RNA–Protein interactions for RNA: ENST00000627620.2

SCN8A-209, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN8A, Length 5,943 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-209ENST00000627620 DHTKD1Q96HY7 919 aaPredicted RBP13.98□□□□□ -0.17
SCN8A-209ENST00000627620 ZNF215Q9UL58 517 aaPredicted RBP13.98□□□□□ -0.17
SCN8A-209ENST00000627620 PCDHB4Q9Y5E5 795 aa13.98□□□□□ -0.17
SCN8A-209ENST00000627620 PSMC2P35998 433 aaKnown RBP13.98□□□□□ -0.17
SCN8A-209ENST00000627620 LRRC41Q15345 812 aa13.98□□□□□ -0.17
SCN8A-209ENST00000627620 PI16Q6UXB8 463 aa13.98□□□□□ -0.17
SCN8A-209ENST00000627620 YEATS2Q9ULM3 1422 aa13.98□□□□□ -0.17
SCN8A-209ENST00000627620 GAP43P17677 238 aa13.98□□□□□ -0.17
SCN8A-209ENST00000627620 LMNB1P20700 586 aa13.98□□□□□ -0.17
SCN8A-209ENST00000627620 USP14P54578 494 aa13.98□□□□□ -0.17
SCN8A-209ENST00000627620 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.98□□□□□ -0.17
SCN8A-209ENST00000627620 ZBTB24O43167 697 aaPredicted RBP13.97□□□□□ -0.17
SCN8A-209ENST00000627620 ATP1A2P50993 1020 aa13.97□□□□□ -0.17
SCN8A-209ENST00000627620 CACNB1Q02641 598 aaPredicted RBP13.97□□□□□ -0.17
SCN8A-209ENST00000627620 MESDQ14696 234 aa13.97□□□□□ -0.17
SCN8A-209ENST00000627620 CC2D2BQ6DHV5 1058 aa13.97□□□□□ -0.17
SCN8A-209ENST00000627620 RINT1Q6NUQ1 792 aa13.97□□□□□ -0.17
SCN8A-209ENST00000627620 SMYD4Q8IYR2 804 aaPredicted RBP13.97□□□□□ -0.17
SCN8A-209ENST00000627620 BBOF1Q8ND07 529 aa13.97□□□□□ -0.17
SCN8A-209ENST00000627620 SLC7A3Q8WY07 619 aa13.97□□□□□ -0.17
SCN8A-209ENST00000627620 P2RX5Q93086 422 aa13.97□□□□□ -0.17
SCN8A-209ENST00000627620 PUS7LQ9H0K6 701 aaKnown RBP13.97□□□□□ -0.17
SCN8A-209ENST00000627620 SERPINB13Q9UIV8 391 aa13.97□□□□□ -0.17
SCN8A-209ENST00000627620 MAGI2Q86UL8 1455 aa13.97□□□□□ -0.17
SCN8A-209ENST00000627620 NXNQ6DKJ4 435 aa13.97□□□□□ -0.17
SCN8A-209ENST00000627620 PHLDB2Q86SQ0 1253 aa13.97□□□□□ -0.17
SCN8A-209ENST00000627620 ATG3Q9NT62 314 aa13.97□□□□□ -0.17
SCN8A-209ENST00000627620 STK38LQ9Y2H1 464 aa13.97□□□□□ -0.17
SCN8A-209ENST00000627620 PASKQ96RG2 1323 aa13.97□□□□□ -0.17
SCN8A-209ENST00000627620 KIF21AQ7Z4S6 1674 aa13.97□□□□□ -0.17
SCN8A-209ENST00000627620 A6NJR5 290 aa13.97□□□□□ -0.17
SCN8A-209ENST00000627620 MYO1FO00160 1098 aa13.97□□□□□ -0.17
SCN8A-209ENST00000627620 RPS6KC1Q96S38 1066 aa13.97□□□□□ -0.17
SCN8A-209ENST00000627620 ABCA5Q8WWZ7 1642 aa13.97□□□□□ -0.17
SCN8A-209ENST00000627620 H7C0C1 242 aa13.97□□□□□ -0.17
SCN8A-209ENST00000627620 EEF1GP26641 437 aaKnown RBP13.97□□□□□ -0.17
SCN8A-209ENST00000627620 ATP5OP48047 213 aa13.97□□□□□ -0.17
SCN8A-209ENST00000627620 NLRP10Q86W26 655 aa13.97□□□□□ -0.17
SCN8A-209ENST00000627620 MAP7D3Q8IWC1 876 aa13.97□□□□□ -0.17
SCN8A-209ENST00000627620 SCYL1Q96KG9 808 aa13.97□□□□□ -0.17
SCN8A-209ENST00000627620 ABCC12Q96J65 1359 aa13.97□□□□□ -0.17
SCN8A-209ENST00000627620 GCFC2P16383 781 aaKnown RBP13.97□□□□□ -0.17
SCN8A-209ENST00000627620 CCNA1P78396 465 aa13.97□□□□□ -0.17
SCN8A-209ENST00000627620 SATB1Q01826 763 aa13.97□□□□□ -0.17
SCN8A-209ENST00000627620 KIF23Q02241 960 aaPredicted RBP13.97□□□□□ -0.17
SCN8A-209ENST00000627620 AKT3Q9Y243 479 aa13.97□□□□□ -0.17
SCN8A-209ENST00000627620 PLEKHG1Q9ULL1 1385 aa13.97□□□□□ -0.17
SCN8A-209ENST00000627620 AFPP02771 609 aaKnown RBP13.96□□□□□ -0.17
SCN8A-209ENST00000627620 BMP3P12645 472 aa13.96□□□□□ -0.17
SCN8A-209ENST00000627620 TBC1D10BQ4KMP7 808 aaPredicted RBP13.96□□□□□ -0.17
SCN8A-209ENST00000627620 RNF10Q8N5U6 811 aaKnown RBP13.96□□□□□ -0.17
SCN8A-209ENST00000627620 HINFPQ9BQA5 517 aa13.96□□□□□ -0.17
SCN8A-209ENST00000627620 WDR11Q9BZH6 1224 aa13.96□□□□□ -0.17
SCN8A-209ENST00000627620 BCAP29Q9UHQ4 241 aa13.96□□□□□ -0.17
SCN8A-209ENST00000627620 BAIAP2L1Q9UHR4 511 aa13.96□□□□□ -0.17
SCN8A-209ENST00000627620 NUB1Q9Y5A7 615 aa13.96□□□□□ -0.17
SCN8A-209ENST00000627620 MMP1P03956 469 aa13.96□□□□□ -0.17
SCN8A-209ENST00000627620 KCNQ4P56696 695 aa13.96□□□□□ -0.17
SCN8A-209ENST00000627620 TTBK2Q6IQ55 1244 aa13.96□□□□□ -0.17
SCN8A-209ENST00000627620 FAM186BQ8IYM0 893 aa13.96□□□□□ -0.17
SCN8A-209ENST00000627620 ACCSQ96QU6 501 aa13.96□□□□□ -0.17
SCN8A-209ENST00000627620 KMT5AQ9NQR1 393 aa13.96□□□□□ -0.17
SCN8A-209ENST00000627620 MAD1L1Q9Y6D9 718 aa13.96□□□□□ -0.17
SCN8A-209ENST00000627620 WDR17Q8IZU2 1322 aa13.96□□□□□ -0.17
SCN8A-209ENST00000627620 hCG_1984214I3L0E3 225 aa13.96□□□□□ -0.17
SCN8A-209ENST00000627620 SAT1P21673 171 aa13.96□□□□□ -0.17
SCN8A-209ENST00000627620 CLNS1AP54105 237 aaKnown RBP13.96□□□□□ -0.17
SCN8A-209ENST00000627620 GUCY2DQ02846 1103 aa13.96□□□□□ -0.17
SCN8A-209ENST00000627620 ZNF713Q8N859 430 aaPredicted RBP13.96□□□□□ -0.17
SCN8A-209ENST00000627620 MIPOL1Q8TD10 442 aa13.96□□□□□ -0.17
SCN8A-209ENST00000627620 OSBP2Q969R2 916 aa13.96□□□□□ -0.17
SCN8A-209ENST00000627620 COA7Q96BR5 231 aa13.96□□□□□ -0.17
SCN8A-209ENST00000627620 CEP170Q5SW79 1584 aa13.96□□□□□ -0.17
SCN8A-209ENST00000627620 SH2B2O14492 632 aaPredicted RBP13.96□□□□□ -0.18
SCN8A-209ENST00000627620 PLCB4Q15147 1175 aa13.96□□□□□ -0.18
SCN8A-209ENST00000627620 DPCR1Q3MIW9 517 aa13.96□□□□□ -0.18
SCN8A-209ENST00000627620 TDRD7Q8NHU6 1098 aaKnown RBP13.96□□□□□ -0.18
SCN8A-209ENST00000627620 PRPF31Q8WWY3 499 aaKnown RBP13.96□□□□□ -0.18
SCN8A-209ENST00000627620 CACYBPQ9HB71 228 aaKnown RBP13.96□□□□□ -0.18
SCN8A-209ENST00000627620 ARHGAP42A6NI28 874 aa13.96□□□□□ -0.18
SCN8A-209ENST00000627620 INO80B-WBP1J3KQ70 363 aa13.96□□□□□ -0.18
SCN8A-209ENST00000627620 MIS18BP1Q6P0N0 1132 aa13.96□□□□□ -0.18
SCN8A-209ENST00000627620 ANKRD36BP1Q96IX9 119 aa13.96□□□□□ -0.18
SCN8A-209ENST00000627620 INO80BQ9C086 356 aaPredicted RBP13.96□□□□□ -0.18
SCN8A-209ENST00000627620 XPOTO43592 962 aaKnown RBP13.95□□□□□ -0.18
SCN8A-209ENST00000627620 ZNF500O60304 480 aaPredicted RBP13.95□□□□□ -0.18
SCN8A-209ENST00000627620 RBL2Q08999 1139 aa13.95□□□□□ -0.18
SCN8A-209ENST00000627620 NR5A1Q13285 461 aa13.95□□□□□ -0.18
SCN8A-209ENST00000627620 ZNF658Q5TYW1 1059 aaPredicted RBP13.95□□□□□ -0.18
SCN8A-209ENST00000627620 CCDC170Q8IYT3 715 aa13.95□□□□□ -0.18
SCN8A-209ENST00000627620 TRMT2AQ8IZ69 625 aaKnown RBP13.95□□□□□ -0.18
SCN8A-209ENST00000627620 UBE2Q2Q8WVN8 375 aa13.95□□□□□ -0.18
SCN8A-209ENST00000627620 JPH2Q9BR39 696 aaPredicted RBP13.95□□□□□ -0.18
SCN8A-209ENST00000627620 PTPN22Q9Y2R2 807 aa13.95□□□□□ -0.18
SCN8A-209ENST00000627620 CCDC38Q502W7 563 aa13.95□□□□□ -0.18
SCN8A-209ENST00000627620 FAM182BQ5T319 152 aa13.95□□□□□ -0.18
SCN8A-209ENST00000627620 RFX6Q8HWS3 928 aa13.95□□□□□ -0.18
SCN8A-209ENST00000627620 GRAMD1CQ8IYS0 662 aa13.95□□□□□ -0.18
SCN8A-209ENST00000627620 NACC1Q96RE7 527 aa13.95□□□□□ -0.18
SCN8A-209ENST00000627620 CCDC68Q9H2F9 335 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms