RNA–Protein interactions for RNA: ENST00000639483.1

KCNMA1-260, Transcript of potassium calcium-activated channel subfamily M alpha 1, humanhuman

TSL 5

Gene KCNMA1, Length 4,021 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNMA1-260ENST00000639483 TOGARAM2Q6ZUX3 1019 aa18■□□□□ 0.47
KCNMA1-260ENST00000639483 DDX12PQ92771 950 aa18■□□□□ 0.47
KCNMA1-260ENST00000639483 BICD1Q96G01 975 aa18■□□□□ 0.47
KCNMA1-260ENST00000639483 CD44P16070 742 aaKnown RBP17.99■□□□□ 0.47
KCNMA1-260ENST00000639483 TERF1P54274 439 aa17.99■□□□□ 0.47
KCNMA1-260ENST00000639483 RNASE9P60153 205 aaKnown RBP17.99■□□□□ 0.47
KCNMA1-260ENST00000639483 STXBP4Q6ZWJ1 553 aa17.99■□□□□ 0.47
KCNMA1-260ENST00000639483 ZNF341Q9BYN7 854 aa17.99■□□□□ 0.47
KCNMA1-260ENST00000639483 ERICH4A6NGS2 130 aa17.99■□□□□ 0.47
KCNMA1-260ENST00000639483 DNM2P50570 870 aa17.99■□□□□ 0.47
KCNMA1-260ENST00000639483 RHBDL3P58872 404 aa17.99■□□□□ 0.47
KCNMA1-260ENST00000639483 DPYDQ12882 1025 aa17.99■□□□□ 0.47
KCNMA1-260ENST00000639483 PTPROQ16827 1216 aa17.99■□□□□ 0.47
KCNMA1-260ENST00000639483 TCP11X2Q5H9J9 407 aa17.99■□□□□ 0.47
KCNMA1-260ENST00000639483 HINFPQ9BQA5 517 aa17.99■□□□□ 0.47
KCNMA1-260ENST00000639483 NDUFB10O96000 172 aa17.99■□□□□ 0.47
KCNMA1-260ENST00000639483 SLC15A2Q16348 729 aa17.99■□□□□ 0.47
KCNMA1-260ENST00000639483 VPS36Q86VN1 386 aa17.99■□□□□ 0.47
KCNMA1-260ENST00000639483 PIGOQ8TEQ8 1089 aa17.98■□□□□ 0.47
KCNMA1-260ENST00000639483 ALS2CR12Q96Q35 445 aa17.98■□□□□ 0.47
KCNMA1-260ENST00000639483 PSDA5PKW4 1024 aaPredicted RBP17.98■□□□□ 0.47
KCNMA1-260ENST00000639483 TRIM14Q14142 442 aa17.98■□□□□ 0.47
KCNMA1-260ENST00000639483 NCAPHQ15003 741 aa17.98■□□□□ 0.47
KCNMA1-260ENST00000639483 LRCH2Q5VUJ6 765 aa17.98■□□□□ 0.47
KCNMA1-260ENST00000639483 HHIPL2Q6UWX4 724 aa17.98■□□□□ 0.47
KCNMA1-260ENST00000639483 PAFAH1B1P43034 410 aa17.98■□□□□ 0.47
KCNMA1-260ENST00000639483 PRPF4BQ13523 1007 aaKnown RBP17.98■□□□□ 0.47
KCNMA1-260ENST00000639483 ZMYND12Q9H0C1 365 aa17.98■□□□□ 0.47
KCNMA1-260ENST00000639483 SPTLC3Q9NUV7 552 aa17.98■□□□□ 0.47
KCNMA1-260ENST00000639483 CCDC169A6NNP5 214 aa17.97■□□□□ 0.47
KCNMA1-260ENST00000639483 ARHGAP4P98171 946 aa17.97■□□□□ 0.47
KCNMA1-260ENST00000639483 CIAPIN1Q6FI81 312 aa17.97■□□□□ 0.47
KCNMA1-260ENST00000639483 JAKMIP2Q96AA8 810 aa17.97■□□□□ 0.47
KCNMA1-260ENST00000639483 SLIT2O94813 1529 aa17.97■□□□□ 0.47
KCNMA1-260ENST00000639483 POTEFA5A3E0 1075 aa17.97■□□□□ 0.47
KCNMA1-260ENST00000639483 POTEIP0CG38 1075 aa17.97■□□□□ 0.47
KCNMA1-260ENST00000639483 CCNE1P24864 410 aa17.97■□□□□ 0.47
KCNMA1-260ENST00000639483 PPP1R2P41236 205 aa17.97■□□□□ 0.47
KCNMA1-260ENST00000639483 CTTNQ14247 550 aaKnown RBP17.97■□□□□ 0.47
KCNMA1-260ENST00000639483 POTEGQ6S5H5 508 aa17.97■□□□□ 0.47
KCNMA1-260ENST00000639483 POTEEQ6S8J3 1075 aa17.97■□□□□ 0.47
KCNMA1-260ENST00000639483 RTKN2Q8IZC4 609 aa17.97■□□□□ 0.47
KCNMA1-260ENST00000639483 IRX2Q9BZI1 471 aaPredicted RBP17.97■□□□□ 0.47
KCNMA1-260ENST00000639483 BHMT2Q9H2M3 363 aa17.97■□□□□ 0.47
KCNMA1-260ENST00000639483 CENPHQ9H3R5 247 aa17.97■□□□□ 0.47
KCNMA1-260ENST00000639483 SUGT1Q9Y2Z0 365 aa17.97■□□□□ 0.47
KCNMA1-260ENST00000639483 KDM3AQ9Y4C1 1321 aa17.97■□□□□ 0.47
KCNMA1-260ENST00000639483 ENC1O14682 589 aa17.97■□□□□ 0.47
KCNMA1-260ENST00000639483 PLA2G4BP0C869 781 aa17.97■□□□□ 0.47
KCNMA1-260ENST00000639483 CYP2J2P51589 502 aa17.97■□□□□ 0.47
KCNMA1-260ENST00000639483 PRAMEF18Q5VWM3 479 aa17.97■□□□□ 0.47
KCNMA1-260ENST00000639483 TMEM39BQ9GZU3 492 aa17.97■□□□□ 0.47
KCNMA1-260ENST00000639483 HOXA10P31260 410 aaPredicted RBP17.96■□□□□ 0.47
KCNMA1-260ENST00000639483 CYP27A1Q02318 531 aa17.96■□□□□ 0.47
KCNMA1-260ENST00000639483 STK4Q13043 487 aa17.96■□□□□ 0.47
KCNMA1-260ENST00000639483 ADAM9Q13443 819 aa17.96■□□□□ 0.47
KCNMA1-260ENST00000639483 E4F1Q66K89 784 aaPredicted RBP17.96■□□□□ 0.47
KCNMA1-260ENST00000639483 TXLNBQ8N3L3 684 aa17.96■□□□□ 0.47
KCNMA1-260ENST00000639483 GOLGA1Q92805 767 aa17.96■□□□□ 0.47
KCNMA1-260ENST00000639483 ACBD3Q9H3P7 528 aa17.96■□□□□ 0.47
KCNMA1-260ENST00000639483 PSMD14O00487 310 aa17.96■□□□□ 0.47
KCNMA1-260ENST00000639483 SLC37A4O43826 429 aa17.96■□□□□ 0.47
KCNMA1-260ENST00000639483 TACC1O75410 805 aa17.96■□□□□ 0.47
KCNMA1-260ENST00000639483 SHROOM1Q2M3G4 852 aaPredicted RBP17.96■□□□□ 0.47
KCNMA1-260ENST00000639483 ARHGAP27Q6ZUM4 889 aa17.96■□□□□ 0.47
KCNMA1-260ENST00000639483 SLFN12Q8IYM2 578 aa17.96■□□□□ 0.47
KCNMA1-260ENST00000639483 CUEDC2Q9H467 287 aa17.96■□□□□ 0.47
KCNMA1-260ENST00000639483 MRPL11Q9Y3B7 192 aaKnown RBP17.96■□□□□ 0.47
KCNMA1-260ENST00000639483 EPN1Q9Y6I3 576 aaPredicted RBP17.96■□□□□ 0.47
KCNMA1-260ENST00000639483 PKD1L3Q7Z443 1732 aa17.96■□□□□ 0.47
KCNMA1-260ENST00000639483 CLIC2O15247 247 aa17.96■□□□□ 0.47
KCNMA1-260ENST00000639483 DHTKD1Q96HY7 919 aaPredicted RBP17.96■□□□□ 0.47
KCNMA1-260ENST00000639483 PLEKHA4Q9H4M7 779 aa17.96■□□□□ 0.47
KCNMA1-260ENST00000639483 DPEP1P16444 411 aa17.95■□□□□ 0.46
KCNMA1-260ENST00000639483 NAPGQ99747 312 aaPredicted RBP17.95■□□□□ 0.46
KCNMA1-260ENST00000639483 KRT13P13646 458 aa17.95■□□□□ 0.46
KCNMA1-260ENST00000639483 IBSPP21815 317 aaPredicted RBP17.95■□□□□ 0.46
KCNMA1-260ENST00000639483 DALRD3Q5D0E6 543 aaKnown RBP17.95■□□□□ 0.46
KCNMA1-260ENST00000639483 LSM14BQ9BX40 385 aaKnown RBP17.95■□□□□ 0.46
KCNMA1-260ENST00000639483 TRIM9Q9C026 710 aa17.95■□□□□ 0.46
KCNMA1-260ENST00000639483 PIM2Q9P1W9 311 aa17.95■□□□□ 0.46
KCNMA1-260ENST00000639483 hCG_1984214I3L0E3 225 aa17.95■□□□□ 0.46
KCNMA1-260ENST00000639483 GCFC2P16383 781 aaKnown RBP17.95■□□□□ 0.46
KCNMA1-260ENST00000639483 RPL13P26373 211 aaKnown RBP17.95■□□□□ 0.46
KCNMA1-260ENST00000639483 ECE1P42892 770 aa17.95■□□□□ 0.46
KCNMA1-260ENST00000639483 MAGEA1P43355 309 aa17.95■□□□□ 0.46
KCNMA1-260ENST00000639483 FUT2Q10981 343 aa17.95■□□□□ 0.46
KCNMA1-260ENST00000639483 TNFAIP1Q13829 316 aa17.95■□□□□ 0.46
KCNMA1-260ENST00000639483 ZNF713Q8N859 430 aaPredicted RBP17.95■□□□□ 0.46
KCNMA1-260ENST00000639483 TAOK3Q9H2K8 898 aa17.95■□□□□ 0.46
KCNMA1-260ENST00000639483 ARFGAP3Q9NP61 516 aa17.95■□□□□ 0.46
KCNMA1-260ENST00000639483 STK17AQ9UEE5 414 aa17.95■□□□□ 0.46
KCNMA1-260ENST00000639483 RABGAP1Q9Y3P9 1069 aa17.95■□□□□ 0.46
KCNMA1-260ENST00000639483 PDS5AQ29RF7 1337 aaKnown RBP17.95■□□□□ 0.46
KCNMA1-260ENST00000639483 COL1A1P02452 1464 aaPredicted RBP17.95■□□□□ 0.46
KCNMA1-260ENST00000639483 FOSP01100 380 aaPredicted RBP17.95■□□□□ 0.46
KCNMA1-260ENST00000639483 EPB41P11171 864 aaKnown RBP17.95■□□□□ 0.46
KCNMA1-260ENST00000639483 BMP6P22004 513 aa17.95■□□□□ 0.46
KCNMA1-260ENST00000639483 SSR1P43307 286 aaKnown RBP17.95■□□□□ 0.46
KCNMA1-260ENST00000639483 USP54Q70EL1 1684 aa17.94■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms