RNA–Protein interactions for RNA: ENST00000638914.1

PAX6-245, Transcript of paired box 6, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PAX6, Length 7,300 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX6-245ENST00000638914 USP17L10C9JJH3 530 aa12.83□□□□□ -0.36
PAX6-245ENST00000638914 RRP9O43818 475 aaKnown RBP12.83□□□□□ -0.36
PAX6-245ENST00000638914 RNF219Q5W0B1 726 aaPredicted RBP12.83□□□□□ -0.36
PAX6-245ENST00000638914 DSTYKQ6XUX3 929 aa12.83□□□□□ -0.36
PAX6-245ENST00000638914 BBOF1Q8ND07 529 aa12.83□□□□□ -0.36
PAX6-245ENST00000638914 PARD3BQ8TEW8 1205 aa12.83□□□□□ -0.36
PAX6-245ENST00000638914 UIMC1Q96RL1 719 aa12.83□□□□□ -0.36
PAX6-245ENST00000638914 SRP68Q9UHB9 627 aaKnown RBP12.83□□□□□ -0.36
PAX6-245ENST00000638914 HECW2Q9P2P5 1572 aa12.83□□□□□ -0.36
PAX6-245ENST00000638914 JAK3P52333 1124 aa12.83□□□□□ -0.36
PAX6-245ENST00000638914 LRMPQ12912 555 aa12.83□□□□□ -0.36
PAX6-245ENST00000638914 USP17L2Q6R6M4 530 aa12.83□□□□□ -0.36
PAX6-245ENST00000638914 MIGA2Q7L4E1 593 aa12.83□□□□□ -0.36
PAX6-245ENST00000638914 SKAP1Q86WV1 359 aa12.83□□□□□ -0.36
PAX6-245ENST00000638914 RBM46Q8TBY0 533 aaKnown RBP12.83□□□□□ -0.36
PAX6-245ENST00000638914 GANCQ8TET4 914 aa12.83□□□□□ -0.36
PAX6-245ENST00000638914 DCAF4Q8WV16 495 aa12.83□□□□□ -0.36
PAX6-245ENST00000638914 IFIH1Q9BYX4 1025 aaKnown RBP12.83□□□□□ -0.36
PAX6-245ENST00000638914 K7ERI5 159 aa12.83□□□□□ -0.36
PAX6-245ENST00000638914 HHATQ5VTY9 493 aa12.83□□□□□ -0.36
PAX6-245ENST00000638914 KRT222Q8N1A0 295 aa12.83□□□□□ -0.36
PAX6-245ENST00000638914 RBSNQ9H1K0 784 aa12.83□□□□□ -0.36
PAX6-245ENST00000638914 RPF1Q9H9Y2 349 aaKnown RBP12.83□□□□□ -0.36
PAX6-245ENST00000638914 PLCB1Q9NQ66 1216 aa12.83□□□□□ -0.36
PAX6-245ENST00000638914 TYW1Q9NV66 732 aaKnown RBP12.83□□□□□ -0.36
PAX6-245ENST00000638914 TAB2Q9NYJ8 693 aa12.83□□□□□ -0.36
PAX6-245ENST00000638914 NCAPD2Q15021 1401 aa12.83□□□□□ -0.36
PAX6-245ENST00000638914 ADGRL3Q9HAR2 1447 aa12.83□□□□□ -0.36
PAX6-245ENST00000638914 ERVK-7P63135 1459 aa12.83□□□□□ -0.36
PAX6-245ENST00000638914 LDHAP00338 332 aaKnown RBP12.83□□□□□ -0.36
PAX6-245ENST00000638914 S100BP04271 92 aaPredicted RBP12.83□□□□□ -0.36
PAX6-245ENST00000638914 ARHGAP4P98171 946 aa12.83□□□□□ -0.36
PAX6-245ENST00000638914 KCTD1Q719H9 257 aa12.83□□□□□ -0.36
PAX6-245ENST00000638914 ZBBXA8MT70 800 aa12.82□□□□□ -0.36
PAX6-245ENST00000638914 EBAG9O00559 213 aa12.82□□□□□ -0.36
PAX6-245ENST00000638914 PFKFB2O60825 505 aa12.82□□□□□ -0.36
PAX6-245ENST00000638914 KRT15P19012 456 aa12.82□□□□□ -0.36
PAX6-245ENST00000638914 NNMTP40261 264 aa12.82□□□□□ -0.36
PAX6-245ENST00000638914 ZMYM1Q5SVZ6 1142 aa12.82□□□□□ -0.36
PAX6-245ENST00000638914 MCPH1Q8NEM0 835 aa12.82□□□□□ -0.36
PAX6-245ENST00000638914 FOXP1Q9H334 677 aaPredicted RBP12.82□□□□□ -0.36
PAX6-245ENST00000638914 FAM207AQ9NSI2 230 aaPredicted RBP12.82□□□□□ -0.36
PAX6-245ENST00000638914 FEM1BQ9UK73 627 aa12.82□□□□□ -0.36
PAX6-245ENST00000638914 PCDHA4Q9UN74 947 aa12.82□□□□□ -0.36
PAX6-245ENST00000638914 ABCC4O15439 1325 aa12.82□□□□□ -0.36
PAX6-245ENST00000638914 ECE1P42892 770 aa12.82□□□□□ -0.36
PAX6-245ENST00000638914 PPFIBP2Q8ND30 876 aa12.82□□□□□ -0.36
PAX6-245ENST00000638914 LSM14BQ9BX40 385 aaKnown RBP12.82□□□□□ -0.36
PAX6-245ENST00000638914 NLRC4Q9NPP4 1024 aa12.82□□□□□ -0.36
PAX6-245ENST00000638914 SEC31BQ9NQW1 1179 aa12.82□□□□□ -0.36
PAX6-245ENST00000638914 MYO1FO00160 1098 aa12.82□□□□□ -0.36
PAX6-245ENST00000638914 SATB1Q01826 763 aa12.82□□□□□ -0.36
PAX6-245ENST00000638914 KCNV1Q6PIU1 500 aa12.82□□□□□ -0.36
PAX6-245ENST00000638914 PIDD1Q9HB75 910 aa12.82□□□□□ -0.36
PAX6-245ENST00000638914 GPBP1L1Q9HC44 474 aaPredicted RBP12.82□□□□□ -0.36
PAX6-245ENST00000638914 FCER1AP12319 257 aa12.82□□□□□ -0.36
PAX6-245ENST00000638914 CRKP46108 304 aa12.82□□□□□ -0.36
PAX6-245ENST00000638914 STMN2Q93045 179 aa12.82□□□□□ -0.36
PAX6-245ENST00000638914 MYL3P08590 195 aa12.82□□□□□ -0.36
PAX6-245ENST00000638914 PSMC2P35998 433 aaKnown RBP12.82□□□□□ -0.36
PAX6-245ENST00000638914 PAK2Q13177 524 aa12.82□□□□□ -0.36
PAX6-245ENST00000638914 CTAGE3PQ8IX95 158 aa12.82□□□□□ -0.36
PAX6-245ENST00000638914 SIX6OS1Q8N1H7 587 aa12.82□□□□□ -0.36
PAX6-245ENST00000638914 ADGBQ8N7X0 1667 aa12.82□□□□□ -0.36
PAX6-245ENST00000638914 GBP1P32455 592 aa12.82□□□□□ -0.36
PAX6-245ENST00000638914 ADD2P35612 726 aa12.82□□□□□ -0.36
PAX6-245ENST00000638914 TFAMQ00059 246 aaKnown RBP12.82□□□□□ -0.36
PAX6-245ENST00000638914 PTGDRQ13258 359 aa12.82□□□□□ -0.36
PAX6-245ENST00000638914 ARL13BQ3SXY8 428 aa12.82□□□□□ -0.36
PAX6-245ENST00000638914 HERC5Q9UII4 1024 aaKnown RBP12.82□□□□□ -0.36
PAX6-245ENST00000638914 TNPO2O14787 897 aaKnown RBP12.81□□□□□ -0.36
PAX6-245ENST00000638914 SORBS3O60504 671 aa12.81□□□□□ -0.36
PAX6-245ENST00000638914 ADD1P35611 737 aaKnown RBP12.81□□□□□ -0.36
PAX6-245ENST00000638914 TNFAIP2Q03169 654 aa12.81□□□□□ -0.36
PAX6-245ENST00000638914 CDC37Q16543 378 aaPredicted RBP12.81□□□□□ -0.36
PAX6-245ENST00000638914 U2AF1L4Q8WU68 220 aaKnown RBP12.81□□□□□ -0.36
PAX6-245ENST00000638914 PCDHB4Q9Y5E5 795 aa12.81□□□□□ -0.36
PAX6-245ENST00000638914 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.81□□□□□ -0.36
PAX6-245ENST00000638914 PNMA6FA0A0J9YX94 578 aa12.81□□□□□ -0.36
PAX6-245ENST00000638914 GARSP41250 739 aaKnown RBP12.81□□□□□ -0.36
PAX6-245ENST00000638914 AP3B2Q13367 1082 aa12.81□□□□□ -0.36
PAX6-245ENST00000638914 KRT12Q99456 494 aa12.81□□□□□ -0.36
PAX6-245ENST00000638914 SLF1Q9BQI6 1058 aa12.81□□□□□ -0.36
PAX6-245ENST00000638914 DENND3A2RUS2 1198 aa12.81□□□□□ -0.36
PAX6-245ENST00000638914 H2AFZP0C0S5 128 aa12.81□□□□□ -0.36
PAX6-245ENST00000638914 ARL4AP40617 200 aa12.81□□□□□ -0.36
PAX6-245ENST00000638914 RNASE9P60153 205 aaKnown RBP12.81□□□□□ -0.36
PAX6-245ENST00000638914 EXOC3L4Q17RC7 722 aa12.81□□□□□ -0.36
PAX6-245ENST00000638914 H2AFVQ71UI9 128 aa12.81□□□□□ -0.36
PAX6-245ENST00000638914 HDXQ7Z353 690 aa12.81□□□□□ -0.36
PAX6-245ENST00000638914 DGKHQ86XP1 1220 aa12.81□□□□□ -0.36
PAX6-245ENST00000638914 NSUN6Q8TEA1 469 aaKnown RBP12.81□□□□□ -0.36
PAX6-245ENST00000638914 LARP4BQ92615 738 aaKnown RBP12.81□□□□□ -0.36
PAX6-245ENST00000638914 GPKOWQ92917 476 aaPredicted RBP eCLIP12.81□□□□□ -0.36
PAX6-245ENST00000638914 SLC38A10Q9HBR0 1119 aa12.81□□□□□ -0.36
PAX6-245ENST00000638914 EEPD1Q7L9B9 569 aa12.81□□□□□ -0.36
PAX6-245ENST00000638914 RUNDC3BQ96NL0 473 aa12.81□□□□□ -0.36
PAX6-245ENST00000638914 CLASP1Q7Z460 1538 aa12.81□□□□□ -0.36
PAX6-245ENST00000638914 TTBK2Q6IQ55 1244 aa12.81□□□□□ -0.36
PAX6-245ENST00000638914 C7orf31Q8N865 590 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms