RNA–Protein interactions for RNA: ENST00000639673.1

TRIM43B-202, Transcript of tripartite motif containing 43B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM43B, Length 1,668 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM43B-202ENST00000639673 TDHQ8IZJ6 230 aa11.52□□□□□ -0.56
TRIM43B-202ENST00000639673 CTCFLQ8NI51 663 aaPredicted RBP11.52□□□□□ -0.56
TRIM43B-202ENST00000639673 VTI1AQ96AJ9 217 aa11.52□□□□□ -0.56
TRIM43B-202ENST00000639673 TCEANC2Q96MN5 208 aa11.52□□□□□ -0.56
TRIM43B-202ENST00000639673 RMDN3Q96TC7 470 aa11.52□□□□□ -0.56
TRIM43B-202ENST00000639673 LBHD1Q9BQE6 289 aaPredicted RBP11.52□□□□□ -0.56
TRIM43B-202ENST00000639673 ELP1O95163 1332 aa11.52□□□□□ -0.57
TRIM43B-202ENST00000639673 BAZ2BQ9UIF8 2168 aaKnown RBP11.52□□□□□ -0.57
TRIM43B-202ENST00000639673 A0A0U1RQG5 324 aaPredicted RBP11.52□□□□□ -0.57
TRIM43B-202ENST00000639673 RBM47A0AV96 593 aaKnown RBP11.52□□□□□ -0.57
TRIM43B-202ENST00000639673 ARIH2O95376 493 aa11.52□□□□□ -0.57
TRIM43B-202ENST00000639673 PLEKHA8P1O95397 391 aa11.52□□□□□ -0.57
TRIM43B-202ENST00000639673 ITGB8P26012 769 aa11.52□□□□□ -0.57
TRIM43B-202ENST00000639673 HOXA13P31271 388 aaPredicted RBP11.52□□□□□ -0.57
TRIM43B-202ENST00000639673 HSD17B4P51659 736 aa11.52□□□□□ -0.57
TRIM43B-202ENST00000639673 PPP2R5BQ15173 497 aa11.52□□□□□ -0.57
TRIM43B-202ENST00000639673 ADCK5Q3MIX3 580 aa11.52□□□□□ -0.57
TRIM43B-202ENST00000639673 ARHGEF16Q5VV41 709 aa11.52□□□□□ -0.57
TRIM43B-202ENST00000639673 ANKRD33Q7Z3H0 272 aa11.52□□□□□ -0.57
TRIM43B-202ENST00000639673 CMTR1Q8N1G2 835 aaKnown RBP11.52□□□□□ -0.57
TRIM43B-202ENST00000639673 NSUN6Q8TEA1 469 aaKnown RBP11.52□□□□□ -0.57
TRIM43B-202ENST00000639673 COPS5Q92905 334 aa11.52□□□□□ -0.57
TRIM43B-202ENST00000639673 BADQ92934 168 aa11.52□□□□□ -0.57
TRIM43B-202ENST00000639673 NEK1Q96PY6 1258 aa11.52□□□□□ -0.57
TRIM43B-202ENST00000639673 MAP3K14Q99558 947 aa11.52□□□□□ -0.57
TRIM43B-202ENST00000639673 Q9Y3F1 56 aa11.52□□□□□ -0.57
TRIM43B-202ENST00000639673 PNMA6FA0A0J9YX94 578 aa11.51□□□□□ -0.57
TRIM43B-202ENST00000639673 B4DLN1 442 aa11.51□□□□□ -0.57
TRIM43B-202ENST00000639673 KIF5BP33176 963 aa11.51□□□□□ -0.57
TRIM43B-202ENST00000639673 LIFRP42702 1097 aa11.51□□□□□ -0.57
TRIM43B-202ENST00000639673 MRPL12P52815 198 aaKnown RBP11.51□□□□□ -0.57
TRIM43B-202ENST00000639673 GHRHRQ02643 423 aa11.51□□□□□ -0.57
TRIM43B-202ENST00000639673 FAAP100Q0VG06 881 aa11.51□□□□□ -0.57
TRIM43B-202ENST00000639673 OR6J1Q8NGC5 347 aa11.51□□□□□ -0.57
TRIM43B-202ENST00000639673 SCFD2Q8WU76 684 aa11.51□□□□□ -0.57
TRIM43B-202ENST00000639673 LRCH3Q96II8 777 aa11.51□□□□□ -0.57
TRIM43B-202ENST00000639673 MAF1Q9H063 256 aa11.51□□□□□ -0.57
TRIM43B-202ENST00000639673 PXMP2Q9NR77 195 aa11.51□□□□□ -0.57
TRIM43B-202ENST00000639673 ARVCFO00192 962 aa11.5□□□□□ -0.57
TRIM43B-202ENST00000639673 TXNP10599 105 aaKnown RBP11.5□□□□□ -0.57
TRIM43B-202ENST00000639673 CDK7P50613 346 aa11.5□□□□□ -0.57
TRIM43B-202ENST00000639673 PSMC6P62333 389 aa11.5□□□□□ -0.57
TRIM43B-202ENST00000639673 SEPT14Q6ZU15 432 aa11.5□□□□□ -0.57
TRIM43B-202ENST00000639673 MICU3Q86XE3 530 aa11.5□□□□□ -0.57
TRIM43B-202ENST00000639673 TMTC2Q8N394 836 aa11.5□□□□□ -0.57
TRIM43B-202ENST00000639673 SRBD1Q8N5C6 995 aaKnown RBP11.5□□□□□ -0.57
TRIM43B-202ENST00000639673 TOX2Q96NM4 488 aa11.5□□□□□ -0.57
TRIM43B-202ENST00000639673 SPZ1Q9BXG8 430 aa11.5□□□□□ -0.57
TRIM43B-202ENST00000639673 TMEM39AQ9NV64 488 aa11.5□□□□□ -0.57
TRIM43B-202ENST00000639673 SLC12A7Q9Y666 1083 aa11.5□□□□□ -0.57
TRIM43B-202ENST00000639673 DCDC2CA8MYV0 355 aa11.49□□□□□ -0.57
TRIM43B-202ENST00000639673 KIAA0355O15063 1070 aa11.49□□□□□ -0.57
TRIM43B-202ENST00000639673 ZEB2O60315 1214 aa11.49□□□□□ -0.57
TRIM43B-202ENST00000639673 NR3C2P08235 984 aa11.49□□□□□ -0.57
TRIM43B-202ENST00000639673 EXOSC10Q01780 885 aaKnown RBP11.49□□□□□ -0.57
TRIM43B-202ENST00000639673 TTLL4Q14679 1199 aa11.49□□□□□ -0.57
TRIM43B-202ENST00000639673 STXBP2Q15833 593 aa11.49□□□□□ -0.57
TRIM43B-202ENST00000639673 TSGA10IPQ3SY00 556 aa11.49□□□□□ -0.57
TRIM43B-202ENST00000639673 DHX32Q7L7V1 743 aaKnown RBP11.49□□□□□ -0.57
TRIM43B-202ENST00000639673 SGMS1Q86VZ5 419 aa11.49□□□□□ -0.57
TRIM43B-202ENST00000639673 FCHSD1Q86WN1 690 aa11.49□□□□□ -0.57
TRIM43B-202ENST00000639673 IFNLR1Q8IU57 520 aaPredicted RBP11.49□□□□□ -0.57
TRIM43B-202ENST00000639673 FAM126BQ8IXS8 530 aa11.49□□□□□ -0.57
TRIM43B-202ENST00000639673 IL31RAQ8NI17 732 aa11.49□□□□□ -0.57
TRIM43B-202ENST00000639673 RRP36Q96EU6 259 aaKnown RBP11.49□□□□□ -0.57
TRIM43B-202ENST00000639673 IWS1Q96ST2 819 aa11.49□□□□□ -0.57
TRIM43B-202ENST00000639673 GRIN2DO15399 1336 aa11.49□□□□□ -0.57
TRIM43B-202ENST00000639673 MROH7Q68CQ1 1323 aa11.49□□□□□ -0.57
TRIM43B-202ENST00000639673 hCG_1642624A0A1W2PR95 340 aa11.49□□□□□ -0.57
TRIM43B-202ENST00000639673 GCOM1H8Y6P7 765 aaPredicted RBP11.49□□□□□ -0.57
TRIM43B-202ENST00000639673 NKRFO15226 690 aaKnown RBP eCLIP11.49□□□□□ -0.57
TRIM43B-202ENST00000639673 CABYRO75952 493 aa11.49□□□□□ -0.57
TRIM43B-202ENST00000639673 MYL3P08590 195 aa11.49□□□□□ -0.57
TRIM43B-202ENST00000639673 POLR2MP0CAP2 368 aa11.49□□□□□ -0.57
TRIM43B-202ENST00000639673 CALM1P0DP23 149 aa11.49□□□□□ -0.57
TRIM43B-202ENST00000639673 CALM2P0DP24 149 aa11.49□□□□□ -0.57
TRIM43B-202ENST00000639673 CALM3P0DP25 149 aa11.49□□□□□ -0.57
TRIM43B-202ENST00000639673 CPA1P15085 419 aa11.49□□□□□ -0.57
TRIM43B-202ENST00000639673 RAG1P15918 1043 aa11.49□□□□□ -0.57
TRIM43B-202ENST00000639673 GNAQP50148 359 aa11.49□□□□□ -0.57
TRIM43B-202ENST00000639673 CPT1AP50416 773 aa11.49□□□□□ -0.57
TRIM43B-202ENST00000639673 ITGA7Q13683 1181 aa11.49□□□□□ -0.57
TRIM43B-202ENST00000639673 LY6KQ17RY6 165 aa11.49□□□□□ -0.57
TRIM43B-202ENST00000639673 CCDC62Q6P9F0 684 aa11.49□□□□□ -0.57
TRIM43B-202ENST00000639673 CCDC82Q8N4S0 544 aa11.49□□□□□ -0.57
TRIM43B-202ENST00000639673 FANCBQ8NB91 859 aa11.49□□□□□ -0.57
TRIM43B-202ENST00000639673 ZFP91Q96JP5 570 aaPredicted RBP11.49□□□□□ -0.57
TRIM43B-202ENST00000639673 LZTS2Q9BRK4 669 aa11.49□□□□□ -0.57
TRIM43B-202ENST00000639673 PDCD2LQ9BRP1 358 aa11.49□□□□□ -0.57
TRIM43B-202ENST00000639673 SEC63Q9UGP8 760 aaKnown RBP11.49□□□□□ -0.57
TRIM43B-202ENST00000639673 TBX21Q9UL17 535 aa11.49□□□□□ -0.57
TRIM43B-202ENST00000639673 EIF3JO75822 258 aaKnown RBP11.48□□□□□ -0.57
TRIM43B-202ENST00000639673 MYCLP12524 364 aaPredicted RBP11.48□□□□□ -0.57
TRIM43B-202ENST00000639673 HSPA4P34932 840 aa11.48□□□□□ -0.57
TRIM43B-202ENST00000639673 PURAQ00577 322 aaKnown RBP11.48□□□□□ -0.57
TRIM43B-202ENST00000639673 TRAF1Q13077 416 aa11.48□□□□□ -0.57
TRIM43B-202ENST00000639673 KRT32Q14532 448 aa11.48□□□□□ -0.57
TRIM43B-202ENST00000639673 PGM5Q15124 567 aa11.48□□□□□ -0.57
TRIM43B-202ENST00000639673 LRIT3Q3SXY7 679 aa11.48□□□□□ -0.57
TRIM43B-202ENST00000639673 C9orf50Q5SZB4 431 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms