RNA–Protein interactions for RNA: ENST00000635970.1

CLN8-209, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 5

Gene CLN8, Length 1,958 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-209ENST00000635970 PLXNB2O15031 1838 aa17.53■□□□□ 0.4
CLN8-209ENST00000635970 PHLPP2Q6ZVD8 1323 aa17.53■□□□□ 0.4
CLN8-209ENST00000635970 LIFRP42702 1097 aa17.53■□□□□ 0.4
CLN8-209ENST00000635970 SNAP25P60880 206 aa17.53■□□□□ 0.4
CLN8-209ENST00000635970 STK38Q15208 465 aa17.53■□□□□ 0.4
CLN8-209ENST00000635970 ELF2Q15723 593 aa17.53■□□□□ 0.4
CLN8-209ENST00000635970 PRPF38AQ8NAV1 312 aaKnown RBP17.53■□□□□ 0.4
CLN8-209ENST00000635970 NUP133Q8WUM0 1156 aa17.53■□□□□ 0.4
CLN8-209ENST00000635970 ADAMTS5Q9UNA0 930 aa17.53■□□□□ 0.4
CLN8-209ENST00000635970 RABGAP1Q9Y3P9 1069 aa17.53■□□□□ 0.4
CLN8-209ENST00000635970 SMCHD1A6NHR9 2005 aa17.53■□□□□ 0.4
CLN8-209ENST00000635970 CBFA2T2O43439 604 aa17.52■□□□□ 0.4
CLN8-209ENST00000635970 PARP1P09874 1014 aaKnown RBP17.52■□□□□ 0.4
CLN8-209ENST00000635970 PLS1Q14651 629 aa17.52■□□□□ 0.4
CLN8-209ENST00000635970 TMEM132BQ14DG7 1078 aa17.52■□□□□ 0.4
CLN8-209ENST00000635970 CATIPQ7Z7H3 387 aa17.52■□□□□ 0.4
CLN8-209ENST00000635970 FCHSD1Q86WN1 690 aa17.52■□□□□ 0.4
CLN8-209ENST00000635970 REPS2Q8NFH8 660 aa17.52■□□□□ 0.4
CLN8-209ENST00000635970 GPRC5AQ8NFJ5 357 aa17.52■□□□□ 0.4
CLN8-209ENST00000635970 GTF3C2Q8WUA4 911 aaPredicted RBP17.52■□□□□ 0.4
CLN8-209ENST00000635970 UBA5Q9GZZ9 404 aa17.52■□□□□ 0.4
CLN8-209ENST00000635970 PORCNQ9H237 461 aa17.52■□□□□ 0.4
CLN8-209ENST00000635970 ARGLU1Q9NWB6 273 aaPredicted RBP17.52■□□□□ 0.4
CLN8-209ENST00000635970 MAD2L2Q9UI95 211 aa17.52■□□□□ 0.4
CLN8-209ENST00000635970 PRR12Q9ULL5 1215 aa17.52■□□□□ 0.4
CLN8-209ENST00000635970 ATP8B1O43520 1251 aa17.51■□□□□ 0.39
CLN8-209ENST00000635970 FAM160B2Q86V87 743 aa17.51■□□□□ 0.39
CLN8-209ENST00000635970 SGMS1Q86VZ5 419 aa17.51■□□□□ 0.39
CLN8-209ENST00000635970 CHURC1Q8WUH1 139 aa17.51■□□□□ 0.39
CLN8-209ENST00000635970 FTOQ9C0B1 505 aaKnown RBP eCLIP17.51■□□□□ 0.39
CLN8-209ENST00000635970 XPO4Q9C0E2 1151 aaKnown RBP17.51■□□□□ 0.39
CLN8-209ENST00000635970 SPTLC2O15270 562 aa17.51■□□□□ 0.39
CLN8-209ENST00000635970 SMC2O95347 1197 aa17.51■□□□□ 0.39
CLN8-209ENST00000635970 CMA1P23946 247 aa17.51■□□□□ 0.39
CLN8-209ENST00000635970 NDUFA8P51970 172 aa17.51■□□□□ 0.39
CLN8-209ENST00000635970 CCT2P78371 535 aaKnown RBP17.51■□□□□ 0.39
CLN8-209ENST00000635970 GRM4Q14833 912 aa17.51■□□□□ 0.39
CLN8-209ENST00000635970 ASPRV1Q53RT3 343 aa17.51■□□□□ 0.39
CLN8-209ENST00000635970 GPATCH4Q5T3I0 446 aaKnown RBP17.51■□□□□ 0.39
CLN8-209ENST00000635970 MICU3Q86XE3 530 aa17.51■□□□□ 0.39
CLN8-209ENST00000635970 ZNF214Q9UL59 606 aaPredicted RBP17.51■□□□□ 0.39
CLN8-209ENST00000635970 SLC12A7Q9Y666 1083 aa17.51■□□□□ 0.39
CLN8-209ENST00000635970 BAZ2BQ9UIF8 2168 aaKnown RBP17.51■□□□□ 0.39
CLN8-209ENST00000635970 PLA2G6O60733 806 aa17.5■□□□□ 0.39
CLN8-209ENST00000635970 DDAH1O94760 285 aa17.5■□□□□ 0.39
CLN8-209ENST00000635970 TAL1P17542 331 aaPredicted RBP17.5■□□□□ 0.39
CLN8-209ENST00000635970 PSMC4P43686 418 aa17.5■□□□□ 0.39
CLN8-209ENST00000635970 SYDE2Q5VT97 1194 aa17.5■□□□□ 0.39
CLN8-209ENST00000635970 APOA5Q6Q788 366 aa17.5■□□□□ 0.39
CLN8-209ENST00000635970 BTNL9Q6UXG8 535 aa17.5■□□□□ 0.39
CLN8-209ENST00000635970 TMC6Q7Z403 805 aa17.5■□□□□ 0.39
CLN8-209ENST00000635970 TMTC2Q8N394 836 aa17.5■□□□□ 0.39
CLN8-209ENST00000635970 MB21D1Q8N884 522 aa17.5■□□□□ 0.39
CLN8-209ENST00000635970 C8orf76Q96K31 380 aa17.5■□□□□ 0.39
CLN8-209ENST00000635970 TRIM47Q96LD4 638 aa17.5■□□□□ 0.39
CLN8-209ENST00000635970 SPATC1LQ9H0A9 340 aa17.5■□□□□ 0.39
CLN8-209ENST00000635970 EFCC1Q9HA90 598 aa17.5■□□□□ 0.39
CLN8-209ENST00000635970 SLC38A10Q9HBR0 1119 aa17.5■□□□□ 0.39
CLN8-209ENST00000635970 IFNKQ9P0W0 207 aa17.5■□□□□ 0.39
CLN8-209ENST00000635970 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP17.5■□□□□ 0.39
CLN8-209ENST00000635970 KLF18A0A0U1RQI7 1052 aa17.49■□□□□ 0.39
CLN8-209ENST00000635970 A0A1B0GVL5 298 aa17.49■□□□□ 0.39
CLN8-209ENST00000635970 ETF1P62495 437 aaKnown RBP17.49■□□□□ 0.39
CLN8-209ENST00000635970 ARMCX5Q6P1M9 558 aa17.49■□□□□ 0.39
CLN8-209ENST00000635970 SYNE3Q6ZMZ3 975 aa17.49■□□□□ 0.39
CLN8-209ENST00000635970 CPXCR1Q8N123 301 aa17.49■□□□□ 0.39
CLN8-209ENST00000635970 FBXO18Q8NFZ0 1043 aa17.49■□□□□ 0.39
CLN8-209ENST00000635970 MOV10L1Q9BXT6 1211 aaKnown RBP17.49■□□□□ 0.39
CLN8-209ENST00000635970 RAVER2Q9HCJ3 691 aaKnown RBP17.49■□□□□ 0.39
CLN8-209ENST00000635970 PALM3A6NDB9 673 aaPredicted RBP17.49■□□□□ 0.39
CLN8-209ENST00000635970 ZNF202O95125 648 aa17.49■□□□□ 0.39
CLN8-209ENST00000635970 FDPSP14324 419 aaKnown RBP17.49■□□□□ 0.39
CLN8-209ENST00000635970 SLC35G1Q2M3R5 365 aa17.49■□□□□ 0.39
CLN8-209ENST00000635970 DPCR1Q3MIW9 517 aa17.49■□□□□ 0.39
CLN8-209ENST00000635970 CCDC174Q6PII3 467 aa17.49■□□□□ 0.39
CLN8-209ENST00000635970 NAP1L2Q9ULW6 460 aaPredicted RBP17.49■□□□□ 0.39
CLN8-209ENST00000635970 KLRF2D3W0D1 207 aa17.48■□□□□ 0.39
CLN8-209ENST00000635970 FMNL1O95466 1100 aaPredicted RBP17.48■□□□□ 0.39
CLN8-209ENST00000635970 KIF22Q14807 665 aa17.48■□□□□ 0.39
CLN8-209ENST00000635970 WDR78Q5VTH9 848 aa17.48■□□□□ 0.39
CLN8-209ENST00000635970 MYSM1Q5VVJ2 828 aa17.48■□□□□ 0.39
CLN8-209ENST00000635970 CALCOCO1Q9P1Z2 691 aa17.48■□□□□ 0.39
CLN8-209ENST00000635970 ZNF536O15090 1300 aa17.48■□□□□ 0.39
CLN8-209ENST00000635970 GOLGA6L9A6NEM1 432 aa17.48■□□□□ 0.39
CLN8-209ENST00000635970 ZBED4O75132 1171 aa17.48■□□□□ 0.39
CLN8-209ENST00000635970 NCAPHQ15003 741 aa17.48■□□□□ 0.39
CLN8-209ENST00000635970 SNRNP48Q6IEG0 339 aaKnown RBP17.48■□□□□ 0.39
CLN8-209ENST00000635970 SYT10Q6XYQ8 523 aa17.48■□□□□ 0.39
CLN8-209ENST00000635970 OTOP1Q7RTM1 612 aa17.48■□□□□ 0.39
CLN8-209ENST00000635970 ADGRF4Q8IZF3 695 aa17.48■□□□□ 0.39
CLN8-209ENST00000635970 CMTR1Q8N1G2 835 aaKnown RBP17.48■□□□□ 0.39
CLN8-209ENST00000635970 RANBP17Q9H2T7 1088 aaKnown RBP17.48■□□□□ 0.39
CLN8-209ENST00000635970 RIPK3Q9Y572 518 aa17.48■□□□□ 0.39
CLN8-209ENST00000635970 TRIM17Q9Y577 477 aa17.48■□□□□ 0.39
CLN8-209ENST00000635970 CTDP1Q9Y5B0 961 aaPredicted RBP17.48■□□□□ 0.39
CLN8-209ENST00000635970 BRCA2P51587 3418 aa17.47■□□□□ 0.39
CLN8-209ENST00000635970 ZNFX1Q9P2E3 1918 aaKnown RBP17.47■□□□□ 0.39
CLN8-209ENST00000635970 GOLGA8BA8MQT2 603 aa17.47■□□□□ 0.39
CLN8-209ENST00000635970 TNPO2O14787 897 aaKnown RBP17.47■□□□□ 0.39
CLN8-209ENST00000635970 ZSCAN12O43309 604 aa17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms