RNA–Protein interactions for RNA: ENST00000640135.1

SCN1B-208, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

TSL 5 BASIC

Gene SCN1B, Length 4,846 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-208ENST00000640135 RASA3Q14644 834 aa12.11□□□□□ -0.47
SCN1B-208ENST00000640135 RCSD1Q6JBY9 416 aa12.11□□□□□ -0.47
SCN1B-208ENST00000640135 RBM46Q8TBY0 533 aaKnown RBP12.11□□□□□ -0.47
SCN1B-208ENST00000640135 SARNPP82979 210 aaKnown RBP12.1□□□□□ -0.47
SCN1B-208ENST00000640135 PTK2Q05397 1052 aa12.1□□□□□ -0.47
SCN1B-208ENST00000640135 PSMD2Q13200 908 aa12.1□□□□□ -0.47
SCN1B-208ENST00000640135 PNOCQ13519 176 aa12.1□□□□□ -0.47
SCN1B-208ENST00000640135 PDXDC2PQ6P474 469 aa12.1□□□□□ -0.47
SCN1B-208ENST00000640135 PEX26Q7Z412 305 aa12.1□□□□□ -0.47
SCN1B-208ENST00000640135 SH3RF3Q8TEJ3 882 aaPredicted RBP12.1□□□□□ -0.47
SCN1B-208ENST00000640135 LSM14BQ9BX40 385 aaKnown RBP12.1□□□□□ -0.47
SCN1B-208ENST00000640135 PCDHA7Q9UN72 937 aa12.1□□□□□ -0.47
SCN1B-208ENST00000640135 POLR3GO15318 223 aaPredicted RBP12.1□□□□□ -0.47
SCN1B-208ENST00000640135 PRDX5P30044 214 aa12.1□□□□□ -0.47
SCN1B-208ENST00000640135 RNF187Q5TA31 235 aaPredicted RBP12.1□□□□□ -0.47
SCN1B-208ENST00000640135 NT5C1BQ96P26 610 aa12.1□□□□□ -0.47
SCN1B-208ENST00000640135 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.1□□□□□ -0.47
SCN1B-208ENST00000640135 RRAGDQ9NQL2 400 aaPredicted RBP12.1□□□□□ -0.47
SCN1B-208ENST00000640135 ZBTB5O15062 677 aa12.1□□□□□ -0.47
SCN1B-208ENST00000640135 MFAP3P55082 362 aa12.1□□□□□ -0.47
SCN1B-208ENST00000640135 STYK1Q6J9G0 422 aa12.1□□□□□ -0.47
SCN1B-208ENST00000640135 CCDC25Q86WR0 208 aa12.1□□□□□ -0.47
SCN1B-208ENST00000640135 RASEFQ8IZ41 740 aa12.1□□□□□ -0.47
SCN1B-208ENST00000640135 NSUN6Q8TEA1 469 aaKnown RBP12.1□□□□□ -0.47
SCN1B-208ENST00000640135 TBC1D31Q96DN5 1066 aa12.1□□□□□ -0.47
SCN1B-208ENST00000640135 FAM207AQ9NSI2 230 aaPredicted RBP12.1□□□□□ -0.47
SCN1B-208ENST00000640135 TBC1D22BQ9NU19 505 aa12.1□□□□□ -0.47
SCN1B-208ENST00000640135 ZNF233A6NK53 670 aa12.09□□□□□ -0.47
SCN1B-208ENST00000640135 PSMC2P35998 433 aaKnown RBP12.09□□□□□ -0.47
SCN1B-208ENST00000640135 MMP14P50281 582 aa12.09□□□□□ -0.47
SCN1B-208ENST00000640135 BIRC2Q13490 618 aa12.09□□□□□ -0.47
SCN1B-208ENST00000640135 SRGAP1Q7Z6B7 1085 aa12.09□□□□□ -0.47
SCN1B-208ENST00000640135 PRPF38AQ8NAV1 312 aaKnown RBP12.09□□□□□ -0.47
SCN1B-208ENST00000640135 PROCA1Q8NCQ7 364 aaPredicted RBP12.09□□□□□ -0.47
SCN1B-208ENST00000640135 GSDMBQ8TAX9 411 aa12.09□□□□□ -0.47
SCN1B-208ENST00000640135 GTF3C2Q8WUA4 911 aaPredicted RBP12.09□□□□□ -0.47
SCN1B-208ENST00000640135 TRIM11Q96F44 468 aa12.09□□□□□ -0.47
SCN1B-208ENST00000640135 ANO3Q9BYT9 981 aa12.09□□□□□ -0.47
SCN1B-208ENST00000640135 ATP8B3O60423 1300 aa12.09□□□□□ -0.47
SCN1B-208ENST00000640135 E9PCH4 1651 aa12.09□□□□□ -0.47
SCN1B-208ENST00000640135 GPSM2P81274 684 aa12.09□□□□□ -0.47
SCN1B-208ENST00000640135 NEDD9Q14511 834 aa12.09□□□□□ -0.47
SCN1B-208ENST00000640135 SLFN12LQ6IEE8 588 aa12.09□□□□□ -0.47
SCN1B-208ENST00000640135 C8orf74Q6P047 294 aa12.09□□□□□ -0.47
SCN1B-208ENST00000640135 SYT10Q6XYQ8 523 aa12.09□□□□□ -0.47
SCN1B-208ENST00000640135 NEK9Q8TD19 979 aa12.09□□□□□ -0.47
SCN1B-208ENST00000640135 IFT81Q8WYA0 676 aa12.09□□□□□ -0.47
SCN1B-208ENST00000640135 PAIP2Q9BPZ3 127 aaKnown RBP12.09□□□□□ -0.47
SCN1B-208ENST00000640135 SPATA31D1Q6ZQQ2 1576 aa12.09□□□□□ -0.47
SCN1B-208ENST00000640135 TYW5A2RUC4 315 aaKnown RBP12.09□□□□□ -0.47
SCN1B-208ENST00000640135 DLATP10515 647 aaKnown RBP12.09□□□□□ -0.47
SCN1B-208ENST00000640135 ANKS4BQ8N8V4 417 aa12.09□□□□□ -0.47
SCN1B-208ENST00000640135 RPGRIP1Q96KN7 1286 aa12.09□□□□□ -0.47
SCN1B-208ENST00000640135 SMC6Q96SB8 1091 aa12.09□□□□□ -0.47
SCN1B-208ENST00000640135 ANKFY1Q9P2R3 1169 aa12.09□□□□□ -0.47
SCN1B-208ENST00000640135 AMFRQ9UKV5 643 aa12.09□□□□□ -0.47
SCN1B-208ENST00000640135 GIPC1O14908 333 aa12.09□□□□□ -0.47
SCN1B-208ENST00000640135 RNF8O76064 485 aa12.09□□□□□ -0.47
SCN1B-208ENST00000640135 RPS12P25398 132 aaKnown RBP12.09□□□□□ -0.47
SCN1B-208ENST00000640135 CFAP221Q4G0U5 840 aa12.09□□□□□ -0.47
SCN1B-208ENST00000640135 MARCH10Q8NA82 808 aaPredicted RBP12.09□□□□□ -0.47
SCN1B-208ENST00000640135 PI4K2BQ8TCG2 481 aa12.09□□□□□ -0.47
SCN1B-208ENST00000640135 IFIH1Q9BYX4 1025 aaKnown RBP12.09□□□□□ -0.47
SCN1B-208ENST00000640135 LMBRD1Q9NUN5 540 aa12.09□□□□□ -0.47
SCN1B-208ENST00000640135 NKIRAS1Q9NYS0 192 aa12.09□□□□□ -0.47
SCN1B-208ENST00000640135 USTQ9Y2C2 406 aa12.09□□□□□ -0.47
SCN1B-208ENST00000640135 REREQ9P2R6 1566 aa12.09□□□□□ -0.47
SCN1B-208ENST00000640135 STAM2O75886 525 aa12.08□□□□□ -0.47
SCN1B-208ENST00000640135 ZBTB16Q05516 673 aa12.08□□□□□ -0.47
SCN1B-208ENST00000640135 RNASELQ05823 741 aaKnown RBP12.08□□□□□ -0.47
SCN1B-208ENST00000640135 ADCK5Q3MIX3 580 aa12.08□□□□□ -0.47
SCN1B-208ENST00000640135 KIAA1841Q6NSI8 718 aa12.08□□□□□ -0.47
SCN1B-208ENST00000640135 TRIM50Q86XT4 487 aa12.08□□□□□ -0.47
SCN1B-208ENST00000640135 ZNF34Q8IZ26 560 aa12.08□□□□□ -0.47
SCN1B-208ENST00000640135 AFAP1L2Q8N4X5 818 aa12.08□□□□□ -0.47
SCN1B-208ENST00000640135 CCT6BQ92526 530 aa12.08□□□□□ -0.47
SCN1B-208ENST00000640135 CCDC127Q96BQ5 260 aa12.08□□□□□ -0.47
SCN1B-208ENST00000640135 NLRC4Q9NPP4 1024 aa12.08□□□□□ -0.47
SCN1B-208ENST00000640135 PARP2Q9UGN5 583 aa12.08□□□□□ -0.47
SCN1B-208ENST00000640135 FKBP3Q00688 224 aaKnown RBP12.08□□□□□ -0.48
SCN1B-208ENST00000640135 EPHA10Q5JZY3 1008 aa12.08□□□□□ -0.48
SCN1B-208ENST00000640135 MAP7D3Q8IWC1 876 aa12.08□□□□□ -0.48
SCN1B-208ENST00000640135 IFT20Q8IY31 132 aa12.08□□□□□ -0.48
SCN1B-208ENST00000640135 MCPH1Q8NEM0 835 aa12.08□□□□□ -0.48
SCN1B-208ENST00000640135 DCP1AQ9NPI6 582 aaPredicted RBP12.08□□□□□ -0.48
SCN1B-208ENST00000640135 PFDN6O15212 129 aa12.08□□□□□ -0.48
SCN1B-208ENST00000640135 EEF1GP26641 437 aaKnown RBP12.08□□□□□ -0.48
SCN1B-208ENST00000640135 KRT76Q01546 638 aa12.08□□□□□ -0.48
SCN1B-208ENST00000640135 KIF23Q02241 960 aaPredicted RBP12.08□□□□□ -0.48
SCN1B-208ENST00000640135 EXOC3L4Q17RC7 722 aa12.08□□□□□ -0.48
SCN1B-208ENST00000640135 MFSD14CQ5VZR4 134 aa12.08□□□□□ -0.48
SCN1B-208ENST00000640135 PPM1KQ8N3J5 372 aa12.08□□□□□ -0.48
SCN1B-208ENST00000640135 TRIM7Q9C029 511 aa12.08□□□□□ -0.48
SCN1B-208ENST00000640135 PARVGQ9HBI0 331 aa12.08□□□□□ -0.48
SCN1B-208ENST00000640135 ITIH3Q06033 890 aa12.08□□□□□ -0.48
SCN1B-208ENST00000640135 RABL6Q3YEC7 729 aaPredicted RBP12.08□□□□□ -0.48
SCN1B-208ENST00000640135 PRR5LQ6MZQ0 368 aa12.08□□□□□ -0.48
SCN1B-208ENST00000640135 TMTC3Q6ZXV5 915 aa12.08□□□□□ -0.48
SCN1B-208ENST00000640135 SMAP1Q8IYB5 467 aaPredicted RBP12.08□□□□□ -0.48
SCN1B-208ENST00000640135 BBS5Q8N3I7 341 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms