N461 479 aa6.31□□□□□ -1.4
RTTN-218ENST00000640408 KCNB2Q92953 911 aa6.31□□□□□ -1.4
RTTN-218ENST00000640408 NUDT12Q9BQG2 462 aa6.31□□□□□ -1.4
RTTN-218ENST00000640408 NAA15Q9BXJ9 866 aaKnown RBP6.31□□□□□ -1.4
RTTN-218ENST00000640408 PFASO15067 1338 aa6.31□□□□□ -1.4
RTTN-218ENST00000640408 MAGEA9P43362 315 aa6.31□□□□□ -1.4
RTTN-218ENST00000640408 HIRAP54198 1017 aaPredicted RBP6.31□□□□□ -1.4
RTTN-218ENST00000640408 APOBRQ0VD83 1088 aa6.31□□□□□ -1.4
RTTN-218ENST00000640408 TSNAXIP1Q2TAA8 658 aa6.31□□□□□ -1.4
RTTN-218ENST00000640408 CCDC186Q7Z3E2 898 aa6.31□□□□□ -1.4
RTTN-218ENST00000640408 CCDC82Q8N4S0 544 aa6.31□□□□□ -1.4
RTTN-218ENST00000640408 DDX27Q96GQ7 796 aaKnown RBP6.31□□□□□ -1.4
RTTN-218ENST00000640408 LRRC27Q9C0I9 530 aa6.31□□□□□ -1.4
RTTN-218ENST00000640408 NBPF3Q9H094 633 aa6.31□□□□□ -1.4
RTTN-218ENST00000640408 SH3GLB2Q9NR46 395 aa6.31□□□□□ -1.4
RTTN-218ENST00000640408 TLL2Q9Y6L7 1015 aa6.31□□□□□ -1.4
RTTN-218ENST00000640408 A0A087WUV0 522 aaPredicted RBP6.31□□□□□ -1.4
RTTN-218ENST00000640408 ZBTB5O15062 677 aa6.31□□□□□ -1.4
RTTN-218ENST00000640408 USP2O75604 605 aaPredicted RBP6.31□□□□□ -1.4
RTTN-218ENST00000640408 FGRP09769 529 aa6.31□□□□□ -1.4
RTTN-218ENST00000640408 SCG2P13521 617 aa6.31□□□□□ -1.4
RTTN-218ENST00000640408 AK2P54819 239 aa6.31□□□□□ -1.4
RTTN-218ENST00000640408 MAP3K10Q02779 954 aa6.31□□□□□ -1.4
RTTN-218ENST00000640408 TUBB2AQ13885 445 aa6.31□□□□□ -1.4
RTTN-218ENST00000640408 STK38Q15208 465 aa6.31□□□□□ -1.4
RTTN-218ENST00000640408 GRIK5Q16478 980 aa6.31□□□□□ -1.4
RTTN-218ENST00000640408 PRAMEF18Q5VWM3 479 aa6.31□□□□□ -1.4
RTTN-218ENST00000640408 ENAHQ8N8S7 591 aaPredicted RBP6.31□□□□□ -1.4
RTTN-218ENST00000640408 FAM200AQ8TCP9 573 aa6.31□□□□□ -1.4
RTTN-218ENST00000640408 TUBB2BQ9BVA1 445 aa6.31□□□□□ -1.4
RTTN-218ENST00000640408 SCAND2PQ9GZW5 306 aaPredicted RBP6.31□□□□□ -1.4
RTTN-218ENST00000640408 PPP1R9AQ9ULJ8 1098 aa6.31□□□□□ -1.4
RTTN-218ENST00000640408 KCNH4Q9UQ05 1017 aa6.31□□□□□ -1.4
RTTN-218ENST00000640408 V9GY48 417 aaPredicted RBP6.31□□□□□ -1.4
RTTN-218ENST00000640408 ZEB2O60315 1214 aa6.31□□□□□ -1.4
RTTN-218ENST00000640408 IFFO1Q0D2I5 559 aa6.31□□□□□ -1.4
RTTN-218ENST00000640408 SH3D19Q5HYK7 790 aa6.31□□□□□ -1.4
RTTN-218ENST00000640408 CEP85LQ5SZL2 805 aa6.31□□□□□ -1.4
RTTN-218ENST00000640408 ARFGAP2Q8N6H7 521 aa6.31□□□□□ -1.4
RTTN-218ENST00000640408 PIK3R5Q8WYR1 880 aa6.31□□□□□ -1.4
RTTN-218ENST00000640408 NOL12Q9UGY1 213 aaKnown RBP eCLIP6.31□□□□□ -1.4
RTTN-218ENST00000640408 NRXN2Q9P2S2 1712 aa6.31□□□□□ -1.4
RTTN-218ENST00000640408 PRPF3O43395 683 aaKnown RBP6.3□□□□□ -1.4
RTTN-218ENST00000640408 MYCNP04198 464 aaPredicted RBP6.3□□□□□ -1.4
RTTN-218ENST00000640408 C1QTNF8P60827 252 aa6.3□□□□□ -1.4
RTTN-218ENST00000640408 GNG11P61952 73 aa6.3□□□□□ -1.4
RTTN-218ENST00000640408 ORC2Q13416 577 aaPredicted RBP6.3□□□□□ -1.4
RTTN-218ENST00000640408 NONOQ15233 471 aaKnown RBP eCLIP6.3□□□□□ -1.4
RTTN-218ENST00000640408 RILPL1Q5EBL4 403 aa6.3□□□□□ -1.4
RTTN-218ENST00000640408 TBC1D10CQ8IV04 446 aa6.3□□□□□ -1.4
RTTN-218ENST00000640408 GIMAP8Q8ND71 665 aaPredicted RBP6.3□□□□□ -1.4
RTTN-218ENST00000640408 ATRIPQ8WXE1 791 aa6.3□□□□□ -1.4
RTTN-218ENST00000640408 IRAK4Q9NWZ3 460 aa6.3□□□□□ -1.4
RTTN-218ENST00000640408 PTPDC1A2A3K4 754 aa6.3□□□□□ -1.4
RTTN-218ENST00000640408 FAM196BA6NMK8 535 aa6.3□□□□□ -1.4
RTTN-218ENST00000640408 EHBP1Q8NDI1 1231 aa6.3□□□□□ -1.4
RTTN-218ENST00000640408 ZKSCAN4Q969J2 545 aaPredicted RBP6.3□□□□□ -1.4
RTTN-218ENST00000640408 PSTPIP2Q9H939 334 aa6.3□□□□□ -1.4
RTTN-218ENST00000640408 RNF146Q9NTX7 359 aa6.3□□□□□ -1.4
RTTN-218ENST00000640408 DNAI1Q9UI46 699 aa6.3□□□□□ -1.4
RTTN-218ENST00000640408 FKTNO75072 461 aa6.3□□□□□ -1.4
RTTN-218ENST00000640408 PCK1P35558 622 aa6.3□□□□□ -1.4
RTTN-218ENST00000640408 RGS2P41220 211 aa6.3□□□□□ -1.4
RTTN-218ENST00000640408 TRAPPC10P48553 1259 aa6.3□□□□□ -1.4
RTTN-218ENST00000640408 SNCBQ16143 134 aa6.3□□□□□ -1.4
RTTN-218ENST00000640408 FAM83BQ5T0W9 1011 aa6.3□□□□□ -1.4
RTTN-218ENST00000640408 PPP4R3AQ6IN85 833 aa6.3□□□□□ -1.4
RTTN-218ENST00000640408 TMTC3Q6ZXV5 915 aa6.3□□□□□ -1.4
RTTN-218ENST00000640408 TMC6Q7Z403 805 aa6.3□□□□□ -1.4
RTTN-218ENST00000640408 SPICE1Q8N0Z3 855 aa6.3□□□□□ -1.4
RTTN-218ENST00000640408 NSUN6Q8TEA1 469 aaKnown RBP6.3□□□□□ -1.4
RTTN-218ENST00000640408 TAF4BQ92750 862 aa6.3□□□□□ -1.4
RTTN-218ENST00000640408 IFT74Q96LB3 600 aa6.3□□□□□ -1.4
RTTN-218ENST00000640408 LRRC2Q9BYS8 371 aa6.3□□□□□ -1.4
RTTN-218ENST00000640408 STK36Q9NRP7 1315 aa6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms