RNA–Protein interactions for RNA: ENST00000637285.1

SCN1A-215, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 5

Gene SCN1A, Length 100 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-215ENST00000637285 TRIM8Q9BZR9 551 aa2.78□□□□□ -1.96
SCN1A-215ENST00000637285 SEMA4AQ9H3S1 761 aa2.78□□□□□ -1.96
SCN1A-215ENST00000637285 EHMT1Q9H9B1 1298 aa2.78□□□□□ -1.96
SCN1A-215ENST00000637285 FAM86C1Q9NVL1 165 aa2.78□□□□□ -1.96
SCN1A-215ENST00000637285 SUCOQ9UBS9 1254 aaKnown RBP2.78□□□□□ -1.96
SCN1A-215ENST00000637285 PARP2Q9UGN5 583 aa2.78□□□□□ -1.96
SCN1A-215ENST00000637285 TESMINQ9Y4I5 508 aa2.78□□□□□ -1.96
SCN1A-215ENST00000637285 C9orf118A6NHY6 69 aa2.77□□□□□ -1.97
SCN1A-215ENST00000637285 PATE3B3GLJ2 98 aa2.77□□□□□ -1.97
SCN1A-215ENST00000637285 B4GALT4O60513 344 aa2.77□□□□□ -1.97
SCN1A-215ENST00000637285 FUCA1P04066 466 aa2.77□□□□□ -1.97
SCN1A-215ENST00000637285 LMO1P25800 156 aa2.77□□□□□ -1.97
SCN1A-215ENST00000637285 MCM4P33991 863 aa2.77□□□□□ -1.97
SCN1A-215ENST00000637285 EPHB4P54760 987 aa2.77□□□□□ -1.97
SCN1A-215ENST00000637285 POU4F1Q01851 419 aa2.77□□□□□ -1.97
SCN1A-215ENST00000637285 PPP2R5DQ14738 602 aa2.77□□□□□ -1.97
SCN1A-215ENST00000637285 SEZ6Q53EL9 994 aa2.77□□□□□ -1.97
SCN1A-215ENST00000637285 EAPPQ56P03 285 aaPredicted RBP2.77□□□□□ -1.97
SCN1A-215ENST00000637285 PRR31Q5SQ13 230 aa2.77□□□□□ -1.97
SCN1A-215ENST00000637285 SLFN13Q68D06 897 aa2.77□□□□□ -1.97
SCN1A-215ENST00000637285 FBXL19Q6PCT2 694 aa2.77□□□□□ -1.97
SCN1A-215ENST00000637285 ZC3H18Q86VM9 953 aaKnown RBP2.77□□□□□ -1.97
SCN1A-215ENST00000637285 CPNE8Q86YQ8 564 aa2.77□□□□□ -1.97
SCN1A-215ENST00000637285 KBTBD2Q8IY47 623 aa2.77□□□□□ -1.97
SCN1A-215ENST00000637285 Q8TCH9 128 aa2.77□□□□□ -1.97
SCN1A-215ENST00000637285 FAM161BQ96MY7 647 aa2.77□□□□□ -1.97
SCN1A-215ENST00000637285 MTA3Q9BTC8 594 aa2.77□□□□□ -1.97
SCN1A-215ENST00000637285 TMEM168Q9H0V1 697 aa2.77□□□□□ -1.97
SCN1A-215ENST00000637285 NOL6Q9H6R4 1146 aaKnown RBP2.77□□□□□ -1.97
SCN1A-215ENST00000637285 L2HGDHQ9H9P8 463 aa2.77□□□□□ -1.97
SCN1A-215ENST00000637285 GP6Q9HCN6 339 aa2.77□□□□□ -1.97
SCN1A-215ENST00000637285 SF3B6Q9Y3B4 125 aaKnown RBP2.77□□□□□ -1.97
SCN1A-215ENST00000637285 ROBO2Q9HCK4 1378 aa2.76□□□□□ -1.97
SCN1A-215ENST00000637285 TNFRSF10CO14798 259 aa2.76□□□□□ -1.97
SCN1A-215ENST00000637285 TP53P04637 393 aaPredicted RBP2.76□□□□□ -1.97
SCN1A-215ENST00000637285 STAT5AP42229 794 aa2.76□□□□□ -1.97
SCN1A-215ENST00000637285 CRKP46108 304 aa2.76□□□□□ -1.97
SCN1A-215ENST00000637285 DAB2P98082 770 aa2.76□□□□□ -1.97
SCN1A-215ENST00000637285 PURAQ00577 322 aaKnown RBP2.76□□□□□ -1.97
SCN1A-215ENST00000637285 DPTQ07507 201 aa2.76□□□□□ -1.97
SCN1A-215ENST00000637285 LRRFIP1Q32MZ4 808 aaKnown RBP2.76□□□□□ -1.97
SCN1A-215ENST00000637285 HS1BP3Q53T59 392 aa2.76□□□□□ -1.97
SCN1A-215ENST00000637285 MIIPQ5JXC2 388 aa2.76□□□□□ -1.97
SCN1A-215ENST00000637285 RNF207Q6ZRF8 634 aa2.76□□□□□ -1.97
SCN1A-215ENST00000637285 ZG16BQ96DA0 208 aa2.76□□□□□ -1.97
SCN1A-215ENST00000637285 MBD6Q96DN6 1003 aa2.76□□□□□ -1.97
SCN1A-215ENST00000637285 ZSWIM3Q96MP5 696 aa2.76□□□□□ -1.97
SCN1A-215ENST00000637285 LRRC3Q9BY71 257 aa2.76□□□□□ -1.97
SCN1A-215ENST00000637285 KBTBD4Q9NVX7 518 aa2.76□□□□□ -1.97
SCN1A-215ENST00000637285 ZFR2Q9UPR6 939 aaKnown RBP2.76□□□□□ -1.97
SCN1A-215ENST00000637285 ZDHHC9Q9Y397 364 aa2.76□□□□□ -1.97
SCN1A-215ENST00000637285 SUPT16HQ9Y5B9 1047 aaKnown RBP2.76□□□□□ -1.97
SCN1A-215ENST00000637285 FHOD1Q9Y613 1164 aa2.76□□□□□ -1.97
SCN1A-215ENST00000637285 A0A087X1B8 175 aa2.75□□□□□ -1.97
SCN1A-215ENST00000637285 STXBP3O00186 592 aa2.75□□□□□ -1.97
SCN1A-215ENST00000637285 BRD1O95696 1058 aa2.75□□□□□ -1.97
SCN1A-215ENST00000637285 ZNF28P17035 718 aa2.75□□□□□ -1.97
SCN1A-215ENST00000637285 CD247P20963 164 aa2.75□□□□□ -1.97
SCN1A-215ENST00000637285 MCM7P33993 719 aa2.75□□□□□ -1.97
SCN1A-215ENST00000637285 IL13P35225 146 aa2.75□□□□□ -1.97
SCN1A-215ENST00000637285 EIF4A3P38919 411 aaKnown RBP2.75□□□□□ -1.97
SCN1A-215ENST00000637285 PMS1P54277 932 aaKnown RBP2.75□□□□□ -1.97
SCN1A-215ENST00000637285 DGCR2P98153 550 aa2.75□□□□□ -1.97
SCN1A-215ENST00000637285 XPCQ01831 940 aaPredicted RBP2.75□□□□□ -1.97
SCN1A-215ENST00000637285 PRKD1Q15139 912 aaPredicted RBP2.75□□□□□ -1.97
SCN1A-215ENST00000637285 LSM12Q3MHD2 195 aaKnown RBP2.75□□□□□ -1.97
SCN1A-215ENST00000637285 USP39Q53GS9 565 aaKnown RBP2.75□□□□□ -1.97
SCN1A-215ENST00000637285 AXDND1Q5T1B0 1012 aaPredicted RBP2.75□□□□□ -1.97
SCN1A-215ENST00000637285 EEF1DP3Q658K8 133 aa2.75□□□□□ -1.97
SCN1A-215ENST00000637285 DCP2Q8IU60 420 aaKnown RBP2.75□□□□□ -1.97
SCN1A-215ENST00000637285 NEU4Q8WWR8 484 aaPredicted RBP2.75□□□□□ -1.97
SCN1A-215ENST00000637285 ZNF503Q96F45 646 aa2.75□□□□□ -1.97
SCN1A-215ENST00000637285 YTHDC1Q96MU7 727 aaKnown RBP2.75□□□□□ -1.97
SCN1A-215ENST00000637285 CRAMP1Q96RY5 1269 aa2.75□□□□□ -1.97
SCN1A-215ENST00000637285 ADOQ96SZ5 270 aa2.75□□□□□ -1.97
SCN1A-215ENST00000637285 YIPF4Q9BSR8 244 aa2.75□□□□□ -1.97
SCN1A-215ENST00000637285 AP5M1Q9H0R1 490 aa2.75□□□□□ -1.97
SCN1A-215ENST00000637285 COPRSQ9NQ92 184 aa2.75□□□□□ -1.97
SCN1A-215ENST00000637285 ZNF451Q9Y4E5 1061 aa2.75□□□□□ -1.97
SCN1A-215ENST00000637285 IVNS1ABPQ9Y6Y0 642 aa2.75□□□□□ -1.97
SCN1A-215ENST00000637285 NARSO43776 548 aaKnown RBP2.74□□□□□ -1.97
SCN1A-215ENST00000637285 NPHS1O60500 1241 aa2.74□□□□□ -1.97
SCN1A-215ENST00000637285 GREM1O60565 184 aa2.74□□□□□ -1.97
SCN1A-215ENST00000637285 ITGA4P13612 1032 aa2.74□□□□□ -1.97
SCN1A-215ENST00000637285 SEPHS1P49903 392 aa2.74□□□□□ -1.97
SCN1A-215ENST00000637285 PTH1RQ03431 593 aa2.74□□□□□ -1.97
SCN1A-215ENST00000637285 ADAM9Q13443 819 aa2.74□□□□□ -1.97
SCN1A-215ENST00000637285 DPY19L1Q2PZI1 675 aa2.74□□□□□ -1.97
SCN1A-215ENST00000637285 RCSD1Q6JBY9 416 aa2.74□□□□□ -1.97
SCN1A-215ENST00000637285 DPY19L2P1Q6NXN4 242 aa2.74□□□□□ -1.97
SCN1A-215ENST00000637285 PKN3Q6P5Z2 889 aa2.74□□□□□ -1.97
SCN1A-215ENST00000637285 PPFIBP1Q86W92 1011 aa2.74□□□□□ -1.97
SCN1A-215ENST00000637285 MIB1Q86YT6 1006 aa2.74□□□□□ -1.97
SCN1A-215ENST00000637285 ADCY4Q8NFM4 1077 aa2.74□□□□□ -1.97
SCN1A-215ENST00000637285 ZNF296Q8WUU4 475 aaPredicted RBP2.74□□□□□ -1.97
SCN1A-215ENST00000637285 GNRHR2Q96P88 292 aa2.74□□□□□ -1.97
SCN1A-215ENST00000637285 ARID3AQ99856 593 aa2.74□□□□□ -1.97
SCN1A-215ENST00000637285 MCMBPQ9BTE3 642 aa2.74□□□□□ -1.97
SCN1A-215ENST00000637285 MEGF9Q9H1U4 602 aa2.74□□□□□ -1.97
SCN1A-215ENST00000637285 UBP1Q9NZI7 540 aa2.74□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 78 ms