RNA–Protein interactions for RNA: ENST00000639629.1

CCDC7-215, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CCDC7, Length 4,158 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-215ENST00000639629 PROP1O75360 226 aa0.71□□□□□ -2.3
CCDC7-215ENST00000639629 CKMP06732 381 aa0.71□□□□□ -2.3
CCDC7-215ENST00000639629 TGM1P22735 817 aa0.71□□□□□ -2.3
CCDC7-215ENST00000639629 NMIQ13287 307 aaPredicted RBP0.71□□□□□ -2.3
CCDC7-215ENST00000639629 TWIST1Q15672 202 aa0.71□□□□□ -2.3
CCDC7-215ENST00000639629 TBC1D10BQ4KMP7 808 aaPredicted RBP0.71□□□□□ -2.3
CCDC7-215ENST00000639629 WIPI1Q5MNZ9 446 aaPredicted RBP0.71□□□□□ -2.3
CCDC7-215ENST00000639629 HLA-DQA1Q5Y7H0 255 aa0.71□□□□□ -2.3
CCDC7-215ENST00000639629 KANK2Q63ZY3 851 aa0.71□□□□□ -2.3
CCDC7-215ENST00000639629 TMPRSS9Q7Z410 1059 aa0.71□□□□□ -2.3
CCDC7-215ENST00000639629 CCDC103Q8IW40 242 aa0.71□□□□□ -2.3
CCDC7-215ENST00000639629 FAM181AQ8N9Y4 354 aa0.71□□□□□ -2.3
CCDC7-215ENST00000639629 SH3RF2Q8TEC5 729 aa0.71□□□□□ -2.3
CCDC7-215ENST00000639629 CCDC97Q96F63 343 aaPredicted RBP0.71□□□□□ -2.3
CCDC7-215ENST00000639629 DUSP9Q99956 384 aaKnown RBP0.71□□□□□ -2.3
CCDC7-215ENST00000639629 MKNK1Q9BUB5 465 aa0.71□□□□□ -2.3
CCDC7-215ENST00000639629 USP26Q9BXU7 913 aa0.71□□□□□ -2.3
CCDC7-215ENST00000639629 MIR1-1HGQ9H1L0 117 aa0.71□□□□□ -2.3
CCDC7-215ENST00000639629 SRRDQ9UH36 339 aa0.71□□□□□ -2.3
CCDC7-215ENST00000639629 ANGEL1Q9UNK9 670 aaKnown RBP0.71□□□□□ -2.3
CCDC7-215ENST00000639629 COX11Q9Y6N1 276 aa0.71□□□□□ -2.3
CCDC7-215ENST00000639629 DNAH7Q8WXX0 4024 aa0.71□□□□□ -2.3
CCDC7-215ENST00000639629 PROB1E7EW31 1015 aa0.71□□□□□ -2.3
CCDC7-215ENST00000639629 ADCY3O60266 1144 aa0.71□□□□□ -2.3
CCDC7-215ENST00000639629 CLASP2O75122 1294 aaKnown RBP0.71□□□□□ -2.3
CCDC7-215ENST00000639629 RAD17O75943 681 aa0.71□□□□□ -2.3
CCDC7-215ENST00000639629 C4BPAP04003 597 aaKnown RBP0.71□□□□□ -2.3
CCDC7-215ENST00000639629 ZBTB48P10074 688 aaPredicted RBP0.71□□□□□ -2.3
CCDC7-215ENST00000639629 ZNF16P17020 682 aaPredicted RBP0.71□□□□□ -2.3
CCDC7-215ENST00000639629 ZNF165P49910 485 aa0.71□□□□□ -2.3
CCDC7-215ENST00000639629 EPHB3P54753 998 aa0.71□□□□□ -2.3
CCDC7-215ENST00000639629 TMEM62Q0P6H9 643 aa0.71□□□□□ -2.3
CCDC7-215ENST00000639629 IKZF1Q13422 519 aa0.71□□□□□ -2.3
CCDC7-215ENST00000639629 MBLAC2Q68D91 279 aa0.71□□□□□ -2.3
CCDC7-215ENST00000639629 ADAMTS17Q8TE56 1095 aa0.71□□□□□ -2.3
CCDC7-215ENST00000639629 TRPS1Q9UHF7 1281 aa0.71□□□□□ -2.3
CCDC7-215ENST00000639629 NARSO43776 548 aaKnown RBP0.71□□□□□ -2.3
CCDC7-215ENST00000639629 PCBP3P57721 371 aaKnown RBP0.71□□□□□ -2.3
CCDC7-215ENST00000639629 AKAP4Q5JQC9 854 aa0.71□□□□□ -2.3
CCDC7-215ENST00000639629 EEF1DP3Q658K8 133 aa0.71□□□□□ -2.3
CCDC7-215ENST00000639629 SLFN13Q68D06 897 aa0.71□□□□□ -2.3
CCDC7-215ENST00000639629 KRTAP5-7Q6L8G8 165 aa0.71□□□□□ -2.3
CCDC7-215ENST00000639629 NLRP10Q86W26 655 aa0.71□□□□□ -2.3
CCDC7-215ENST00000639629 PPIL4Q8WUA2 492 aaKnown RBP eCLIP0.71□□□□□ -2.3
CCDC7-215ENST00000639629 HOXB13Q92826 284 aaPredicted RBP0.71□□□□□ -2.3
CCDC7-215ENST00000639629 C11orf84Q9BUA3 381 aaPredicted RBP0.71□□□□□ -2.3
CCDC7-215ENST00000639629 BRMS1Q9HCU9 246 aa0.71□□□□□ -2.3
CCDC7-215ENST00000639629 COPRSQ9NQ92 184 aa0.71□□□□□ -2.3
CCDC7-215ENST00000639629 TLR6Q9Y2C9 796 aa0.71□□□□□ -2.3
CCDC7-215ENST00000639629 PCDHB14Q9Y5E9 798 aa0.71□□□□□ -2.3
CCDC7-215ENST00000639629 OR14I1A6ND48 311 aa0.7□□□□□ -2.3
CCDC7-215ENST00000639629 TMEM200CA6NKL6 621 aa0.7□□□□□ -2.3
CCDC7-215ENST00000639629 CUTAO60888 179 aa0.7□□□□□ -2.3
CCDC7-215ENST00000639629 HCLS1P14317 486 aaPredicted RBP0.7□□□□□ -2.3
CCDC7-215ENST00000639629 ZFP36P26651 326 aaKnown RBP0.7□□□□□ -2.3
CCDC7-215ENST00000639629 FOXF2Q12947 444 aa0.7□□□□□ -2.3
CCDC7-215ENST00000639629 SEPT6Q14141 434 aa0.7□□□□□ -2.3
CCDC7-215ENST00000639629 PLCL1Q15111 1095 aa0.7□□□□□ -2.3
CCDC7-215ENST00000639629 ZXDCQ2QGD7 858 aaPredicted RBP0.7□□□□□ -2.3
CCDC7-215ENST00000639629 CDCA8Q53HL2 280 aa0.7□□□□□ -2.3
CCDC7-215ENST00000639629 EAPPQ56P03 285 aaPredicted RBP0.7□□□□□ -2.3
CCDC7-215ENST00000639629 AXDND1Q5T1B0 1012 aaPredicted RBP0.7□□□□□ -2.3
CCDC7-215ENST00000639629 TMC3Q7Z5M5 1100 aa0.7□□□□□ -2.3
CCDC7-215ENST00000639629 TP53INP2Q8IXH6 220 aa0.7□□□□□ -2.3
CCDC7-215ENST00000639629 FBXO27Q8NI29 283 aa0.7□□□□□ -2.3
CCDC7-215ENST00000639629 FOXRED1Q96CU9 486 aaPredicted RBP0.7□□□□□ -2.3
CCDC7-215ENST00000639629 GPR27Q9NS67 375 aa0.7□□□□□ -2.3
CCDC7-215ENST00000639629 ASH2LQ9UBL3 628 aa0.7□□□□□ -2.3
CCDC7-215ENST00000639629 SF3B6Q9Y3B4 125 aaKnown RBP0.7□□□□□ -2.3
CCDC7-215ENST00000639629 CTDP1Q9Y5B0 961 aaPredicted RBP0.7□□□□□ -2.3
CCDC7-215ENST00000639629 CORINQ9Y5Q5 1042 aa0.7□□□□□ -2.3
CCDC7-215ENST00000639629 TCRBV5S4A2TA0A5A2 114 aa0.7□□□□□ -2.3
CCDC7-215ENST00000639629 IL18BPO95998 194 aa0.7□□□□□ -2.3
CCDC7-215ENST00000639629 RPL10P27635 214 aaKnown RBP0.7□□□□□ -2.3
CCDC7-215ENST00000639629 SCAPQ12770 1279 aa0.7□□□□□ -2.3
CCDC7-215ENST00000639629 C8orf34Q49A92 452 aa0.7□□□□□ -2.3
CCDC7-215ENST00000639629 Q6ZUG5 572 aa0.7□□□□□ -2.3
CCDC7-215ENST00000639629 CDH24Q86UP0 819 aa0.7□□□□□ -2.3
CCDC7-215ENST00000639629 KSR1Q8IVT5 923 aa0.7□□□□□ -2.3
CCDC7-215ENST00000639629 LILRA3Q8N6C8 439 aaPredicted RBP0.7□□□□□ -2.3
CCDC7-215ENST00000639629 KYQ8NBH2 561 aa0.7□□□□□ -2.3
CCDC7-215ENST00000639629 ASAP3Q8TDY4 903 aa0.7□□□□□ -2.3
CCDC7-215ENST00000639629 DHRS1Q96LJ7 313 aa0.7□□□□□ -2.3
CCDC7-215ENST00000639629 NELFAQ9H3P2 528 aa0.7□□□□□ -2.3
CCDC7-215ENST00000639629 SMOC1Q9H4F8 434 aa0.7□□□□□ -2.3
CCDC7-215ENST00000639629 DUSP13Q9UII6 198 aa0.7□□□□□ -2.3
CCDC7-215ENST00000639629 SCOCQ9UIL1 159 aa0.7□□□□□ -2.3
CCDC7-215ENST00000639629 VWA7Q9Y334 891 aa0.7□□□□□ -2.3
CCDC7-215ENST00000639629 C7orf72A4D263 438 aa0.7□□□□□ -2.3
CCDC7-215ENST00000639629 ANKRD34BA5PLL1 514 aa0.7□□□□□ -2.3
CCDC7-215ENST00000639629 GNAT3A8MTJ3 354 aa0.7□□□□□ -2.3
CCDC7-215ENST00000639629 AKAP8O43823 692 aaKnown RBP0.7□□□□□ -2.3
CCDC7-215ENST00000639629 FNTBP49356 437 aa0.7□□□□□ -2.3
CCDC7-215ENST00000639629 CSRP2Q16527 193 aa0.7□□□□□ -2.3
CCDC7-215ENST00000639629 BTNL9Q6UXG8 535 aa0.7□□□□□ -2.3
CCDC7-215ENST00000639629 LRRC55Q6ZSA7 311 aa0.7□□□□□ -2.3
CCDC7-215ENST00000639629 ZNF654Q8IZM8 581 aa0.7□□□□□ -2.3
CCDC7-215ENST00000639629 Q8N9P0 234 aaPredicted RBP0.7□□□□□ -2.3
CCDC7-215ENST00000639629 Q8TCH9 128 aa0.7□□□□□ -2.3
CCDC7-215ENST00000639629 MICAL1Q8TDZ2 1067 aa0.7□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms