RNA–Protein interactions for RNA: ENST00000635893.1

SCN1A-211, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 5

Gene SCN1A, Length 168 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-211ENST00000635893 ZNF761Q86XN6 746 aaPredicted RBP5.64□□□□□ -1.51
SCN1A-211ENST00000635893 ZNF654Q8IZM8 581 aa5.64□□□□□ -1.51
SCN1A-211ENST00000635893 ZBTB8AQ96BR9 441 aa5.64□□□□□ -1.51
SCN1A-211ENST00000635893 TMPRSS5Q9H3S3 457 aa5.64□□□□□ -1.51
SCN1A-211ENST00000635893 EFR3BQ9Y2G0 817 aa5.64□□□□□ -1.51
SCN1A-211ENST00000635893 SUGT1Q9Y2Z0 365 aa5.64□□□□□ -1.51
SCN1A-211ENST00000635893 NPHS1O60500 1241 aa5.63□□□□□ -1.51
SCN1A-211ENST00000635893 ITGB3P05106 788 aa5.63□□□□□ -1.51
SCN1A-211ENST00000635893 PUM1Q14671 1186 aaKnown RBP eCLIP5.63□□□□□ -1.51
SCN1A-211ENST00000635893 LINC00482Q8N8I6 264 aa5.63□□□□□ -1.51
SCN1A-211ENST00000635893 KLHL6Q8WZ60 621 aa5.63□□□□□ -1.51
SCN1A-211ENST00000635893 PCDH18Q9HCL0 1135 aa5.63□□□□□ -1.51
SCN1A-211ENST00000635893 C7orf72A4D263 438 aa5.62□□□□□ -1.51
SCN1A-211ENST00000635893 SMARCA5O60264 1052 aaPredicted RBP5.62□□□□□ -1.51
SCN1A-211ENST00000635893 NTRK1P04629 796 aa5.62□□□□□ -1.51
SCN1A-211ENST00000635893 CYP2C8P10632 490 aa5.62□□□□□ -1.51
SCN1A-211ENST00000635893 DDX11Q96FC9 970 aa5.62□□□□□ -1.51
SCN1A-211ENST00000635893 SCAMP3O14828 347 aaKnown RBP5.61□□□□□ -1.51
SCN1A-211ENST00000635893 FUCA1P04066 466 aa5.61□□□□□ -1.51
SCN1A-211ENST00000635893 SMAD4Q13485 552 aaKnown RBP5.61□□□□□ -1.51
SCN1A-211ENST00000635893 DCP2Q8IU60 420 aaKnown RBP5.61□□□□□ -1.51
SCN1A-211ENST00000635893 PLEKHO2Q8TD55 490 aa5.61□□□□□ -1.51
SCN1A-211ENST00000635893 RASGRP4Q8TDF6 673 aa5.61□□□□□ -1.51
SCN1A-211ENST00000635893 ADAMTS17Q8TE56 1095 aa5.61□□□□□ -1.51
SCN1A-211ENST00000635893 RBM15Q96T37 977 aaKnown RBP eCLIP5.61□□□□□ -1.51
SCN1A-211ENST00000635893 MMP19Q99542 508 aa5.61□□□□□ -1.51
SCN1A-211ENST00000635893 SMPD4Q9NXE4 827 aa5.61□□□□□ -1.51
SCN1A-211ENST00000635893 SIT1Q9Y3P8 196 aa5.61□□□□□ -1.51
SCN1A-211ENST00000635893 ANKRD34BA5PLL1 514 aa5.6□□□□□ -1.51
SCN1A-211ENST00000635893 C8BP07358 591 aa5.6□□□□□ -1.51
SCN1A-211ENST00000635893 ADAM17P78536 824 aa5.6□□□□□ -1.51
SCN1A-211ENST00000635893 PPP2R5EQ16537 467 aa5.6□□□□□ -1.51
SCN1A-211ENST00000635893 KIAA1211LQ6NV74 962 aa5.6□□□□□ -1.51
SCN1A-211ENST00000635893 ETV3LQ6ZN32 361 aa5.6□□□□□ -1.51
SCN1A-211ENST00000635893 CRACR2BQ8N4Y2 399 aaPredicted RBP5.6□□□□□ -1.51
SCN1A-211ENST00000635893 ZNF513Q8N8E2 541 aaPredicted RBP5.6□□□□□ -1.51
SCN1A-211ENST00000635893 COPS5Q92905 334 aa5.6□□□□□ -1.51
SCN1A-211ENST00000635893 GPRASP2Q96D09 838 aa5.6□□□□□ -1.51
SCN1A-211ENST00000635893 GORASP1Q9BQQ3 440 aa5.6□□□□□ -1.51
SCN1A-211ENST00000635893 C11orf84Q9BUA3 381 aaPredicted RBP5.6□□□□□ -1.51
SCN1A-211ENST00000635893 AP5M1Q9H0R1 490 aa5.6□□□□□ -1.51
SCN1A-211ENST00000635893 CLEC1BQ9P126 229 aa5.6□□□□□ -1.51
SCN1A-211ENST00000635893 AKT3Q9Y243 479 aa5.6□□□□□ -1.51
SCN1A-211ENST00000635893 PLS3P13797 630 aa5.59□□□□□ -1.51
SCN1A-211ENST00000635893 RPL13P26373 211 aaKnown RBP5.59□□□□□ -1.51
SCN1A-211ENST00000635893 THBS2P35442 1172 aa5.59□□□□□ -1.51
SCN1A-211ENST00000635893 CASP7P55210 303 aa5.59□□□□□ -1.51
SCN1A-211ENST00000635893 KIAA2012Q0VF49 1180 aa5.59□□□□□ -1.51
SCN1A-211ENST00000635893 TMCO4Q5TGY1 634 aa5.59□□□□□ -1.51
SCN1A-211ENST00000635893 POMZP3Q6PJE2 187 aa5.59□□□□□ -1.51
SCN1A-211ENST00000635893 KYQ8NBH2 561 aa5.59□□□□□ -1.51
SCN1A-211ENST00000635893 MARCH2Q9P0N8 246 aa5.59□□□□□ -1.51
SCN1A-211ENST00000635893 APEX2Q9UBZ4 518 aa5.59□□□□□ -1.51
SCN1A-211ENST00000635893 EMC9Q9Y3B6 208 aa5.59□□□□□ -1.51
SCN1A-211ENST00000635893 KCNH1O95259 989 aa5.58□□□□□ -1.52
SCN1A-211ENST00000635893 PLATP00750 562 aa5.58□□□□□ -1.52
SCN1A-211ENST00000635893 VAMP1P23763 118 aa5.58□□□□□ -1.52
SCN1A-211ENST00000635893 SCRN1Q12765 414 aa5.58□□□□□ -1.52
SCN1A-211ENST00000635893 RGL3Q3MIN7 710 aa5.58□□□□□ -1.52
SCN1A-211ENST00000635893 FAM26FQ5R3K3 315 aa5.58□□□□□ -1.52
SCN1A-211ENST00000635893 MBLAC2Q68D91 279 aa5.58□□□□□ -1.52
SCN1A-211ENST00000635893 VHLLQ6RSH7 139 aa5.58□□□□□ -1.52
SCN1A-211ENST00000635893 METTL16Q86W50 562 aaKnown RBP5.58□□□□□ -1.52
SCN1A-211ENST00000635893 MIB1Q86YT6 1006 aa5.58□□□□□ -1.52
SCN1A-211ENST00000635893 TTC9BQ8N6N2 239 aa5.58□□□□□ -1.52
SCN1A-211ENST00000635893 TTLL6Q8N841 843 aa5.58□□□□□ -1.52
SCN1A-211ENST00000635893 DPF3Q92784 378 aa5.58□□□□□ -1.52
SCN1A-211ENST00000635893 SHDQ96IW2 340 aa5.58□□□□□ -1.52
SCN1A-211ENST00000635893 SAMD11Q96NU1 681 aa5.58□□□□□ -1.52
SCN1A-211ENST00000635893 APBA2Q99767 749 aa5.58□□□□□ -1.52
SCN1A-211ENST00000635893 GPRC5CQ9NQ84 441 aa5.58□□□□□ -1.52
SCN1A-211ENST00000635893 SGSM2O43147 1006 aa5.57□□□□□ -1.52
SCN1A-211ENST00000635893 RECKO95980 971 aa5.57□□□□□ -1.52
SCN1A-211ENST00000635893 NAT2P11245 290 aa5.57□□□□□ -1.52
SCN1A-211ENST00000635893 GJA8P48165 433 aa5.57□□□□□ -1.52
SCN1A-211ENST00000635893 ZNF143P52747 638 aaPredicted RBP5.57□□□□□ -1.52
SCN1A-211ENST00000635893 TBC1D10BQ4KMP7 808 aaPredicted RBP5.57□□□□□ -1.52
SCN1A-211ENST00000635893 CD300LDQ6UXZ3 194 aa5.57□□□□□ -1.52
SCN1A-211ENST00000635893 FAM124AQ86V42 546 aa5.57□□□□□ -1.52
SCN1A-211ENST00000635893 ZC3H18Q86VM9 953 aaKnown RBP5.57□□□□□ -1.52
SCN1A-211ENST00000635893 LGI4Q8N135 537 aa5.57□□□□□ -1.52
SCN1A-211ENST00000635893 BVESQ8NE79 360 aa5.57□□□□□ -1.52
SCN1A-211ENST00000635893 CPLX3Q8WVH0 158 aa5.57□□□□□ -1.52
SCN1A-211ENST00000635893 SEC14L1Q92503 715 aa5.57□□□□□ -1.52
SCN1A-211ENST00000635893 C22orf46C9J442 243 aa5.56□□□□□ -1.52
SCN1A-211ENST00000635893 NOP56O00567 594 aaKnown RBP5.56□□□□□ -1.52
SCN1A-211ENST00000635893 THBDP07204 575 aa5.56□□□□□ -1.52
SCN1A-211ENST00000635893 SLC6A11P48066 632 aa5.56□□□□□ -1.52
SCN1A-211ENST00000635893 NASPP49321 788 aaPredicted RBP5.56□□□□□ -1.52
SCN1A-211ENST00000635893 CPZQ66K79 652 aa5.56□□□□□ -1.52
SCN1A-211ENST00000635893 BORAQ6PGQ7 559 aa5.56□□□□□ -1.52
SCN1A-211ENST00000635893 TEX2Q8IWB9 1127 aa5.56□□□□□ -1.52
SCN1A-211ENST00000635893 FAM26EQ8N5C1 309 aa5.56□□□□□ -1.52
SCN1A-211ENST00000635893 LOXL4Q96JB6 756 aa5.56□□□□□ -1.52
SCN1A-211ENST00000635893 SYT3Q9BQG1 590 aa5.56□□□□□ -1.52
SCN1A-211ENST00000635893 C1QTNF3Q9BXJ4 246 aa5.56□□□□□ -1.52
SCN1A-211ENST00000635893 NGRNQ9NPE2 291 aaKnown RBP5.56□□□□□ -1.52
SCN1A-211ENST00000635893 CYP26B1Q9NR63 512 aa5.56□□□□□ -1.52
SCN1A-211ENST00000635893 MROH6A6NGR9 719 aa5.55□□□□□ -1.52
SCN1A-211ENST00000635893 C1QTNF3-AMACRE9PGA6 284 aa5.55□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms