RNA–Protein interactions for RNA: ENST00000637968.1

SCN1A-216, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 5

Gene SCN1A, Length 4,614 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-216ENST00000637968 ENAHQ8N8S7 591 aaPredicted RBP6.26□□□□□ -1.41
SCN1A-216ENST00000637968 RBBP8NLQ8NC74 664 aaPredicted RBP6.26□□□□□ -1.41
SCN1A-216ENST00000637968 L3MBTL3Q96JM7 780 aaPredicted RBP6.26□□□□□ -1.41
SCN1A-216ENST00000637968 INTS9Q9NV88 658 aaKnown RBP6.26□□□□□ -1.41
SCN1A-216ENST00000637968 NOVA2Q9UNW9 492 aaKnown RBP6.26□□□□□ -1.41
SCN1A-216ENST00000637968 CBFA2T3O75081 653 aa6.25□□□□□ -1.41
SCN1A-216ENST00000637968 BAG3O95817 575 aa6.25□□□□□ -1.41
SCN1A-216ENST00000637968 GNAI2P04899 355 aa6.25□□□□□ -1.41
SCN1A-216ENST00000637968 PYGMP11217 842 aa6.25□□□□□ -1.41
SCN1A-216ENST00000637968 CPA1P15085 419 aa6.25□□□□□ -1.41
SCN1A-216ENST00000637968 PEX5P50542 639 aa6.25□□□□□ -1.41
SCN1A-216ENST00000637968 AIMP1Q12904 312 aaKnown RBP6.25□□□□□ -1.41
SCN1A-216ENST00000637968 KIF22Q14807 665 aa6.25□□□□□ -1.41
SCN1A-216ENST00000637968 PARP10Q53GL7 1025 aa6.25□□□□□ -1.41
SCN1A-216ENST00000637968 MAP3K21Q5TCX8 1036 aa6.25□□□□□ -1.41
SCN1A-216ENST00000637968 CREB3L3Q68CJ9 461 aa6.25□□□□□ -1.41
SCN1A-216ENST00000637968 ABTB2Q8N961 1025 aa6.25□□□□□ -1.41
SCN1A-216ENST00000637968 PRPF31Q8WWY3 499 aaKnown RBP6.25□□□□□ -1.41
SCN1A-216ENST00000637968 CCDC42Q96M95 316 aa6.25□□□□□ -1.41
SCN1A-216ENST00000637968 OXCT2Q9BYC2 517 aaPredicted RBP6.25□□□□□ -1.41
SCN1A-216ENST00000637968 RETREG1Q9H6L5 497 aa6.25□□□□□ -1.41
SCN1A-216ENST00000637968 SENP2Q9HC62 589 aa6.25□□□□□ -1.41
SCN1A-216ENST00000637968 SPG7Q9UQ90 795 aa6.25□□□□□ -1.41
SCN1A-216ENST00000637968 NFE2L3Q9Y4A8 694 aa6.25□□□□□ -1.41
SCN1A-216ENST00000637968 SBNO1A3KN83 1393 aa6.25□□□□□ -1.41
SCN1A-216ENST00000637968 TLDC2A0PJX2 215 aa6.25□□□□□ -1.41
SCN1A-216ENST00000637968 SPTLC2O15270 562 aa6.25□□□□□ -1.41
SCN1A-216ENST00000637968 TCP1P17987 556 aaKnown RBP6.25□□□□□ -1.41
SCN1A-216ENST00000637968 POLR2EP19388 210 aaKnown RBP6.25□□□□□ -1.41
SCN1A-216ENST00000637968 COPB2P35606 906 aa6.25□□□□□ -1.41
SCN1A-216ENST00000637968 IKQ13123 557 aaPredicted RBP6.25□□□□□ -1.41
SCN1A-216ENST00000637968 DAB2IPQ5VWQ8 1189 aa6.25□□□□□ -1.41
SCN1A-216ENST00000637968 ANO7Q6IWH7 933 aa6.25□□□□□ -1.41
SCN1A-216ENST00000637968 RBM46Q8TBY0 533 aaKnown RBP6.25□□□□□ -1.41
SCN1A-216ENST00000637968 ENOX1Q8TC92 643 aaKnown RBP6.25□□□□□ -1.41
SCN1A-216ENST00000637968 MMS19Q96T76 1030 aa6.25□□□□□ -1.41
SCN1A-216ENST00000637968 AASDHPPTQ9NRN7 309 aa6.25□□□□□ -1.41
SCN1A-216ENST00000637968 WDR7Q9Y4E6 1490 aa6.25□□□□□ -1.41
SCN1A-216ENST00000637968 UBAP1LF5GYI3 381 aa6.25□□□□□ -1.41
SCN1A-216ENST00000637968 GOLGA8TH3BQL2 631 aa6.25□□□□□ -1.41
SCN1A-216ENST00000637968 MATN2O00339 956 aa6.25□□□□□ -1.41
SCN1A-216ENST00000637968 GMNNO75496 209 aa6.25□□□□□ -1.41
SCN1A-216ENST00000637968 IFIT2P09913 472 aaKnown RBP6.25□□□□□ -1.41
SCN1A-216ENST00000637968 GOLGA8HP0CJ92 632 aa6.25□□□□□ -1.41
SCN1A-216ENST00000637968 CALB2P22676 271 aa6.25□□□□□ -1.41
SCN1A-216ENST00000637968 NOP14P78316 857 aaKnown RBP6.25□□□□□ -1.41
SCN1A-216ENST00000637968 ZNF268Q14587 947 aaPredicted RBP6.25□□□□□ -1.41
SCN1A-216ENST00000637968 FXNQ16595 210 aa6.25□□□□□ -1.41
SCN1A-216ENST00000637968 ADALQ6DHV7 355 aa6.25□□□□□ -1.41
SCN1A-216ENST00000637968 TMEM132EQ6IEE7 984 aa6.25□□□□□ -1.41
SCN1A-216ENST00000637968 ARHGAP24Q8N264 748 aa6.25□□□□□ -1.41
SCN1A-216ENST00000637968 MCUR1Q96AQ8 359 aa6.25□□□□□ -1.41
SCN1A-216ENST00000637968 CENPOQ9BU64 300 aa6.25□□□□□ -1.41
SCN1A-216ENST00000637968 CCDC28BQ9BUN5 200 aa6.25□□□□□ -1.41
SCN1A-216ENST00000637968 ETNK1Q9HBU6 452 aa6.25□□□□□ -1.41
SCN1A-216ENST00000637968 METTL14Q9HCE5 456 aaKnown RBP6.25□□□□□ -1.41
SCN1A-216ENST00000637968 MAGEC2Q9UBF1 373 aaPredicted RBP6.25□□□□□ -1.41
SCN1A-216ENST00000637968 CD2APQ9Y5K6 639 aa6.25□□□□□ -1.41
SCN1A-216ENST00000637968 BACH1O14867 736 aa6.24□□□□□ -1.41
SCN1A-216ENST00000637968 DTNBO60941 627 aa6.24□□□□□ -1.41
SCN1A-216ENST00000637968 ATP9AO75110 1047 aa6.24□□□□□ -1.41
SCN1A-216ENST00000637968 EIF2S1P05198 315 aaKnown RBP6.24□□□□□ -1.41
SCN1A-216ENST00000637968 ITGA2BP08514 1039 aa6.24□□□□□ -1.41
SCN1A-216ENST00000637968 UBTFL6P0CB48 400 aaPredicted RBP6.24□□□□□ -1.41
SCN1A-216ENST00000637968 COPS2P61201 443 aa6.24□□□□□ -1.41
SCN1A-216ENST00000637968 IGBP1P78318 339 aa6.24□□□□□ -1.41
SCN1A-216ENST00000637968 NMIQ13287 307 aaPredicted RBP6.24□□□□□ -1.41
SCN1A-216ENST00000637968 ZCWPW2Q504Y3 356 aa6.24□□□□□ -1.41
SCN1A-216ENST00000637968 PDCD4Q53EL6 469 aaKnown RBP6.24□□□□□ -1.41
SCN1A-216ENST00000637968 TTMPQ5BVD1 217 aa6.24□□□□□ -1.41
SCN1A-216ENST00000637968 BEND3Q5T5X7 828 aa6.24□□□□□ -1.41
SCN1A-216ENST00000637968 TRIM67Q6ZTA4 783 aa6.24□□□□□ -1.41
SCN1A-216ENST00000637968 NEK10Q6ZWH5 1172 aa6.24□□□□□ -1.41
SCN1A-216ENST00000637968 VPS36Q86VN1 386 aa6.24□□□□□ -1.41
SCN1A-216ENST00000637968 KIF2BQ8N4N8 673 aa6.24□□□□□ -1.41
SCN1A-216ENST00000637968 SYT2Q8N9I0 419 aaPredicted RBP6.24□□□□□ -1.41
SCN1A-216ENST00000637968 TUBGCP5Q96RT8 1024 aa6.24□□□□□ -1.41
SCN1A-216ENST00000637968 TM6SF1Q9BZW5 370 aa6.24□□□□□ -1.41
SCN1A-216ENST00000637968 RCOR1Q9UKL0 485 aa6.24□□□□□ -1.41
SCN1A-216ENST00000637968 ANGPTL2Q9UKU9 493 aa6.24□□□□□ -1.41
SCN1A-216ENST00000637968 FADS3Q9Y5Q0 445 aa6.24□□□□□ -1.41
SCN1A-216ENST00000637968 STK24Q9Y6E0 443 aa6.24□□□□□ -1.41
SCN1A-216ENST00000637968 ITIH6Q6UXX5 1313 aa6.24□□□□□ -1.41
SCN1A-216ENST00000637968 GOLGA8CPA6NN73 597 aa6.24□□□□□ -1.41
SCN1A-216ENST00000637968 EIF2B2P49770 351 aaKnown RBP6.24□□□□□ -1.41
SCN1A-216ENST00000637968 LMNB2Q03252 620 aa6.24□□□□□ -1.41
SCN1A-216ENST00000637968 SPAG1Q07617 926 aa6.24□□□□□ -1.41
SCN1A-216ENST00000637968 TAF7Q15545 349 aaPredicted RBP6.24□□□□□ -1.41
SCN1A-216ENST00000637968 CLPPQ16740 277 aaPredicted RBP6.24□□□□□ -1.41
SCN1A-216ENST00000637968 PTPN21Q16825 1174 aa6.24□□□□□ -1.41
SCN1A-216ENST00000637968 CFAP221Q4G0U5 840 aa6.24□□□□□ -1.41
SCN1A-216ENST00000637968 LRRC8BQ6P9F7 803 aa6.24□□□□□ -1.41
SCN1A-216ENST00000637968 ANO5Q75V66 913 aa6.24□□□□□ -1.41
SCN1A-216ENST00000637968 PPP1R42Q7Z4L9 355 aa6.24□□□□□ -1.41
SCN1A-216ENST00000637968 MYO1HQ8N1T3 1032 aa6.24□□□□□ -1.41
SCN1A-216ENST00000637968 LRRC43Q8N309 656 aa6.24□□□□□ -1.41
SCN1A-216ENST00000637968 PTPRN2Q92932 1015 aa6.24□□□□□ -1.41
SCN1A-216ENST00000637968 AGBL1Q96MI9 1066 aa6.24□□□□□ -1.41
SCN1A-216ENST00000637968 TBC1D23Q9NUY8 699 aa6.24□□□□□ -1.41
SCN1A-216ENST00000637968 SUPT6HQ7KZ85 1726 aaKnown RBP6.24□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms