RNA–Protein interactions for RNA: ENST00000636554.1

THUMPD1-206, Transcript of THUMP domain containing 1, humanhuman

TSL 5

Gene THUMPD1, Length 2,567 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD1-206ENST00000636554 NFU1Q9UMS0 254 aa16.63■□□□□ 0.25
THUMPD1-206ENST00000636554 ABCA3Q99758 1704 aa16.63■□□□□ 0.25
THUMPD1-206ENST00000636554 CYTH3O43739 400 aa16.63■□□□□ 0.25
THUMPD1-206ENST00000636554 ZEB2O60315 1214 aa16.63■□□□□ 0.25
THUMPD1-206ENST00000636554 NTSR2O95665 410 aa16.63■□□□□ 0.25
THUMPD1-206ENST00000636554 PRLRP16471 622 aa16.63■□□□□ 0.25
THUMPD1-206ENST00000636554 HNRNPH1P31943 449 aaKnown RBP16.63■□□□□ 0.25
THUMPD1-206ENST00000636554 SKOR1P84550 965 aa16.63■□□□□ 0.25
THUMPD1-206ENST00000636554 RASSF7Q02833 373 aa16.63■□□□□ 0.25
THUMPD1-206ENST00000636554 MECOMQ03112 1051 aa16.63■□□□□ 0.25
THUMPD1-206ENST00000636554 NNTQ13423 1086 aa16.63■□□□□ 0.25
THUMPD1-206ENST00000636554 MCTP2Q6DN12 878 aa16.63■□□□□ 0.25
THUMPD1-206ENST00000636554 PNMA1Q8ND90 353 aa16.63■□□□□ 0.25
THUMPD1-206ENST00000636554 NSUN4Q96CB9 384 aaKnown RBP16.63■□□□□ 0.25
THUMPD1-206ENST00000636554 CCDC43Q96MW1 224 aaKnown RBP16.63■□□□□ 0.25
THUMPD1-206ENST00000636554 CPVLQ9H3G5 476 aa16.63■□□□□ 0.25
THUMPD1-206ENST00000636554 NDST4Q9H3R1 872 aa16.63■□□□□ 0.25
THUMPD1-206ENST00000636554 IL17RBQ9NRM6 502 aa16.63■□□□□ 0.25
THUMPD1-206ENST00000636554 JAG2Q9Y219 1238 aa16.63■□□□□ 0.25
THUMPD1-206ENST00000636554 KIAA1551Q9HCM1 1747 aa16.63■□□□□ 0.25
THUMPD1-206ENST00000636554 VWA3BQ502W6 1294 aa16.62■□□□□ 0.25
THUMPD1-206ENST00000636554 KLHDC7AQ5VTJ3 777 aa16.62■□□□□ 0.25
THUMPD1-206ENST00000636554 C3orf67Q6ZVT6 689 aa16.62■□□□□ 0.25
THUMPD1-206ENST00000636554 NIP7Q9Y221 180 aaKnown RBP eCLIP16.62■□□□□ 0.25
THUMPD1-206ENST00000636554 ZNF233A6NK53 670 aa16.62■□□□□ 0.25
THUMPD1-206ENST00000636554 LCA5LO95447 670 aa16.62■□□□□ 0.25
THUMPD1-206ENST00000636554 MAGEA1P43355 309 aa16.62■□□□□ 0.25
THUMPD1-206ENST00000636554 GUCY1A3Q02108 690 aa16.62■□□□□ 0.25
THUMPD1-206ENST00000636554 LETM2Q2VYF4 491 aa16.62■□□□□ 0.25
THUMPD1-206ENST00000636554 RUBCNQ92622 972 aa16.62■□□□□ 0.25
THUMPD1-206ENST00000636554 RNPC3Q96LT9 517 aaKnown RBP16.62■□□□□ 0.25
THUMPD1-206ENST00000636554 USP17L8P0C7I0 530 aa16.61■□□□□ 0.25
THUMPD1-206ENST00000636554 PRDX5P30044 214 aa16.61■□□□□ 0.25
THUMPD1-206ENST00000636554 PAFAH1B1P43034 410 aa16.61■□□□□ 0.25
THUMPD1-206ENST00000636554 PPARDQ03181 441 aa16.61■□□□□ 0.25
THUMPD1-206ENST00000636554 ALS2CLQ60I27 953 aa16.61■□□□□ 0.25
THUMPD1-206ENST00000636554 IFT81Q8WYA0 676 aa16.61■□□□□ 0.25
THUMPD1-206ENST00000636554 FAM84BQ96KN1 310 aaPredicted RBP16.61■□□□□ 0.25
THUMPD1-206ENST00000636554 SH3GLB2Q9NR46 395 aa16.61■□□□□ 0.25
THUMPD1-206ENST00000636554 TCP11L1Q9NUJ3 509 aa16.61■□□□□ 0.25
THUMPD1-206ENST00000636554 MAD2L2Q9UI95 211 aa16.61■□□□□ 0.25
THUMPD1-206ENST00000636554 STXBP3O00186 592 aa16.61■□□□□ 0.25
THUMPD1-206ENST00000636554 CCNT1O60563 726 aaKnown RBP16.61■□□□□ 0.25
THUMPD1-206ENST00000636554 TECP42680 631 aa16.61■□□□□ 0.25
THUMPD1-206ENST00000636554 GUCY2FP51841 1108 aa16.61■□□□□ 0.25
THUMPD1-206ENST00000636554 NAP1L1P55209 391 aaKnown RBP16.61■□□□□ 0.25
THUMPD1-206ENST00000636554 TFAP4Q01664 338 aa16.61■□□□□ 0.25
THUMPD1-206ENST00000636554 TRADDQ15628 312 aa16.61■□□□□ 0.25
THUMPD1-206ENST00000636554 BAP1Q92560 729 aa16.61■□□□□ 0.25
THUMPD1-206ENST00000636554 C7orf25Q9BPX7 421 aa16.61■□□□□ 0.25
THUMPD1-206ENST00000636554 CAPN7Q9Y6W3 813 aa16.61■□□□□ 0.25
THUMPD1-206ENST00000636554 A0A0G2JS52 829 aa16.6■□□□□ 0.25
THUMPD1-206ENST00000636554 MYO1FO00160 1098 aa16.6■□□□□ 0.25
THUMPD1-206ENST00000636554 HEXIM1O94992 359 aaKnown RBP16.6■□□□□ 0.25
THUMPD1-206ENST00000636554 OR52Z1P0C646 297 aa16.6■□□□□ 0.25
THUMPD1-206ENST00000636554 GOLGA8HP0CJ92 632 aa16.6■□□□□ 0.25
THUMPD1-206ENST00000636554 GUCY2DQ02846 1103 aa16.6■□□□□ 0.25
THUMPD1-206ENST00000636554 CCDC47Q96A33 483 aaKnown RBP16.6■□□□□ 0.25
THUMPD1-206ENST00000636554 DYNLL2Q96FJ2 89 aa16.6■□□□□ 0.25
THUMPD1-206ENST00000636554 MMTAG2Q9BU76 263 aaKnown RBP16.6■□□□□ 0.25
THUMPD1-206ENST00000636554 EPB41L5Q9HCM4 733 aa16.6■□□□□ 0.25
THUMPD1-206ENST00000636554 USP17L3A6NCW0 530 aa16.6■□□□□ 0.25
THUMPD1-206ENST00000636554 USP17L4A6NCW7 530 aa16.6■□□□□ 0.25
THUMPD1-206ENST00000636554 TNFRSF8P28908 595 aa16.6■□□□□ 0.25
THUMPD1-206ENST00000636554 CAVIN4Q5BKX8 364 aa16.6■□□□□ 0.25
THUMPD1-206ENST00000636554 INTS5Q6P9B9 1019 aaKnown RBP16.6■□□□□ 0.25
THUMPD1-206ENST00000636554 USP17L1Q7RTZ2 530 aa16.6■□□□□ 0.25
THUMPD1-206ENST00000636554 POTEDQ86YR6 584 aa16.6■□□□□ 0.25
THUMPD1-206ENST00000636554 CRNKL1Q9BZJ0 848 aaKnown RBP16.6■□□□□ 0.25
THUMPD1-206ENST00000636554 MCM9Q9NXL9 1143 aa16.6■□□□□ 0.25
THUMPD1-206ENST00000636554 PACSIN2Q9UNF0 486 aaPredicted RBP16.6■□□□□ 0.25
THUMPD1-206ENST00000636554 CAMTA2O94983 1202 aa16.59■□□□□ 0.25
THUMPD1-206ENST00000636554 FTCDO95954 541 aa16.59■□□□□ 0.25
THUMPD1-206ENST00000636554 PRPHP41219 470 aa16.59■□□□□ 0.25
THUMPD1-206ENST00000636554 MNAT1P51948 309 aa16.59■□□□□ 0.25
THUMPD1-206ENST00000636554 RNASE9P60153 205 aaKnown RBP16.59■□□□□ 0.25
THUMPD1-206ENST00000636554 KCTD19Q17RG1 926 aaPredicted RBP16.59■□□□□ 0.25
THUMPD1-206ENST00000636554 TDRD12Q587J7 1177 aaKnown RBP16.59■□□□□ 0.25
THUMPD1-206ENST00000636554 CENPPQ6IPU0 288 aa16.59■□□□□ 0.25
THUMPD1-206ENST00000636554 CNNM4Q6P4Q7 775 aa16.59■□□□□ 0.25
THUMPD1-206ENST00000636554 DYMQ7RTS9 669 aa16.59■□□□□ 0.25
THUMPD1-206ENST00000636554 GLIS3Q8NEA6 775 aa16.59■□□□□ 0.25
THUMPD1-206ENST00000636554 PIK3R5Q8WYR1 880 aa16.59■□□□□ 0.25
THUMPD1-206ENST00000636554 CUEDC2Q9H467 287 aa16.59■□□□□ 0.25
THUMPD1-206ENST00000636554 ADAMTS2O95450 1211 aa16.59■□□□□ 0.25
THUMPD1-206ENST00000636554 LSP1P33241 339 aa16.59■□□□□ 0.25
THUMPD1-206ENST00000636554 ASTE1Q2TB18 679 aaPredicted RBP16.59■□□□□ 0.25
THUMPD1-206ENST00000636554 NLRC4Q9NPP4 1024 aa16.59■□□□□ 0.25
THUMPD1-206ENST00000636554 GDF3Q9NR23 364 aa16.59■□□□□ 0.25
THUMPD1-206ENST00000636554 GEMIN8Q9NWZ8 242 aaKnown RBP16.59■□□□□ 0.25
THUMPD1-206ENST00000636554 BARHL2Q9NY43 387 aa16.59■□□□□ 0.25
THUMPD1-206ENST00000636554 ARPP21Q9UBL0 812 aaPredicted RBP16.59■□□□□ 0.25
THUMPD1-206ENST00000636554 LOC102724159A0A0B4J2E5 919 aa16.58■□□□□ 0.25
THUMPD1-206ENST00000636554 GRM4Q14833 912 aa16.58■□□□□ 0.25
THUMPD1-206ENST00000636554 PWP2Q15269 919 aaKnown RBP16.58■□□□□ 0.25
THUMPD1-206ENST00000636554 MAN2A1Q16706 1144 aa16.58■□□□□ 0.25
THUMPD1-206ENST00000636554 CFAP58Q5T655 872 aa16.58■□□□□ 0.25
THUMPD1-206ENST00000636554 HGSNATQ68CP4 663 aa16.58■□□□□ 0.25
THUMPD1-206ENST00000636554 IQCKQ8N0W5 287 aa16.58■□□□□ 0.25
THUMPD1-206ENST00000636554 CNPY4Q8N129 248 aa16.58■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms